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Items: 44

1.

Improved Reversed Phase Chromatography of Hydrophilic Peptides from Spatial and Temporal Changes in Column Temperature.

Young C, Podtelejnikov AV, Nielsen ML.

J Proteome Res. 2017 Jun 2;16(6):2307-2317. doi: 10.1021/acs.jproteome.6b01055. Epub 2017 Apr 7.

PMID:
28387123
2.

Performance of combinatorial peptide libraries in capturing the low-abundance proteome of red blood cells. 1. Behavior of mono- to hexapeptides.

Simó C, Bachi A, Cattaneo A, Guerrier L, Fortis F, Boschetti E, Podtelejnikov A, Righetti PG.

Anal Chem. 2008 May 15;80(10):3547-56. doi: 10.1021/ac702635v. Epub 2008 Apr 10.

PMID:
18399644
3.

Integrated analysis of the cerebrospinal fluid peptidome and proteome.

Zougman A, Pilch B, Podtelejnikov A, Kiehntopf M, Schnabel C, Kumar C, Mann M.

J Proteome Res. 2008 Jan;7(1):386-99. Epub 2007 Dec 4.

PMID:
18052119
4.

Analysis of the mouse liver proteome using advanced mass spectrometry.

Shi R, Kumar C, Zougman A, Zhang Y, Podtelejnikov A, Cox J, Wiśniewski JR, Mann M.

J Proteome Res. 2007 Aug;6(8):2963-72. Epub 2007 Jul 3.

PMID:
17608399
5.

Yeast poly(A)-binding protein Pab1 shuttles between the nucleus and the cytoplasm and functions in mRNA export.

Brune C, Munchel SE, Fischer N, Podtelejnikov AV, Weis K.

RNA. 2005 Apr;11(4):517-31.

6.

Proteomic mapping of brain plasma membrane proteins.

Nielsen PA, Olsen JV, Podtelejnikov AV, Andersen JR, Mann M, Wisniewski JR.

Mol Cell Proteomics. 2005 Apr;4(4):402-8. Epub 2005 Jan 30.

7.

Experimental Peptide Identification Repository (EPIR): an integrated peptide-centric platform for validation and mining of tandem mass spectrometry data.

Kristensen DB, Brønd JC, Nielsen PA, Andersen JR, Sørensen OT, Jørgensen V, Budin K, Matthiesen J, Venø P, Jespersen HM, Ahrens CH, Schandorff S, Ruhoff PT, Wisniewski JR, Bennett KL, Podtelejnikov AV.

Mol Cell Proteomics. 2004 Oct;3(10):1023-38. Epub 2004 Jul 29.

8.

Screening for N-glycosylated proteins by liquid chromatography mass spectrometry.

Bunkenborg J, Pilch BJ, Podtelejnikov AV, Wiśniewski JR.

Proteomics. 2004 Feb;4(2):454-65.

PMID:
14760718
9.

Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs.

Mitchell P, Petfalski E, Houalla R, Podtelejnikov A, Mann M, Tollervey D.

Mol Cell Biol. 2003 Oct;23(19):6982-92.

10.

Cloning of a novel phosphotyrosine binding domain containing molecule, Odin, involved in signaling by receptor tyrosine kinases.

Pandey A, Blagoev B, Kratchmarova I, Fernandez M, Nielsen M, Kristiansen TZ, Ohara O, Podtelejnikov AV, Roche S, Lodish HF, Mann M.

Oncogene. 2002 Nov 14;21(52):8029-36.

11.

Regulation of G(2)/M events by Cdc25A through phosphorylation-dependent modulation of its stability.

Mailand N, Podtelejnikov AV, Groth A, Mann M, Bartek J, Lukas J.

EMBO J. 2002 Nov 1;21(21):5911-20.

12.

Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development.

Chen L, Segal D, Hukriede NA, Podtelejnikov AV, Bayarsaihan D, Kennison JA, Ogryzko VV, Dawid IB, Westphal H.

Proc Natl Acad Sci U S A. 2002 Oct 29;99(22):14320-5. Epub 2002 Oct 15.

13.

Mechanism of regulation of WAVE1-induced actin nucleation by Rac1 and Nck.

Eden S, Rohatgi R, Podtelejnikov AV, Mann M, Kirschner MW.

Nature. 2002 Aug 15;418(6899):790-3.

PMID:
12181570
14.

A proteomic approach for identification of secreted proteins during the differentiation of 3T3-L1 preadipocytes to adipocytes.

Kratchmarova I, Kalume DE, Blagoev B, Scherer PE, Podtelejnikov AV, Molina H, Bickel PE, Andersen JS, Fernandez MM, Bunkenborg J, Roepstorff P, Kristiansen K, Lodish HF, Mann M, Pandey A.

Mol Cell Proteomics. 2002 Mar;1(3):213-22.

15.

Identification of yeast proteins by mass spectrometry.

Podtelejnikov AV, Mann M.

Methods Enzymol. 2002;351:296-321. No abstract available.

PMID:
12073351
16.

Multi-Protein Complexes Studied by Mass Spectrometry.

Andersen JS, Rappsilber J, Steen H, Pandey A, Molina H, Lund M, Podtelejnikov A, Lamond AI, Mann M.

ScientificWorldJournal. 2002 Apr 19;2:91-92. doi: 10.1100/tsw.2002.43. eCollection 2002. No abstract available.

17.

Phosphopeptide detection and sequencing by matrix-assisted laser desorption/ionization quadrupole time-of-flight tandem mass spectrometry.

Bennett KL, Stensballe A, Podtelejnikov AV, Moniatte M, Jensen ON.

J Mass Spectrom. 2002 Feb;37(2):179-90.

PMID:
11857762
18.

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry.

Ho Y, Gruhler A, Heilbut A, Bader GD, Moore L, Adams SL, Millar A, Taylor P, Bennett K, Boutilier K, Yang L, Wolting C, Donaldson I, Schandorff S, Shewnarane J, Vo M, Taggart J, Goudreault M, Muskat B, Alfarano C, Dewar D, Lin Z, Michalickova K, Willems AR, Sassi H, Nielsen PA, Rasmussen KJ, Andersen JR, Johansen LE, Hansen LH, Jespersen H, Podtelejnikov A, Nielsen E, Crawford J, Poulsen V, Sørensen BD, Matthiesen J, Hendrickson RC, Gleeson F, Pawson T, Moran MF, Durocher D, Mann M, Hogue CW, Figeys D, Tyers M.

Nature. 2002 Jan 10;415(6868):180-3.

PMID:
11805837
19.

Maturation and intranuclear transport of pre-ribosomes requires Noc proteins.

Milkereit P, Gadal O, Podtelejnikov A, Trumtel S, Gas N, Petfalski E, Tollervey D, Mann M, Hurt E, Tschochner H.

Cell. 2001 May 18;105(4):499-509.

20.

The nuclear export receptor Xpo1p forms distinct complexes with NES transport substrates and the yeast Ran binding protein 1 (Yrb1p).

Maurer P, Redd M, Solsbacher J, Bischoff FR, Greiner M, Podtelejnikov AV, Mann M, Stade K, Weis K, Schlenstedt G.

Mol Biol Cell. 2001 Mar;12(3):539-49.

21.

The RING-H2 finger protein APC11 and the E2 enzyme UBC4 are sufficient to ubiquitinate substrates of the anaphase-promoting complex.

Gmachl M, Gieffers C, Podtelejnikov AV, Mann M, Peters JM.

Proc Natl Acad Sci U S A. 2000 Aug 1;97(16):8973-8.

22.

Nup116p associates with the Nup82p-Nsp1p-Nup159p nucleoporin complex.

Bailer SM, Balduf C, Katahira J, Podtelejnikov A, Rollenhagen C, Mann M, Pante N, Hurt E.

J Biol Chem. 2000 Aug 4;275(31):23540-8.

23.

Mitotic regulation of the APC activator proteins CDC20 and CDH1.

Kramer ER, Scheuringer N, Podtelejnikov AV, Mann M, Peters JM.

Mol Biol Cell. 2000 May;11(5):1555-69.

24.

Association of yeast RNA polymerase I with a nucleolar substructure active in rRNA synthesis and processing.

Fath S, Milkereit P, Podtelejnikov AV, Bischler N, Schultz P, Bier M, Mann M, Tschochner H.

J Cell Biol. 2000 May 1;149(3):575-90.

25.

Proteins complexed to the P1 adhesin of Mycoplasma pneumoniae.

Layh-Schmitt G, Podtelejnikov A, Mann M.

Microbiology. 2000 Mar;146 ( Pt 3):741-7.

PMID:
10746778
26.

Analysis of receptor signaling pathways by mass spectrometry: identification of vav-2 as a substrate of the epidermal and platelet-derived growth factor receptors.

Pandey A, Podtelejnikov AV, Blagoev B, Bustelo XR, Mann M, Lodish HF.

Proc Natl Acad Sci U S A. 2000 Jan 4;97(1):179-84.

27.

Purification of protein A-tagged yeast ran reveals association with a novel karyopherin beta family member, Pdr6p.

Lau D, Künzler M, Braunwarth A, Hellmuth K, Podtelejnikov A, Mann M, Hurt E.

J Biol Chem. 2000 Jan 7;275(1):467-71.

28.

Mlp2p, a component of nuclear pore attached intranuclear filaments, associates with nic96p.

Kosova B, Panté N, Rollenhagen C, Podtelejnikov A, Mann M, Aebi U, Hurt E.

J Biol Chem. 2000 Jan 7;275(1):343-50.

29.

Endophilin I mediates synaptic vesicle formation by transfer of arachidonate to lysophosphatidic acid.

Schmidt A, Wolde M, Thiele C, Fest W, Kratzin H, Podtelejnikov AV, Witke W, Huttner WB, Söling HD.

Nature. 1999 Sep 9;401(6749):133-41.

PMID:
10490020
30.

The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases.

Allmang C, Petfalski E, Podtelejnikov A, Mann M, Tollervey D, Mitchell P.

Genes Dev. 1999 Aug 15;13(16):2148-58.

31.

Control of the terminal step of intracellular membrane fusion by protein phosphatase 1.

Peters C, Andrews PD, Stark MJ, Cesaro-Tadic S, Glatz A, Podtelejnikov A, Mann M, Mayer A.

Science. 1999 Aug 13;285(5430):1084-7.

32.

Characterization of the DOC1/APC10 subunit of the yeast and the human anaphase-promoting complex.

Grossberger R, Gieffers C, Zachariae W, Podtelejnikov AV, Schleiffer A, Nasmyth K, Mann M, Peters JM.

J Biol Chem. 1999 May 14;274(20):14500-7.

33.

The Mex67p-mediated nuclear mRNA export pathway is conserved from yeast to human.

Katahira J, Strässer K, Podtelejnikov A, Mann M, Jung JU, Hurt E.

EMBO J. 1999 May 4;18(9):2593-609.

34.

Use of mass spectrometric methods for protein identification in receptor research.

Schrotz-King P, Wilm M, Andersen JS, Ashman K, Podtelejnikov AV, Bachi A, King A, Mann M.

J Recept Signal Transduct Res. 1999 Jan-Jul;19(1-4):659-72.

PMID:
10071791
35.

Identification of MINUS, a small polypeptide that functions as a microtubule nucleation suppressor.

Fanara P, Oback B, Ashman K, Podtelejnikov A, Brandt R.

EMBO J. 1999 Feb 1;18(3):565-77.

36.

Correlation of acidic and basic carrier ampholyte and immobilized pH gradient two-dimensional gel electrophoresis patterns based on mass spectrometric protein identification.

Nawrocki A, Larsen MR, Podtelejnikov AV, Jensen ON, Mann M, Roepstorff P, Görg A, Fey SJ, Larsen PM.

Electrophoresis. 1998 May;19(6):1024-35.

PMID:
9638949
37.

Mtr10p functions as a nuclear import receptor for the mRNA-binding protein Npl3p.

Senger B, Simos G, Bischoff FR, Podtelejnikov A, Mann M, Hurt E.

EMBO J. 1998 Apr 15;17(8):2196-207.

38.

Nup116p and nup100p are interchangeable through a conserved motif which constitutes a docking site for the mRNA transport factor gle2p.

Bailer SM, Siniossoglou S, Podtelejnikov A, Hellwig A, Mann M, Hurt E.

EMBO J. 1998 Feb 16;17(4):1107-19.

39.

In mouse brain profilin I and profilin II associate with regulators of the endocytic pathway and actin assembly.

Witke W, Podtelejnikov AV, Di Nardo A, Sutherland JD, Gurniak CB, Dotti C, Mann M.

EMBO J. 1998 Feb 16;17(4):967-76.

40.
41.

The complex containing actin-related proteins Arp2 and Arp3 is required for the motility and integrity of yeast actin patches.

Winter D, Podtelejnikov AV, Mann M, Li R.

Curr Biol. 1997 Jul 1;7(7):519-29. Erratum in: Curr Biol 1997 Sep 1;7(9):R593.

42.

Linking genome and proteome by mass spectrometry: large-scale identification of yeast proteins from two dimensional gels.

Shevchenko A, Jensen ON, Podtelejnikov AV, Sagliocco F, Wilm M, Vorm O, Mortensen P, Shevchenko A, Boucherie H, Mann M.

Proc Natl Acad Sci U S A. 1996 Dec 10;93(25):14440-5.

43.

A strategy for identifying gel-separated proteins in sequence databases by MS alone.

Shevchenko A, Wilm M, Vorm O, Jensen ON, Podtelejnikov AV, Neubauer G, Shevchenko A, Mortensen P, Mann M.

Biochem Soc Trans. 1996 Aug;24(3):893-6. No abstract available.

PMID:
8878870
44.

Delayed extraction improves specificity in database searches by matrix-assisted laser desorption/ionization peptide maps.

Jensen ON, Podtelejnikov A, Mann M.

Rapid Commun Mass Spectrom. 1996;10(11):1371-8.

PMID:
8805846

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