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Items: 1 to 50 of 323

1.

Novel insights from uncultivated genomes of the global human gut microbiome.

Nayfach S, Shi ZJ, Seshadri R, Pollard KS, Kyrpides N.

Nature. 2019 Mar 13. doi: 10.1038/s41586-019-1058-x. [Epub ahead of print]

PMID:
30867587
2.

Preliminary piloting and validation of a questionnaire identifying basic clinical skills practised by research nurses.

Kirkpatrick S, Harding S, Pollard K, Tacchi P.

Br J Nurs. 2019 Feb 14;28(3):162-167. doi: 10.12968/bjon.2019.28.3.162.

PMID:
30746968
3.

Mercury-induced inflammation and autoimmunity.

Pollard KM, Cauvi DM, Toomey CB, Hultman P, Kono DH.

Biochim Biophys Acta Gen Subj. 2019 Feb 10. pii: S0304-4165(19)30027-3. doi: 10.1016/j.bbagen.2019.02.001. [Epub ahead of print] Review.

PMID:
30742953
4.

Toward unrestricted use of public genomic data.

Amann RI, Baichoo S, Blencowe BJ, Bork P, Borodovsky M, Brooksbank C, Chain PSG, Colwell RR, Daffonchio DG, Danchin A, de Lorenzo V, Dorrestein PC, Finn RD, Fraser CM, Gilbert JA, Hallam SJ, Hugenholtz P, Ioannidis JPA, Jansson JK, Kim JF, Klenk HP, Klotz MG, Knight R, Konstantinidis KT, Kyrpides NC, Mason CE, McHardy AC, Meyer F, Ouzounis CA, Patrinos AAN, Podar M, Pollard KS, Ravel J, Muñoz AR, Roberts RJ, Rosselló-Móra R, Sansone SA, Schloss PD, Schriml LM, Setubal JC, Sorek R, Stevens RL, Tiedje JM, Turjanski A, Tyson GW, Ussery DW, Weinstock GM, White O, Whitman WB, Xenarios I.

Science. 2019 Jan 25;363(6425):350-352. doi: 10.1126/science.aaw1280. No abstract available.

5.

Evolutionary dynamics of bacteria in the gut microbiome within and across hosts.

Garud NR, Good BH, Hallatschek O, Pollard KS.

PLoS Biol. 2019 Jan 23;17(1):e3000102. doi: 10.1371/journal.pbio.3000102. eCollection 2019 Jan.

6.

A De Novo Shape Motif Discovery Algorithm Reveals Preferences of Transcription Factors for DNA Shape Beyond Sequence Motifs.

Samee MAH, Bruneau BG, Pollard KS.

Cell Syst. 2019 Jan 23;8(1):27-42.e6. doi: 10.1016/j.cels.2018.12.001. Epub 2019 Jan 16.

7.

Chromatin features constrain structural variation across evolutionary timescales.

Fudenberg G, Pollard KS.

Proc Natl Acad Sci U S A. 2019 Feb 5;116(6):2175-2180. doi: 10.1073/pnas.1808631116. Epub 2019 Jan 18.

8.

Most chromatin interactions are not in linkage disequilibrium.

Whalen S, Pollard KS.

Genome Res. 2019 Mar;29(3):334-343. doi: 10.1101/gr.238022.118. Epub 2019 Jan 7.

9.

Comparative Flavivirus-Host Protein Interaction Mapping Reveals Mechanisms of Dengue and Zika Virus Pathogenesis.

Shah PS, Link N, Jang GM, Sharp PP, Zhu T, Swaney DL, Johnson JR, Von Dollen J, Ramage HR, Satkamp L, Newton B, Hüttenhain R, Petit MJ, Baum T, Everitt A, Laufman O, Tassetto M, Shales M, Stevenson E, Iglesias GN, Shokat L, Tripathi S, Balasubramaniam V, Webb LG, Aguirre S, Willsey AJ, Garcia-Sastre A, Pollard KS, Cherry S, Gamarnik AV, Marazzi I, Taunton J, Fernandez-Sesma A, Bellen HJ, Andino R, Krogan NJ.

Cell. 2018 Dec 13;175(7):1931-1945.e18. doi: 10.1016/j.cell.2018.11.028.

PMID:
30550790
10.

Integrating host response and unbiased microbe detection for lower respiratory tract infection diagnosis in critically ill adults.

Langelier C, Kalantar KL, Moazed F, Wilson MR, Crawford ED, Deiss T, Belzer A, Bolourchi S, Caldera S, Fung M, Jauregui A, Malcolm K, Lyden A, Khan L, Vessel K, Quan J, Zinter M, Chiu CY, Chow ED, Wilson J, Miller S, Matthay MA, Pollard KS, Christenson S, Calfee CS, DeRisi JL.

Proc Natl Acad Sci U S A. 2018 Dec 26;115(52):E12353-E12362. doi: 10.1073/pnas.1809700115. Epub 2018 Nov 27.

11.

Existing Climate Change Will Lead to Pronounced Shifts in the Diversity of Soil Prokaryotes.

Ladau J, Shi Y, Jing X, He JS, Chen L, Lin X, Fierer N, Gilbert JA, Pollard KS, Chu H.

mSystems. 2018 Oct 23;3(5). pii: e00167-18. doi: 10.1128/mSystems.00167-18. eCollection 2018 Sep-Oct.

12.

A most wanted list of conserved microbial protein families with no known domains.

Wyman SK, Avila-Herrera A, Nayfach S, Pollard KS.

PLoS One. 2018 Oct 17;13(10):e0205749. doi: 10.1371/journal.pone.0205749. eCollection 2018.

13.

Preparing midwifery students for traumatic workplace events: Findings from the POPPY (programme for the prevention of posttraumatic stress disorder in midwifery) feasibility study.

Spiby H, Sheen K, Collinge S, Maxwell C, Pollard K, Slade P.

Nurse Educ Today. 2018 Dec;71:226-232. doi: 10.1016/j.nedt.2018.09.024. Epub 2018 Sep 29.

PMID:
30317160
14.

Phylogeny-corrected identification of microbial gene families relevant to human gut colonization.

Bradley PH, Nayfach S, Pollard KS.

PLoS Comput Biol. 2018 Aug 9;14(8):e1006242. doi: 10.1371/journal.pcbi.1006242. eCollection 2018 Aug.

15.
16.

Developmental Loci Harbor Clusters of Accelerated Regions That Evolved Independently in Ape Lineages.

Kostka D, Holloway AK, Pollard KS.

Mol Biol Evol. 2018 Aug 1;35(8):2034-2045. doi: 10.1093/molbev/msy109.

17.

American Gut: an Open Platform for Citizen Science Microbiome Research.

McDonald D, Hyde E, Debelius JW, Morton JT, Gonzalez A, Ackermann G, Aksenov AA, Behsaz B, Brennan C, Chen Y, DeRight Goldasich L, Dorrestein PC, Dunn RR, Fahimipour AK, Gaffney J, Gilbert JA, Gogul G, Green JL, Hugenholtz P, Humphrey G, Huttenhower C, Jackson MA, Janssen S, Jeste DV, Jiang L, Kelley ST, Knights D, Kosciolek T, Ladau J, Leach J, Marotz C, Meleshko D, Melnik AV, Metcalf JL, Mohimani H, Montassier E, Navas-Molina J, Nguyen TT, Peddada S, Pevzner P, Pollard KS, Rahnavard G, Robbins-Pianka A, Sangwan N, Shorenstein J, Smarr L, Song SJ, Spector T, Swafford AD, Thackray VG, Thompson LR, Tripathi A, Vázquez-Baeza Y, Vrbanac A, Wischmeyer P, Wolfe E, Zhu Q; American Gut Consortium , Knight R.

mSystems. 2018 May 15;3(3). pii: e00031-18. doi: 10.1128/mSystems.00031-18. eCollection 2018 May-Jun.

18.

Effect of an Educational Intervention on Medical Student Scripting and Patient Satisfaction: A Randomized Trial.

Pettit KE, Turner JS, Pollard KA, Buente BB, Humbert AJ, Perkins AJ, Hobgood CD, Kline JA.

West J Emerg Med. 2018 May;19(3):585-592. doi: 10.5811/westjem.2018.1.35992. Epub 2018 Mar 8.

19.

Silicosis and Silica-Induced Autoimmunity in the Diversity Outbred Mouse.

Mayeux JM, Escalante GM, Christy JM, Pawar RD, Kono DH, Pollard KM.

Front Immunol. 2018 Apr 26;9:874. doi: 10.3389/fimmu.2018.00874. eCollection 2018.

20.

Previous estradiol treatment in ovariectomized mice provides lasting enhancement of memory and brain estrogen receptor activity.

Pollard KJ, Wartman HD, Daniel JM.

Horm Behav. 2018 Jun;102:76-84. doi: 10.1016/j.yhbeh.2018.05.002. Epub 2018 May 12. No abstract available.

PMID:
29742445
21.

Measuring quality in community nursing: a mixed-methods study.

Horrocks S, Pollard K, Duncan L, Petsoulas C, Gibbard E, Cook J, McDonald R, Wye L, Allen P, Husband P, Harland L, Cameron A, Salisbury C.

Southampton (UK): NIHR Journals Library; 2018 Apr.

22.

Environmental Xenobiotic Exposure and Autoimmunity.

Pollard KM, Christy JM, Cauvi DM, Kono DH.

Curr Opin Toxicol. 2018 Aug;10:15-22. doi: 10.1016/j.cotox.2017.11.009. Epub 2017 Nov 21.

PMID:
29503968
23.

Developmental constraint through negative pleiotropy in the zygomatic arch.

Percival CJ, Green R, Roseman CC, Gatti DM, Morgan JL, Murray SA, Donahue LR, Mayeux JM, Pollard KM, Hua K, Pomp D, Marcucio R, Hallgrímsson B.

Evodevo. 2018 Jan 27;9:3. doi: 10.1186/s13227-018-0092-3. eCollection 2018.

24.

Seasonal Association of Pediatric Functional Abdominal Pain Disorders and Anxiety.

Pollard KL, Campbell C, Squires M, Palsson O, van Tilburg MAL.

J Pediatr Gastroenterol Nutr. 2018 Jul;67(1):18-22. doi: 10.1097/MPG.0000000000001886.

PMID:
29287016
25.

Hyaluronic acid 35 normalizes TLR4 signaling in Kupffer cells from ethanol-fed rats via regulation of microRNA291b and its target Tollip.

Saikia P, Roychowdhury S, Bellos D, Pollard KA, McMullen MR, McCullough RL, McCullough AJ, Gholam P, de la Motte C, Nagy LE.

Sci Rep. 2017 Nov 15;7(1):15671. doi: 10.1038/s41598-017-15760-4.

26.

The Epstein-Barr virus episome maneuvers between nuclear chromatin compartments during reactivation.

Moquin SA, Thomas S, Whalen S, Warburton A, Fernandez SG, McBride AA, Pollard KS, Miranda JJL.

J Virol. 2017 Nov 15. pii: JVI.01413-17. doi: 10.1128/JVI.01413-17. [Epub ahead of print]

27.

A communal catalogue reveals Earth's multiscale microbial diversity.

Thompson LR, Sanders JG, McDonald D, Amir A, Ladau J, Locey KJ, Prill RJ, Tripathi A, Gibbons SM, Ackermann G, Navas-Molina JA, Janssen S, Kopylova E, Vázquez-Baeza Y, González A, Morton JT, Mirarab S, Zech Xu Z, Jiang L, Haroon MF, Kanbar J, Zhu Q, Jin Song S, Kosciolek T, Bokulich NA, Lefler J, Brislawn CJ, Humphrey G, Owens SM, Hampton-Marcell J, Berg-Lyons D, McKenzie V, Fierer N, Fuhrman JA, Clauset A, Stevens RL, Shade A, Pollard KS, Goodwin KD, Jansson JK, Gilbert JA, Knight R; Earth Microbiome Project Consortium.

Nature. 2017 Nov 23;551(7681):457-463. doi: 10.1038/nature24621. Epub 2017 Nov 1.

28.

Induction of Systemic Autoimmunity by a Xenobiotic Requires Endosomal TLR Trafficking and Signaling from the Late Endosome and Endolysosome but Not Type I IFN.

Pollard KM, Escalante GM, Huang H, Haraldsson KM, Hultman P, Christy JM, Pawar RD, Mayeux JM, Gonzalez-Quintial R, Baccala R, Beutler B, Theofilopoulos AN, Kono DH.

J Immunol. 2017 Dec 1;199(11):3739-3747. doi: 10.4049/jimmunol.1700332. Epub 2017 Oct 20.

29.

Human evolution: the non-coding revolution.

Franchini LF, Pollard KS.

BMC Biol. 2017 Oct 2;15(1):89. doi: 10.1186/s12915-017-0428-9. Review.

30.

Development of Inflammatory Bowel Disease Is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice.

Sharpton T, Lyalina S, Luong J, Pham J, Deal EM, Armour C, Gaulke C, Sanjabi S, Pollard KS.

mSystems. 2017 Sep 5;2(5). pii: e00036-17. doi: 10.1128/mSystems.00036-17. eCollection 2017 Sep-Oct.

31.

Topical silver diamine fluoride for dental caries arrest in preschool children: A randomized controlled trial and microbiological analysis of caries associated microbes and resistance gene expression.

Milgrom P, Horst JA, Ludwig S, Rothen M, Chaffee BW, Lyalina S, Pollard KS, DeRisi JL, Mancl L.

J Dent. 2018 Jan;68:72-78. doi: 10.1016/j.jdent.2017.08.015. Epub 2017 Sep 1.

32.

Strategies for practitioners to support patients in plant-based eating.

Karlsen MC, Pollard KJ.

J Geriatr Cardiol. 2017 May;14(5):338-341. doi: 10.11909/j.issn.1671-5411.2017.05.006. No abstract available.

33.

From the Cover: Interplay Between IFN-γ and IL-6 Impacts the Inflammatory Response and Expression of Interferon-Regulated Genes in Environmental-Induced Autoimmunity.

Cauvi DM, Cauvi G, Toomey CB, Jacquinet E, Pollard KM.

Toxicol Sci. 2017 Jul 1;158(1):227-239. doi: 10.1093/toxsci/kfx083.

34.

Genomic analyses identify hundreds of variants associated with age at menarche and support a role for puberty timing in cancer risk.

Day FR, Thompson DJ, Helgason H, Chasman DI, Finucane H, Sulem P, Ruth KS, Whalen S, Sarkar AK, Albrecht E, Altmaier E, Amini M, Barbieri CM, Boutin T, Campbell A, Demerath E, Giri A, He C, Hottenga JJ, Karlsson R, Kolcic I, Loh PR, Lunetta KL, Mangino M, Marco B, McMahon G, Medland SE, Nolte IM, Noordam R, Nutile T, Paternoster L, Perjakova N, Porcu E, Rose LM, Schraut KE, Segrè AV, Smith AV, Stolk L, Teumer A, Andrulis IL, Bandinelli S, Beckmann MW, Benitez J, Bergmann S, Bochud M, Boerwinkle E, Bojesen SE, Bolla MK, Brand JS, Brauch H, Brenner H, Broer L, Brüning T, Buring JE, Campbell H, Catamo E, Chanock S, Chenevix-Trench G, Corre T, Couch FJ, Cousminer DL, Cox A, Crisponi L, Czene K, Davey Smith G, de Geus EJCN, de Mutsert R, De Vivo I, Dennis J, Devilee P, Dos-Santos-Silva I, Dunning AM, Eriksson JG, Fasching PA, Fernández-Rhodes L, Ferrucci L, Flesch-Janys D, Franke L, Gabrielson M, Gandin I, Giles GG, Grallert H, Gudbjartsson DF, Guénel P, Hall P, Hallberg E, Hamann U, Harris TB, Hartman CA, Heiss G, Hooning MJ, Hopper JL, Hu F, Hunter DJ, Ikram MA, Im HK, Järvelin MR, Joshi PK, Karasik D, Kellis M, Kutalik Z, LaChance G, Lambrechts D, Langenberg C, Launer LJ, Laven JSE, Lenarduzzi S, Li J, Lind PA, Lindstrom S, Liu Y, Luan J, Mägi R, Mannermaa A, Mbarek H, McCarthy MI, Meisinger C, Meitinger T, Menni C, Metspalu A, Michailidou K, Milani L, Milne RL, Montgomery GW, Mulligan AM, Nalls MA, Navarro P, Nevanlinna H, Nyholt DR, Oldehinkel AJ, O'Mara TA, Padmanabhan S, Palotie A, Pedersen N, Peters A, Peto J, Pharoah PDP, Pouta A, Radice P, Rahman I, Ring SM, Robino A, Rosendaal FR, Rudan I, Rueedi R, Ruggiero D, Sala CF, Schmidt MK, Scott RA, Shah M, Sorice R, Southey MC, Sovio U, Stampfer M, Steri M, Strauch K, Tanaka T, Tikkanen E, Timpson NJ, Traglia M, Truong T, Tyrer JP, Uitterlinden AG, Edwards DRV, Vitart V, Völker U, Vollenweider P, Wang Q, Widen E, van Dijk KW, Willemsen G, Winqvist R, Wolffenbuttel BHR, Zhao JH, Zoledziewska M, Zygmunt M, Alizadeh BZ, Boomsma DI, Ciullo M, Cucca F, Esko T, Franceschini N, Gieger C, Gudnason V, Hayward C, Kraft P, Lawlor DA, Magnusson PKE, Martin NG, Mook-Kanamori DO, Nohr EA, Polasek O, Porteous D, Price AL, Ridker PM, Snieder H, Spector TD, Stöckl D, Toniolo D, Ulivi S, Visser JA, Völzke H, Wareham NJ, Wilson JF; LifeLines Cohort Study; InterAct Consortium; kConFab/AOCS Investigators; Endometrial Cancer Association Consortium; Ovarian Cancer Association Consortium; PRACTICAL consortium, Spurdle AB, Thorsteindottir U, Pollard KS, Easton DF, Tung JY, Chang-Claude J, Hinds D, Murray A, Murabito JM, Stefansson K, Ong KK, Perry JRB.

Nat Genet. 2017 Jun;49(6):834-841. doi: 10.1038/ng.3841. Epub 2017 Apr 24.

35.

Cooperative activation of cardiac transcription through myocardin bridging of paired MEF2 sites.

Anderson CM, Hu J, Thomas R, Gainous TB, Celona B, Sinha T, Dickel DE, Heidt AB, Xu SM, Bruneau BG, Pollard KS, Pennacchio LA, Black BL.

Development. 2017 Apr 1;144(7):1235-1241. doi: 10.1242/dev.138487.

36.

Proteobacteria explain significant functional variability in the human gut microbiome.

Bradley PH, Pollard KS.

Microbiome. 2017 Mar 23;5(1):36. doi: 10.1186/s40168-017-0244-z.

37.

Variation in lung function as a marker of adherence to oral and inhaled medication in cystic fibrosis.

White H, Shaw N, Denman S, Pollard K, Wynne S, Peckham DG.

Eur Respir J. 2017 Mar 8;49(3). pii: 1600987. doi: 10.1183/13993003.00987-2016. Print 2017 Mar.

38.

MicroRNA 181b-3p and its target importin α5 regulate toll-like receptor 4 signaling in Kupffer cells and liver injury in mice in response to ethanol.

Saikia P, Bellos D, McMullen MR, Pollard KA, de la Motte C, Nagy LE.

Hepatology. 2017 Aug;66(2):602-615. doi: 10.1002/hep.29144. Epub 2017 Jul 4.

39.

Morphological differences affect speech transmission over bone conduction.

Pollard KA, Tran PK, Letowski T.

J Acoust Soc Am. 2017 Feb;141(2):936. doi: 10.1121/1.4976001.

PMID:
28253648
40.

Unboxing cluster heatmaps.

Engle S, Whalen S, Joshi A, Pollard KS.

BMC Bioinformatics. 2017 Feb 15;18(Suppl 2):63. doi: 10.1186/s12859-016-1442-6.

41.

The fundamental skills: reducing maternal morbidity and mortality.

Pollard K.

Pract Midwife. 2017 Mar;20(3):23-25.

PMID:
30549971
42.

Myeloid-MyD88 Contributes to Ethanol-Induced Liver Injury in Mice Linking Hepatocellular Death to Inflammation.

Zhou H, Yu M, Roychowdhury S, Sanz-Garcia C, Pollard KA, McMullen MR, Liu X, Li X, Nagy LE.

Alcohol Clin Exp Res. 2017 Apr;41(4):719-726. doi: 10.1111/acer.13345. Epub 2017 Mar 10.

43.

MBRRACE-UK Report launch December 2016.

Pollard K.

Pract Midwife. 2017 Feb;20(2):30-2.

PMID:
30462430
44.

Discovery of Reactive Microbiota-Derived Metabolites that Inhibit Host Proteases.

Guo CJ, Chang FY, Wyche TP, Backus KM, Acker TM, Funabashi M, Taketani M, Donia MS, Nayfach S, Pollard KS, Craik CS, Cravatt BF, Clardy J, Voigt CA, Fischbach MA.

Cell. 2017 Jan 26;168(3):517-526.e18. doi: 10.1016/j.cell.2016.12.021. Epub 2017 Jan 19.

45.

Limited Excessive Voluntary Alcohol Drinking Leads to Liver Dysfunction in Mice.

Wegner SA, Pollard KA, Kharazia V, Darevsky D, Perez L, Roychowdhury S, Xu A, Ron D, Nagy LE, Hopf FW.

Alcohol Clin Exp Res. 2017 Feb;41(2):345-358. doi: 10.1111/acer.13303. Epub 2017 Jan 19.

46.

Modulation of a Circulating Uremic Solute via Rational Genetic Manipulation of the Gut Microbiota.

Devlin AS, Marcobal A, Dodd D, Nayfach S, Plummer N, Meyer T, Pollard KS, Sonnenburg JL, Fischbach MA.

Cell Host Microbe. 2016 Dec 14;20(6):709-715. doi: 10.1016/j.chom.2016.10.021. Epub 2016 Dec 1.

47.

An integrated metagenomics pipeline for strain profiling reveals novel patterns of bacterial transmission and biogeography.

Nayfach S, Rodriguez-Mueller B, Garud N, Pollard KS.

Genome Res. 2016 Nov;26(11):1612-1625. Epub 2016 Oct 18.

48.

A Positive Vestibular/Ocular Motor Screening (VOMS) Is Associated With Increased Recovery Time After Sports-Related Concussion in Youth and Adolescent Athletes.

Anzalone AJ, Blueitt D, Case T, McGuffin T, Pollard K, Garrison JC, Jones MT, Pavur R, Turner S, Oliver JM.

Am J Sports Med. 2017 Feb;45(2):474-479. doi: 10.1177/0363546516668624. Epub 2016 Oct 28.

PMID:
27789472
49.

Translation and psychometric properties of the German version of the University of the West of England Interprofessional Questionnaire (UWE-IP).

Mahler C, Berger S, Pollard K, Krisam J, Karstens S, Szecsenyi J, Krug K.

J Interprof Care. 2017 Jan;31(1):105-109. Epub 2016 Oct 21.

PMID:
27767361
50.

The Relationship Between Humeral Retrotorsion and Shoulder Range of Motion in Baseball Players With an Ulnar Collateral Ligament Tear.

Lee BJ, Garrison JC, Conway JE, Pollard K, Aryal S.

Orthop J Sports Med. 2016 Oct 10;4(10):2325967116667497. eCollection 2016 Oct.

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