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Items: 1 to 50 of 72

1.

A shared core microbiome in soda lakes separated by large distances.

Zorz JK, Sharp C, Kleiner M, Gordon PMK, Pon RT, Dong X, Strous M.

Nat Commun. 2019 Sep 17;10(1):4230. doi: 10.1038/s41467-019-12195-5.

2.

An Algorithm Measuring Donor Cell-Free DNA in Plasma of Cellular and Solid Organ Transplant Recipients That Does Not Require Donor or Recipient Genotyping.

Gordon PM, Khan A, Sajid U, Chang N, Suresh V, Dimnik L, Lamont RE, Parboosingh JS, Martin SR, Pon RT, Weatherhead J, Wegener S, Isaac D, Greenway SC.

Front Cardiovasc Med. 2016 Sep 22;3:33. eCollection 2016.

3.

An siRNA-based functional genomics screen for the identification of regulators of ciliogenesis and ciliopathy genes.

Wheway G, Schmidts M, Mans DA, Szymanska K, Nguyen TT, Racher H, Phelps IG, Toedt G, Kennedy J, Wunderlich KA, Sorusch N, Abdelhamed ZA, Natarajan S, Herridge W, van Reeuwijk J, Horn N, Boldt K, Parry DA, Letteboer SJF, Roosing S, Adams M, Bell SM, Bond J, Higgins J, Morrison EE, Tomlinson DC, Slaats GG, van Dam TJP, Huang L, Kessler K, Giessl A, Logan CV, Boyle EA, Shendure J, Anazi S, Aldahmesh M, Al Hazzaa S, Hegele RA, Ober C, Frosk P, Mhanni AA, Chodirker BN, Chudley AE, Lamont R, Bernier FP, Beaulieu CL, Gordon P, Pon RT, Donahue C, Barkovich AJ, Wolf L, Toomes C, Thiel CT, Boycott KM, McKibbin M, Inglehearn CF; UK10K Consortium; University of Washington Center for Mendelian Genomics, Stewart F, Omran H, Huynen MA, Sergouniotis PI, Alkuraya FS, Parboosingh JS, Innes AM, Willoughby CE, Giles RH, Webster AR, Ueffing M, Blacque O, Gleeson JG, Wolfrum U, Beales PL, Gibson T, Doherty D, Mitchison HM, Roepman R, Johnson CA.

Nat Cell Biol. 2015 Aug;17(8):1074-1087. doi: 10.1038/ncb3201. Epub 2015 Jul 13.

4.

Attachment of nucleosides and other linkers to solid-phase supports for oligonucleotide synthesis.

Guzaev AP, Pon RT.

Curr Protoc Nucleic Acid Chem. 2013 Mar;Chapter 3:Unit 3.2. doi: 10.1002/0471142700.nc0302s52.

PMID:
23512695
5.

Nucleoside phosphoramidites containing cleavable linkers.

Pon RT.

Curr Protoc Nucleic Acid Chem. 2006 Jan;Chapter 3:Unit 3.12. doi: 10.1002/0471142700.nc0312s23.

PMID:
18428954
6.

Attachment of nucleosides to solid-phase supports.

Pon RT.

Curr Protoc Nucleic Acid Chem. 2001 May;Chapter 3:Unit 3.2. doi: 10.1002/0471142700.nc0302s00.

PMID:
18428843
7.

Solid-phase supports for oligonucleotide synthesis.

Pon RT.

Curr Protoc Nucleic Acid Chem. 2001 May;Chapter 3:Unit 3.1. doi: 10.1002/0471142700.nc0301s00.

PMID:
18428842
8.

Large-scale synthesis of "Cpep" RNA monomers and their application in automated RNA synthesis.

Pon RT, Yu S, Prabhavalkar T, Mishra T, Kulkarni B, Sanghvi YS.

Nucleosides Nucleotides Nucleic Acids. 2005;24(5-7):777-81.

PMID:
16248035
9.

Tandem oligonucleotide synthesis using linker phosphoramidites.

Pon RT, Yu S.

Nucleic Acids Res. 2005 Apr 6;33(6):1940-8. Print 2005.

10.

Solution structure of a DNA duplex containing an alpha-anomeric adenosine: insights into substrate recognition by endonuclease IV.

Aramini JM, Cleaver SH, Pon RT, Cunningham RP, Germann MW.

J Mol Biol. 2004 Apr 16;338(1):77-91.

PMID:
15050824
11.
12.

Structural basis for topoisomerase I inhibition by nucleoside analogs.

Gmeiner WH, Yu S, Pon RT, Pourquier P, Pommier Y.

Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):653-8. Review.

PMID:
14565246
13.

Tandem oligonucleotide synthesis using linker (First Base) phosphoramidites.

Pon RT, Yu S.

Nucleic Acids Res Suppl. 2002;(2):1-2.

PMID:
12903075
14.

Gemcitabine (2',2'-difluoro-2'-deoxycytidine), an antimetabolite that poisons topoisomerase I.

Pourquier P, Gioffre C, Kohlhagen G, Urasaki Y, Goldwasser F, Hertel LW, Yu S, Pon RT, Gmeiner WH, Pommier Y.

Clin Cancer Res. 2002 Aug;8(8):2499-504.

15.
16.

Solution structure of an arabinonucleic acid (ANA)/RNA duplex in a chimeric hairpin: comparison with 2'-fluoro-ANA/RNA and DNA/RNA hybrids.

Denisov AY, Noronha AM, Wilds CJ, Trempe JF, Pon RT, Gehring K, Damha MJ.

Nucleic Acids Res. 2001 Nov 1;29(21):4284-93.

17.

Multiple oligonucleotide synthesis in tandem on solid-phase supports for small and large scale synthesis.

Pon RT, Yu S, Sanghvi YS.

Nucleosides Nucleotides Nucleic Acids. 2001 Apr-Jul;20(4-7):985-9.

PMID:
11563160
18.

Properties of arabinonucleic acids (ANA & 20'F-ANA): implications for the design of antisense therapeutics that invoke RNase H cleavage of RNA.

Damha MJ, Noronha AM, Wilds CJ, Trempe JF, Denisov A, Pon RT, Gehring K.

Nucleosides Nucleotides Nucleic Acids. 2001 Apr-Jul;20(4-7):429-40.

PMID:
11563058
19.

NMR solution structure of an oligonucleotide hairpin with a 2'F-ANA/RNA stem: implications for RNase H specificity toward DNA/RNA hybrid duplexes.

Trempe JF, Wilds CJ, Denisov AY, Pon RT, Damha MJ, Gehring K.

J Am Chem Soc. 2001 May 30;123(21):4896-903.

PMID:
11457316
20.

Solid-phase oligonucleotide synthesis and flow cytometric analysis with microspheres encoded with covalently attached fluorophores.

Nanthakumar A, Pon RT, Mazumder A, Yu S, Watson A.

Bioconjug Chem. 2000 Mar-Apr;11(2):282-8.

PMID:
10725106
21.
22.

Design strategies and performance of custom DNA sequencing primers.

Buck GA, Fox JW, Gunthorpe M, Hager KM, Naeve CW, Pon RT, Adams PS, Rush J.

Biotechniques. 1999 Sep;27(3):528-36.

23.

Cytotoxicity and in-vivo tolerance of FdUMP[10]: a novel pro-drug of the TS inhibitory nucleotide FdUMP.

Gmeiner WH, Skradis A, Pon RT, Liu J.

Nucleosides Nucleotides. 1999 Jun-Jul;18(6-7):1729-30.

PMID:
10474257
24.

Cytarabine-induced destabilization and bending of a model Okazaki fragment.

Gmeiner WH, Skradis A, Pon RT, Liu J.

Nucleosides Nucleotides. 1999 Jun-Jul;18(6-7):1577-8.

PMID:
10474234
26.

Cytarabine-induced destabilization of a model Okazaki fragment.

Gmeiner WH, Skradis A, Pon RT, Liu J.

Nucleic Acids Res. 1998 May 15;26(10):2359-65.

29.

Solution structures of 5-fluorouracil-substituted DNA and RNA decamer duplexes.

Sahasrabudhe PV, Pon RT, Gmeiner WH.

Biochemistry. 1996 Oct 22;35(42):13597-608.

PMID:
8885839
30.

Multi-facility survey of oligonucleotide synthesis and an examination of the performance of unpurified primers in automated DNA sequencing.

Pon RT, Buck GA, Hager KM, Naeve CW, Niece RL, Robertson M, Smith AJ.

Biotechniques. 1996 Oct;21(4):680-5.

PMID:
8891221
31.

Structure of a DNA duplex that contains alpha-anomeric nucleotides and 3'-3' and 5'-5' phosphodiester linkages: coexistence of parallel and antiparallel DNA.

Aramini JM, Kalisch BW, Pon RT, van de Sande JH, Germann MW.

Biochemistry. 1996 Jul 23;35(29):9355-65.

PMID:
8755713
32.

Studies on cooperative binding of an extended distamycin A analogue in the minor groove of DNA by NMR spectroscopy.

Yang Y, Chen YH, Pon RT, Lown JW.

Biochem Biophys Res Commun. 1996 May 24;222(3):764-9.

PMID:
8651919
33.
34.

Effects of site-specific substitution of 5-fluorouridine on the stabilities of duplex DNA and RNA.

Sahasrabudhe PV, Pon RT, Gmeiner WH.

Nucleic Acids Res. 1995 Oct 11;23(19):3916-21.

35.
36.

Accuracy of automated DNA sequencing: a multi-laboratory comparison of sequencing results.

Naeve CW, Buck GA, Niece RL, Pon RT, Robertson M, Smith AJ.

Biotechniques. 1995 Sep;19(3):448-53.

PMID:
7495559
37.

Interaction of the cobalt complex of a bleomycin functional model with d(CGCAATTGCG)2: evidence of minor groove binding by 2D NMR methods.

Yang Y, Huang L, Pon RT, Lown JW.

Biochem Biophys Res Commun. 1995 Jul 26;212(3):995-1000.

PMID:
7542892
38.

A survey of nucleic acid services in core laboratories.

Pon RT, Buck GA, Niece RL, Robertson M, Smith AJ, Spicer E.

Biotechniques. 1994 Sep;17(3):526-34.

PMID:
7818907
39.

Solid-phase supports for oligonucleotide synthesis.

Pon RT.

Methods Mol Biol. 1993;20:465-96. No abstract available.

PMID:
8242147
40.

Inhibition of cell adhesion to plastic substratum by phosphorothioate oligonucleotide.

Watson PH, Pon RT, Shiu RP.

Exp Cell Res. 1992 Oct;202(2):391-7.

PMID:
1397092
41.

Rapid DNA fingerprinting to control for specimen errors in HIV testing by the polymerase chain reaction.

Cassol S, Rudnik J, Salas T, Montpetit M, Pon RT, Sy CT, Read S, Major C, O'Shaughnessy MV.

Mol Cell Probes. 1992 Aug;6(4):327-31.

PMID:
1528202
42.

A 1H-NMR study of the DNA binding characteristics of thioformyldistamycin, an amide isosteric lexitropsin.

Singh MP, Kumar S, Joseph T, Pon RT, Lown JW.

Biochemistry. 1992 Jul 21;31(28):6453-61.

PMID:
1321661
45.

Conformational and functional analysis of the C-terminal globular head of the reovirus cell attachment protein.

Duncan R, Horne D, Strong JE, Leone G, Pon RT, Yeung MC, Lee PW.

Virology. 1991 Jun;182(2):810-9.

PMID:
2024499
46.

Length-dependent formation of parallel-stranded DNA in alternating AT segments.

Germann MW, Kalisch BW, Pon RT, van de Sande JH.

Biochemistry. 1990 Oct 9;29(40):9426-32.

PMID:
2248956
48.

Molecular recognition and binding of a GC site-avoiding thiazole-lexitropsin to the decadeoxyribonucleotide d-[CGCAATTGCG]2: 1H-NMR evidence for thiazole intercalation.

Kumar S, Jaseja M, Zimmermann J, Yadagiri B, Pon RT, Sapse AM, Lown JW.

J Biomol Struct Dyn. 1990 Aug;8(1):99-121.

PMID:
2177339
49.
50.

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