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Items: 28

1.

Natural re-colonization and admixture of wolves (Canis lupus) in the US Pacific Northwest: challenges for the protection and management of rare and endangered taxa.

Hendricks SA, Schweizer RM, Harrigan RJ, Pollinger JP, Paquet PC, Darimont CT, Adams JR, Waits LP, vonHoldt BM, Hohenlohe PA, Wayne RK.

Heredity (Edinb). 2019 Feb;122(2):133-149. doi: 10.1038/s41437-018-0094-x. Epub 2018 Jun 7.

PMID:
29880893
2.

Interactions between demography, genetics, and landscape connectivity increase extinction probability for a small population of large carnivores in a major metropolitan area.

Benson JF, Mahoney PJ, Sikich JA, Serieys LE, Pollinger JP, Ernest HB, Riley SP.

Proc Biol Sci. 2016 Aug 31;283(1837). pii: 20160957. doi: 10.1098/rspb.2016.0957.

3.

Whole-genome sequence analysis shows that two endemic species of North American wolf are admixtures of the coyote and gray wolf.

vonHoldt BM, Cahill JA, Fan Z, Gronau I, Robinson J, Pollinger JP, Shapiro B, Wall J, Wayne RK.

Sci Adv. 2016 Jul 27;2(7):e1501714. doi: 10.1126/sciadv.1501714. eCollection 2016 Jul.

4.

Admixture mapping identifies introgressed genomic regions in North American canids.

vonHoldt BM, Kays R, Pollinger JP, Wayne RK.

Mol Ecol. 2016 Jun;25(11):2443-53. doi: 10.1111/mec.13667. Epub 2016 May 12.

PMID:
27106273
5.

Disease and freeways drive genetic change in urban bobcat populations.

Serieys LE, Lea A, Pollinger JP, Riley SP, Wayne RK.

Evol Appl. 2015 Jan;8(1):75-92. doi: 10.1111/eva.12226. Epub 2014 Dec 2.

6.

Individual behaviors dominate the dynamics of an urban mountain lion population isolated by roads.

Riley SP, Serieys LE, Pollinger JP, Sikich JA, Dalbeck L, Wayne RK, Ernest HB.

Curr Biol. 2014 Sep 8;24(17):1989-94. doi: 10.1016/j.cub.2014.07.029. Epub 2014 Aug 14.

7.

Hypoxia adaptations in the grey wolf (Canis lupus chanco) from Qinghai-Tibet Plateau.

Zhang W, Fan Z, Han E, Hou R, Zhang L, Galaverni M, Huang J, Liu H, Silva P, Li P, Pollinger JP, Du L, Zhang X, Yue B, Wayne RK, Zhang Z.

PLoS Genet. 2014 Jul 31;10(7):e1004466. doi: 10.1371/journal.pgen.1004466. eCollection 2014 Jul.

8.

Intraspecific morphological and genetic variation of common species predicts ranges of threatened ones.

Fuller TL, Thomassen HA, Peralvo M, Buermann W, Milá B, Kieswetter CM, Jarrín-V P, Devitt SE, Mason E, Schweizer RM, Schlunegger J, Chan J, Wang O, Schneider CJ, Pollinger JP, Saatchi S, Graham CH, Wayne RK, Smith TB.

Proc Biol Sci. 2013 Apr 17;280(1760):20130423. doi: 10.1098/rspb.2013.0423. Print 2013 Jun 7. Erratum in: Proc Biol Sci. 2013 Jul 22;280(1763):20131237.

9.

Identification of recent hybridization between gray wolves and domesticated dogs by SNP genotyping.

vonHoldt BM, Pollinger JP, Earl DA, Parker HG, Ostrander EA, Wayne RK.

Mamm Genome. 2013 Feb;24(1-2):80-8. doi: 10.1007/s00335-012-9432-0. Epub 2012 Oct 12.

PMID:
23064780
10.

Pandemic A/H1N1/2009 influenza virus in swine, Cameroon, 2010.

Njabo KY, Fuller TL, Chasar A, Pollinger JP, Cattoli G, Terregino C, Monne I, Reynes JM, Njouom R, Smith TB.

Vet Microbiol. 2012 Apr 23;156(1-2):189-92. doi: 10.1016/j.vetmic.2011.09.003. Epub 2011 Sep 12.

11.

A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids.

vonHoldt BM, Pollinger JP, Earl DA, Knowles JC, Boyko AR, Parker H, Geffen E, Pilot M, Jedrzejewski W, Jedrzejewska B, Sidorovich V, Greco C, Randi E, Musiani M, Kays R, Bustamante CD, Ostrander EA, Novembre J, Wayne RK.

Genome Res. 2011 Aug;21(8):1294-305. doi: 10.1101/gr.116301.110. Epub 2011 May 12.

12.

Mapping evolutionary process: a multi-taxa approach to conservation prioritization.

Thomassen HA, Fuller T, Buermann W, Milá B, Kieswetter CM, Jarrín-V P, Cameron SE, Mason E, Schweizer R, Schlunegger J, Chan J, Wang O, Peralvo M, Schneider CJ, Graham CH, Pollinger JP, Saatchi S, Wayne RK, Smith TB.

Evol Appl. 2011 Mar;4(2):397-413. doi: 10.1111/j.1752-4571.2010.00172.x.

13.

A novel assessment of population structure and gene flow in grey wolf populations of the Northern Rocky Mountains of the United States.

vonHoldt BM, Stahler DR, Bangs EE, Smith DW, Jimenez MD, Mack CM, Niemeyer CC, Pollinger JP, Wayne RK.

Mol Ecol. 2010 Oct;19(20):4412-27. doi: 10.1111/j.1365-294X.2010.04769.x. Epub 2010 Aug 16.

PMID:
20723068
14.

Mapping the risk of avian influenza in wild birds in the US.

Fuller TL, Saatchi SS, Curd EE, Toffelmier E, Thomassen HA, Buermann W, DeSante DF, Nott MP, Saracco JF, Ralph C, Alexander JD, Pollinger JP, Smith TB.

BMC Infect Dis. 2010 Jun 23;10:187. doi: 10.1186/1471-2334-10-187.

15.

Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication.

Vonholdt BM, Pollinger JP, Lohmueller KE, Han E, Parker HG, Quignon P, Degenhardt JD, Boyko AR, Earl DA, Auton A, Reynolds A, Bryc K, Brisbin A, Knowles JC, Mosher DS, Spady TC, Elkahloun A, Geffen E, Pilot M, Jedrzejewski W, Greco C, Randi E, Bannasch D, Wilton A, Shearman J, Musiani M, Cargill M, Jones PG, Qian Z, Huang W, Ding ZL, Zhang YP, Bustamante CD, Ostrander EA, Novembre J, Wayne RK.

Nature. 2010 Apr 8;464(7290):898-902. doi: 10.1038/nature08837. Epub 2010 Mar 17.

16.

Modeling environmentally associated morphological and genetic variation in a rainforest bird, and its application to conservation prioritization.

Thomassen HA, Buermann W, Milá B, Graham CH, Cameron SE, Schneider CJ, Pollinger JP, Saatchi S, Wayne RK, Smith TB.

Evol Appl. 2010 Jan;3(1):1-16. doi: 10.1111/j.1752-4571.2009.00093.x. Epub 2009 Jul 16.

17.

Evolutionary history of the Falklands wolf.

Slater GJ, Thalmann O, Leonard JA, Schweizer RM, Koepfli KP, Pollinger JP, Rawlence NJ, Austin JJ, Cooper A, Wayne RK.

Curr Biol. 2009 Nov 3;19(20):R937-8. doi: 10.1016/j.cub.2009.09.018. No abstract available.

18.

Characterization of 12 polymorphic microsatellite markers for a facultatively eusocial sweat bee (Megalopta genalis).

Kapheim KM, Pollinger JP, Wcislo WT, Wayne RK.

Mol Ecol Resour. 2009 Nov;9(6):1527-9. doi: 10.1111/j.1755-0998.2009.02693.x. Epub 2009 Apr 15.

PMID:
21564949
19.

Landscape genetics of California mule deer (Odocoileus hemionus): the roles of ecological and historical factors in generating differentiation.

Pease KM, Freedman AH, Pollinger JP, McCormack JE, Buermann W, Rodzen J, Banks J, Meredith E, Bleich VC, Schaefer RJ, Jones K, Wayne RK.

Mol Ecol. 2009 May;18(9):1848-62. doi: 10.1111/j.1365-294X.2009.04112.x. Epub 2009 Mar 12.

PMID:
19302356
20.

Characterization of 15 tetranucleotide microsatellite markers in the ringtail (Bassariscus astutus).

Schweizer RM, Roemer GW, Pollinger JP, Wayne RK.

Mol Ecol Resour. 2009 Jan;9(1):210-2. doi: 10.1111/j.1755-0998.2008.02374.x. Epub 2008 Oct 22.

PMID:
21564605
21.

Extensive population genetic structure in the giraffe.

Brown DM, Brenneman RA, Koepfli KP, Pollinger JP, Milá B, Georgiadis NJ, Louis EE Jr, Grether GF, Jacobs DK, Wayne RK.

BMC Biol. 2007 Dec 21;5:57.

22.

The genealogy and genetic viability of reintroduced Yellowstone grey wolves.

Vonholdt BM, Stahler DR, Smith DW, Earl DA, Pollinger JP, Wayne RK.

Mol Ecol. 2008 Jan;17(1):252-74. Epub 2007 Sep 18.

PMID:
17877715
23.

Evolutionary consequences of human disturbance in a rainforest bird species from Central Africa.

Smith TB, Milá B, Grether GF, Slabbekoorn H, Sepil I, Buermann W, Saatchi S, Pollinger JP.

Mol Ecol. 2008 Jan;17(1):58-71. Epub 2007 Sep 12.

PMID:
17868295
24.

The role of geography and ecology in shaping the phylogeography of the speckled hummingbird (Adelomyia melanogenys) in Ecuador.

Chaves JA, Pollinger JP, Smith TB, LeBuhn G.

Mol Phylogenet Evol. 2007 Jun;43(3):795-807. Epub 2006 Nov 17.

PMID:
17208464
25.

Low-coverage vaccination strategies for the conservation of endangered species.

Haydon DT, Randall DA, Matthews L, Knobel DL, Tallents LA, Gravenor MB, Williams SD, Pollinger JP, Cleaveland S, Woolhouse ME, Sillero-Zubiri C, Marino J, Macdonald DW, Laurenson MK.

Nature. 2006 Oct 12;443(7112):692-5.

PMID:
17036003
26.

A southern California freeway is a physical and social barrier to gene flow in carnivores.

Riley SP, Pollinger JP, Sauvajot RM, York EC, Bromley C, Fuller TK, Wayne RK.

Mol Ecol. 2006 Jun;15(7):1733-41.

PMID:
16689893
27.

Genome sequence, comparative analysis and haplotype structure of the domestic dog.

Lindblad-Toh K, Wade CM, Mikkelsen TS, Karlsson EK, Jaffe DB, Kamal M, Clamp M, Chang JL, Kulbokas EJ 3rd, Zody MC, Mauceli E, Xie X, Breen M, Wayne RK, Ostrander EA, Ponting CP, Galibert F, Smith DR, DeJong PJ, Kirkness E, Alvarez P, Biagi T, Brockman W, Butler J, Chin CW, Cook A, Cuff J, Daly MJ, DeCaprio D, Gnerre S, Grabherr M, Kellis M, Kleber M, Bardeleben C, Goodstadt L, Heger A, Hitte C, Kim L, Koepfli KP, Parker HG, Pollinger JP, Searle SM, Sutter NB, Thomas R, Webber C, Baldwin J, Abebe A, Abouelleil A, Aftuck L, Ait-Zahra M, Aldredge T, Allen N, An P, Anderson S, Antoine C, Arachchi H, Aslam A, Ayotte L, Bachantsang P, Barry A, Bayul T, Benamara M, Berlin A, Bessette D, Blitshteyn B, Bloom T, Blye J, Boguslavskiy L, Bonnet C, Boukhgalter B, Brown A, Cahill P, Calixte N, Camarata J, Cheshatsang Y, Chu J, Citroen M, Collymore A, Cooke P, Dawoe T, Daza R, Decktor K, DeGray S, Dhargay N, Dooley K, Dooley K, Dorje P, Dorjee K, Dorris L, Duffey N, Dupes A, Egbiremolen O, Elong R, Falk J, Farina A, Faro S, Ferguson D, Ferreira P, Fisher S, FitzGerald M, Foley K, Foley C, Franke A, Friedrich D, Gage D, Garber M, Gearin G, Giannoukos G, Goode T, Goyette A, Graham J, Grandbois E, Gyaltsen K, Hafez N, Hagopian D, Hagos B, Hall J, Healy C, Hegarty R, Honan T, Horn A, Houde N, Hughes L, Hunnicutt L, Husby M, Jester B, Jones C, Kamat A, Kanga B, Kells C, Khazanovich D, Kieu AC, Kisner P, Kumar M, Lance K, Landers T, Lara M, Lee W, Leger JP, Lennon N, Leuper L, LeVine S, Liu J, Liu X, Lokyitsang Y, Lokyitsang T, Lui A, Macdonald J, Major J, Marabella R, Maru K, Matthews C, McDonough S, Mehta T, Meldrim J, Melnikov A, Meneus L, Mihalev A, Mihova T, Miller K, Mittelman R, Mlenga V, Mulrain L, Munson G, Navidi A, Naylor J, Nguyen T, Nguyen N, Nguyen C, Nguyen T, Nicol R, Norbu N, Norbu C, Novod N, Nyima T, Olandt P, O'Neill B, O'Neill K, Osman S, Oyono L, Patti C, Perrin D, Phunkhang P, Pierre F, Priest M, Rachupka A, Raghuraman S, Rameau R, Ray V, Raymond C, Rege F, Rise C, Rogers J, Rogov P, Sahalie J, Settipalli S, Sharpe T, Shea T, Sheehan M, Sherpa N, Shi J, Shih D, Sloan J, Smith C, Sparrow T, Stalker J, Stange-Thomann N, Stavropoulos S, Stone C, Stone S, Sykes S, Tchuinga P, Tenzing P, Tesfaye S, Thoulutsang D, Thoulutsang Y, Topham K, Topping I, Tsamla T, Vassiliev H, Venkataraman V, Vo A, Wangchuk T, Wangdi T, Weiand M, Wilkinson J, Wilson A, Yadav S, Yang S, Yang X, Young G, Yu Q, Zainoun J, Zembek L, Zimmer A, Lander ES.

Nature. 2005 Dec 8;438(7069):803-19.

PMID:
16341006
28.

Selective sweep mapping of genes with large phenotypic effects.

Pollinger JP, Bustamante CD, Fledel-Alon A, Schmutz S, Gray MM, Wayne RK.

Genome Res. 2005 Dec;15(12):1809-19.

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