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Convergence of three parcellation approaches demonstrating cerebellar lobule volume deficits in Alcohol Use Disorder.

Sullivan EV, Zahr NM, Saranathan M, Pohl KM, Pfefferbaum A.

Neuroimage Clin. 2019 Aug 7;24:101974. doi: 10.1016/j.nicl.2019.101974. [Epub ahead of print]


Image processing and analysis methods for the Adolescent Brain Cognitive Development Study.

Hagler DJ Jr, Hatton S, Cornejo MD, Makowski C, Fair DA, Dick AS, Sutherland MT, Casey BJ, Barch DM, Harms MP, Watts R, Bjork JM, Garavan HP, Hilmer L, Pung CJ, Sicat CS, Kuperman J, Bartsch H, Xue F, Heitzeg MM, Laird AR, Trinh TT, Gonzalez R, Tapert SF, Riedel MC, Squeglia LM, Hyde LW, Rosenberg MD, Earl EA, Howlett KD, Baker FC, Soules M, Diaz J, de Leon OR, Thompson WK, Neale MC, Herting M, Sowell ER, Alvarez RP, Hawes SW, Sanchez M, Bodurka J, Breslin FJ, Morris AS, Paulus MP, Simmons WK, Polimeni JR, van der Kouwe A, Nencka AS, Gray KM, Pierpaoli C, Matochik JA, Noronha A, Aklin WM, Conway K, Glantz M, Hoffman E, Little R, Lopez M, Pariyadath V, Weiss SR, Wolff-Hughes DL, DelCarmen-Wiggins R, Feldstein Ewing SW, Miranda-Dominguez O, Nagel BJ, Perrone AJ, Sturgeon DT, Goldstone A, Pfefferbaum A, Pohl KM, Prouty D, Uban K, Bookheimer SY, Dapretto M, Galvan A, Bagot K, Giedd J, Infante MA, Jacobus J, Patrick K, Shilling PD, Desikan R, Li Y, Sugrue L, Banich MT, Friedman N, Hewitt JK, Hopfer C, Sakai J, Tanabe J, Cottler LB, Nixon SJ, Chang L, Cloak C, Ernst T, Reeves G, Kennedy DN, Heeringa S, Peltier S, Schulenberg J, Sripada C, Zucker RA, Iacono WG, Luciana M, Calabro FJ, Clark DB, Lewis DA, Luna B, Schirda C, Brima T, Foxe JJ, Freedman EG, Mruzek DW, Mason MJ, Huber R, McGlade E, Prescot A, Renshaw PF, Yurgelun-Todd DA, Allgaier NA, Dumas JA, Ivanova M, Potter A, Florsheim P, Larson C, Lisdahl K, Charness ME, Fuemmeler B, Hettema JM, Maes HH, Steinberg J, Anokhin AP, Glaser P, Heath AC, Madden PA, Baskin-Sommers A, Constable RT, Grant SJ, Dowling GJ, Brown SA, Jernigan TL, Dale AM.

Neuroimage. 2019 Aug 12:116091. doi: 10.1016/j.neuroimage.2019.116091. [Epub ahead of print]


Central Nervous System Correlates of "Objective" Neuropathy in Alcohol Use Disorder.

Zahr NM, Pohl KM, Pfefferbaum A, Sullivan EV.

Alcohol Clin Exp Res. 2019 Aug 6. doi: 10.1111/acer.14162. [Epub ahead of print]


Relations between cognitive and motor deficits and regional brain volumes in individuals with alcoholism.

Fama R, Le Berre AP, Sassoon SA, Zahr NM, Pohl KM, Pfefferbaum A, Sullivan EV.

Brain Struct Funct. 2019 Jul;224(6):2087-2101. doi: 10.1007/s00429-019-01894-w. Epub 2019 Jun 3.


Novel Machine Learning Identifies Brain Patterns Distinguishing Diagnostic Membership of Human Immunodeficiency Virus, Alcoholism, and Their Comorbidity of Individuals.

Adeli E, Zahr NM, Pfefferbaum A, Sullivan EV, Pohl KM.

Biol Psychiatry Cogn Neurosci Neuroimaging. 2019 Jun;4(6):589-599. doi: 10.1016/j.bpsc.2019.02.003. Epub 2019 Mar 1.


Accelerated aging and motor control deficits are related to regional deformation of central cerebellar white matter in alcohol use disorder.

Zhao Q, Pfefferbaum A, Podhajsky S, Pohl KM, Sullivan EV.

Addict Biol. 2019 Apr 1. doi: 10.1111/adb.12746. [Epub ahead of print]


Hippocampal subfield CA2+3 exhibits accelerated aging in Alcohol Use Disorder: A preliminary study.

Zahr NM, Pohl KM, Saranathan M, Sullivan EV, Pfefferbaum A.

Neuroimage Clin. 2019;22:101764. doi: 10.1016/j.nicl.2019.101764. Epub 2019 Mar 14.


Longitudinally consistent estimates of intrinsic functional networks.

Zhao Q, Kwon D, Müller-Oehring EM, Le Berre AP, Pfefferbaum A, Sullivan EV, Pohl KM.

Hum Brain Mapp. 2019 Jun 1;40(8):2511-2528. doi: 10.1002/hbm.24541. Epub 2019 Feb 25.


Dissociable Contributions of Precuneus and Cerebellum to Subjective and Objective Neuropathy in HIV.

Zahr NM, Pohl KM, Pfefferbaum A, Sullivan EV.

J Neuroimmune Pharmacol. 2019 Sep;14(3):436-447. doi: 10.1007/s11481-019-09837-2. Epub 2019 Feb 11.


Jacobian Maps Reveal Under-reported Brain Regions Sensitive to Extreme Binge Ethanol Intoxication in the Rat.

Zhao Q, Fritz M, Pfefferbaum A, Sullivan EV, Pohl KM, Zahr NM.

Front Neuroanat. 2018 Dec 11;12:108. doi: 10.3389/fnana.2018.00108. eCollection 2018.


Distribution of brain iron accrual in adolescence: Evidence from cross-sectional and longitudinal analysis.

Peterson ET, Kwon D, Luna B, Larsen B, Prouty D, De Bellis MD, Voyvodic J, Liu C, Li W, Pohl KM, Sullivan EV, Pfefferbaum A.

Hum Brain Mapp. 2019 Apr 1;40(5):1480-1495. doi: 10.1002/hbm.24461. Epub 2018 Nov 29.


Regional growth trajectories of cortical myelination in adolescents and young adults: longitudinal validation and functional correlates.

Kwon D, Pfefferbaum A, Sullivan EV, Pohl KM.

Brain Imaging Behav. 2018 Nov 8. doi: 10.1007/s11682-018-9980-3. [Epub ahead of print]


Chained regularization for identifying brain patterns specific to HIV infection.

Adeli E, Kwon D, Zhao Q, Pfefferbaum A, Zahr NM, Sullivan EV, Pohl KM.

Neuroimage. 2018 Dec;183:425-437. doi: 10.1016/j.neuroimage.2018.08.022. Epub 2018 Aug 21.


Accelerated and Premature Aging Characterizing Regional Cortical Volume Loss in Human Immunodeficiency Virus Infection: Contributions From Alcohol, Substance Use, and Hepatitis C Coinfection.

Pfefferbaum A, Zahr NM, Sassoon SA, Kwon D, Pohl KM, Sullivan EV.

Biol Psychiatry Cogn Neurosci Neuroimaging. 2018 Oct;3(10):844-859. doi: 10.1016/j.bpsc.2018.06.006. Epub 2018 Jul 4.


Alcohol use effects on adolescent brain development revealed by simultaneously removing confounding factors, identifying morphometric patterns, and classifying individuals.

Park SH, Zhang Y, Kwon D, Zhao Q, Zahr NM, Pfefferbaum A, Sullivan EV, Pohl KM.

Sci Rep. 2018 May 29;8(1):8297. doi: 10.1038/s41598-018-26627-7.


The Role of Aging, Drug Dependence, and Hepatitis C Comorbidity in Alcoholism Cortical Compromise.

Sullivan EV, Zahr NM, Sassoon SA, Thompson WK, Kwon D, Pohl KM, Pfefferbaum A.

JAMA Psychiatry. 2018 May 1;75(5):474-483. doi: 10.1001/jamapsychiatry.2018.0021.


Adolescent Executive Dysfunction in Daily Life: Relationships to Risks, Brain Structure and Substance Use.

Clark DB, Chung T, Martin CS, Hasler BP, Fitzgerald DH, Luna B, Brown SA, Tapert SF, Brumback T, Cummins K, Pfefferbaum A, Sullivan EV, Pohl KM, Colrain IM, Baker FC, De Bellis MD, Nooner KB, Nagel BJ.

Front Behav Neurosci. 2017 Nov 13;11:223. doi: 10.3389/fnbeh.2017.00223. eCollection 2017.


Altered Brain Developmental Trajectories in Adolescents After Initiating Drinking.

Pfefferbaum A, Kwon D, Brumback T, Thompson WK, Cummins K, Tapert SF, Brown SA, Colrain IM, Baker FC, Prouty D, De Bellis MD, Clark DB, Nagel BJ, Chu W, Park SH, Pohl KM, Sullivan EV.

Am J Psychiatry. 2018 Apr 1;175(4):370-380. doi: 10.1176/appi.ajp.2017.17040469. Epub 2017 Oct 31.



Niethammer M, Pohl KM, Janoos F, Wells WM 3rd.

SIAM J Imaging Sci. 2017;10(3):1069-1103. doi: 10.1137/16M1058601. Epub 2017 Jul 27.


The mediating role of cortical thickness and gray matter volume on sleep slow-wave activity during adolescence.

Goldstone A, Willoughby AR, de Zambotti M, Franzen PL, Kwon D, Pohl KM, Pfefferbaum A, Sullivan EV, Müller-Oehring EM, Prouty DE, Hasler BP, Clark DB, Colrain IM, Baker FC.

Brain Struct Funct. 2018 Mar;223(2):669-685. doi: 10.1007/s00429-017-1509-9. Epub 2017 Sep 14.


Joint Data Harmonization and Group Cardinality Constrained Classification.

Zhang Y, Park SH, Pohl KM.

Med Image Comput Comput Assist Interv. 2016 Oct;9900:282-290. doi: 10.1007/978-3-319-46720-7_33. Epub 2016 Oct 2.


3D Motion Modeling and Reconstruction of Left Ventricle Wall in Cardiac MRI.

Yang D, Wu P, Tan C, Pohl KM, Axel L, Metaxas D.

Funct Imaging Model Heart. 2017 Jun;10263:481-492. doi: 10.1007/978-3-319-59448-4_46. Epub 2017 May 23.


eCurves: A Temporal Shape Encoding.

Bernardis E, Zhang Y, Konukoglu E, Ou Y, Javitz HS, Axel L, Metaxas D, Desjardins B, Pohl KM.

IEEE Trans Biomed Eng. 2018 Apr;65(4):733-744. doi: 10.1109/TBME.2017.2716365. Epub 2017 Jun 16.


Eveningness and Later Sleep Timing Are Associated with Greater Risk for Alcohol and Marijuana Use in Adolescence: Initial Findings from the National Consortium on Alcohol and Neurodevelopment in Adolescence Study.

Hasler BP, Franzen PL, de Zambotti M, Prouty D, Brown SA, Tapert SF, Pfefferbaum A, Pohl KM, Sullivan EV, De Bellis MD, Nagel BJ, Baker FC, Colrain IM, Clark DB.

Alcohol Clin Exp Res. 2017 Jun;41(6):1154-1165. doi: 10.1111/acer.13401. Epub 2017 May 29.


Effects of prior testing lasting a full year in NCANDA adolescents: Contributions from age, sex, socioeconomic status, ethnicity, site, family history of alcohol or drug abuse, and baseline performance.

Sullivan EV, Brumback T, Tapert SF, Prouty D, Fama R, Thompson WK, Brown SA, Cummins K, Colrain IM, Baker FC, Clark DB, Chung T, De Bellis MD, Hooper SR, Nagel BJ, Nichols BN, Chu W, Kwon D, Pohl KM, Pfefferbaum A.

Dev Cogn Neurosci. 2017 Apr;24:72-83. doi: 10.1016/j.dcn.2017.01.003. Epub 2017 Jan 24.


Influences of Age, Sex, and Moderate Alcohol Drinking on the Intrinsic Functional Architecture of Adolescent Brains.

Müller-Oehring EM, Kwon D, Nagel BJ, Sullivan EV, Chu W, Rohlfing T, Prouty D, Nichols BN, Poline JB, Tapert SF, Brown SA, Cummins K, Brumback T, Colrain IM, Baker FC, De Bellis MD, Voyvodic JT, Clark DB, Pfefferbaum A, Pohl KM.

Cereb Cortex. 2018 Mar 1;28(3):1049-1063. doi: 10.1093/cercor/bhx014.


Structural brain anomalies in healthy adolescents in the NCANDA cohort: relation to neuropsychological test performance, sex, and ethnicity.

Sullivan EV, Lane B, Kwon D, Meloy MJ, Tapert SF, Brown SA, Colrain IM, Baker FC, De Bellis MD, Clark DB, Nagel BJ, Pohl KM, Pfefferbaum A.

Brain Imaging Behav. 2017 Oct;11(5):1302-1315. doi: 10.1007/s11682-016-9634-2.


Solving Logistic Regression with Group Cardinality Constraints for Time Series Analysis.

Zhang Y, Pohl KM.

Med Image Comput Comput Assist Interv. 2015 Oct;9351:459-466. Epub 2015 Nov 18.


Extracting patterns of morphometry distinguishing HIV associated neurodegeneration from mild cognitive impairment via group cardinality constrained classification.

Zhang Y, Kwon D, Esmaeili-Firidouni P, Pfefferbaum A, Sullivan EV, Javitz H, Valcour V, Pohl KM.

Hum Brain Mapp. 2016 Dec;37(12):4523-4538. doi: 10.1002/hbm.23326. Epub 2016 Aug 4.


Computing group cardinality constraint solutions for logistic regression problems.

Zhang Y, Kwon D, Pohl KM.

Med Image Anal. 2017 Jan;35:58-69. doi: 10.1016/ Epub 2016 Jun 11.


Harmonizing DTI measurements across scanners to examine the development of white matter microstructure in 803 adolescents of the NCANDA study.

Pohl KM, Sullivan EV, Rohlfing T, Chu W, Kwon D, Nichols BN, Zhang Y, Brown SA, Tapert SF, Cummins K, Thompson WK, Brumback T, Colrain IM, Baker FC, Prouty D, De Bellis MD, Voyvodic JT, Clark DB, Schirda C, Nagel BJ, Pfefferbaum A.

Neuroimage. 2016 Apr 15;130:194-213. doi: 10.1016/j.neuroimage.2016.01.061. Epub 2016 Feb 10.


Cognitive, emotion control, and motor performance of adolescents in the NCANDA study: Contributions from alcohol consumption, age, sex, ethnicity, and family history of addiction.

Sullivan EV, Brumback T, Tapert SF, Fama R, Prouty D, Brown SA, Cummins K, Thompson WK, Colrain IM, Baker FC, De Bellis MD, Hooper SR, Clark DB, Chung T, Nagel BJ, Nichols BN, Rohlfing T, Chu W, Pohl KM, Pfefferbaum A.

Neuropsychology. 2016 May;30(4):449-73. doi: 10.1037/neu0000259. Epub 2016 Jan 11. Erratum in: Neuropsychology. 2016 Oct;30(7):829.


The National Consortium on Alcohol and NeuroDevelopment in Adolescence (NCANDA): A Multisite Study of Adolescent Development and Substance Use.

Brown SA, Brumback T, Tomlinson K, Cummins K, Thompson WK, Nagel BJ, De Bellis MD, Hooper SR, Clark DB, Chung T, Hasler BP, Colrain IM, Baker FC, Prouty D, Pfefferbaum A, Sullivan EV, Pohl KM, Rohlfing T, Nichols BN, Chu W, Tapert SF.

J Stud Alcohol Drugs. 2015 Nov;76(6):895-908.


Adolescent Development of Cortical and White Matter Structure in the NCANDA Sample: Role of Sex, Ethnicity, Puberty, and Alcohol Drinking.

Pfefferbaum A, Rohlfing T, Pohl KM, Lane B, Chu W, Kwon D, Nolan Nichols B, Brown SA, Tapert SF, Cummins K, Thompson WK, Brumback T, Meloy MJ, Jernigan TL, Dale A, Colrain IM, Baker FC, Prouty D, De Bellis MD, Voyvodic JT, Clark DB, Luna B, Chung T, Nagel BJ, Sullivan EV.

Cereb Cortex. 2016 Oct;26(10):4101-21. doi: 10.1093/cercor/bhv205. Epub 2015 Sep 26.


White matter microstructural recovery with abstinence and decline with relapse in alcohol dependence interacts with normal ageing: a controlled longitudinal DTI study.

Pfefferbaum A, Rosenbloom MJ, Chu W, Sassoon SA, Rohlfing T, Pohl KM, Zahr NM, Sullivan EV.

Lancet Psychiatry. 2014 Aug;1(3):202-12. doi: 10.1016/S2215-0366(14)70301-3. Epub 2014 Aug 5.


Neuroinformatics Software Applications Supporting Electronic Data Capture, Management, and Sharing for the Neuroimaging Community.

Nichols BN, Pohl KM.

Neuropsychol Rev. 2015 Sep;25(3):356-68. doi: 10.1007/s11065-015-9293-x. Epub 2015 Aug 13. Review.


Regional manifold learning for disease classification.

Ye DH, Desjardins B, Hamm J, Litt H, Pohl KM.

IEEE Trans Med Imaging. 2014 Jun;33(6):1236-47. doi: 10.1109/TMI.2014.2305751.



Ye DH, Desjardins B, Ferrari V, Metaxas D, Pohl KM.

Proc IEEE Int Symp Biomed Imaging. 2014 Apr-May;2014:217-221. doi: 10.1109/ISBI.2014.6867848. Epub 2014 Jul 31.


PORTR: Pre-operative and post-recurrence brain tumor registration.

Kwon D, Niethammer M, Akbari H, Bilello M, Davatzikos C, Pohl KM.

IEEE Trans Med Imaging. 2014 Mar;33(3):651-67. doi: 10.1109/TMI.2013.2293478.


FLOOR: fusing locally optimal registrations.

Ye DH, Hamm J, Desjardins B, Pohl KM.

Med Image Comput Comput Assist Interv. 2013;16(Pt 3):195-202.


WESD--Weighted Spectral Distance for measuring shape dissimilarity.

Konukoglu E, Glocker B, Criminisi A, Pohl KM.

IEEE Trans Pattern Anal Mach Intell. 2013 Sep;35(9):2284-97. doi: 10.1109/TPAMI.2012.275.


Regional manifold learning for deformable registration of brain MR images.

Ye DH, Hamm J, Kwon D, Davatzikos C, Pohl KM.

Med Image Comput Comput Assist Interv. 2012;15(Pt 3):131-8.


Temporal shape analysis via the spectral signature.

Bernardis E, Konukoglu E, Ou Y, Metaxas DN, Desjardins B, Pohl KM.

Med Image Comput Comput Assist Interv. 2012;15(Pt 2):49-56.


Multinomial probabilistic fiber representation for connectivity driven clustering.

Tunç B, Smith AR, Wasserman D, Pennec X, Wells WM, Verma R, Pohl KM.

Inf Process Med Imaging. 2013;23:730-41.


Extracting evolving pathologies via spectral clustering.

Bernardis E, Pohl KM, Davatzikos C.

Inf Process Med Imaging. 2013;23:680-91.


Preface. Information processing in medical imaging.

Wells WM, Joshi S, Pohl KM.

Inf Process Med Imaging. 2013;23:V-VII. No abstract available.


Discriminative segmentation-based evaluation through shape dissimilarity.

Konukoglu E, Glocker B, Ye DH, Criminisi A, Pohl KM.

IEEE Trans Med Imaging. 2012 Dec;31(12):2278-89. doi: 10.1109/TMI.2012.2216281. Epub 2012 Aug 30.


GLISTR: glioma image segmentation and registration.

Gooya A, Pohl KM, Bilello M, Cirillo L, Biros G, Melhem ER, Davatzikos C.

IEEE Trans Med Imaging. 2012 Oct;31(10):1941-54. doi: 10.1109/TMI.2012.2210558. Epub 2012 Aug 13.


Validation of DRAMMS among 12 Popular Methods in Cross-Subject Cardiac MRI Registration.

Ou Y, Ye DH, Pohl KM, Davatzikos C.

Biomed Image Regist Proc. 2012 Jul;7359:209-219. doi: 10.1007/978-3-642-31340-0_22.



Kwon D, Yun ID, Pohl KM, Davatzikos C, Lee SU.

Proc IEEE Int Symp Biomed Imaging. 2012 May;2012:708-711. doi: 10.1109/ISBI.2012.6235646. Epub 2012 Jul 12.

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