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Items: 47


Comparative Genomics of Cyanobacterial Symbionts Reveals Distinct, Specialized Metabolism in Tropical Dysideidae Sponges.

Schorn MA, Jordan PA, Podell S, Blanton JM, Agarwal V, Biggs JS, Allen EE, Moore BS.

MBio. 2019 May 14;10(3). pii: e00821-19. doi: 10.1128/mBio.00821-19.


Pangenomic comparison of globally distributed Poribacteria associated with sponge hosts and marine particles.

Podell S, Blanton JM, Neu A, Agarwal V, Biggs JS, Moore BS, Allen EE.

ISME J. 2019 Feb;13(2):468-481. doi: 10.1038/s41396-018-0292-9. Epub 2018 Oct 5.


Distinctive Archaeal Composition of an Artisanal Crystallizer Pond and Functional Insights Into Salt-Saturated Hypersaline Environment Adaptation.

Plominsky AM, Henríquez-Castillo C, Delherbe N, Podell S, Ramirez-Flandes S, Ugalde JA, Santibañez JF, van den Engh G, Hanselmann K, Ulloa O, De la Iglesia R, Allen EE, Trefault N.

Front Microbiol. 2018 Aug 14;9:1800. doi: 10.3389/fmicb.2018.01800. eCollection 2018.


Metabolic potential and in situ transcriptomic profiles of previously uncharacterized key microbial groups involved in coupled carbon, nitrogen and sulfur cycling in anoxic marine zones.

Plominsky AM, Trefault N, Podell S, Blanton JM, De la Iglesia R, Allen EE, von Dassow P, Ulloa O.

Environ Microbiol. 2018 Aug;20(8):2727-2742. doi: 10.1111/1462-2920.14109. Epub 2018 Apr 16.


The metabolic potential of the single cell genomes obtained from the Challenger Deep, Mariana Trench within the candidate superphylum Parcubacteria (OD1).

León-Zayas R, Peoples L, Biddle JF, Podell S, Novotny M, Cameron J, Lasken RS, Bartlett DH.

Environ Microbiol. 2017 Jul;19(7):2769-2784. doi: 10.1111/1462-2920.13789. Epub 2017 Jun 22.


Metagenomic discovery of polybrominated diphenyl ether biosynthesis by marine sponges.

Agarwal V, Blanton JM, Podell S, Taton A, Schorn MA, Busch J, Lin Z, Schmidt EW, Jensen PR, Paul VJ, Biggs JS, Golden JW, Allen EE, Moore BS.

Nat Chem Biol. 2017 May;13(5):537-543. doi: 10.1038/nchembio.2330. Epub 2017 Mar 20.


Comparative genomics uncovers the prolific and distinctive metabolic potential of the cyanobacterial genus Moorea.

Leao T, Castelão G, Korobeynikov A, Monroe EA, Podell S, Glukhov E, Allen EE, Gerwick WH, Gerwick L.

Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):3198-3203. doi: 10.1073/pnas.1618556114. Epub 2017 Mar 6.


Re-Examining Safety Protocols for Tylenol.

Podell SW, Rubin MM, Sadoff R, Lee Y.

J N J Dent Assoc. 2017 Mar;88(1):16-18. Review.


Genome and methylome of the oleaginous diatom Cyclotella cryptica reveal genetic flexibility toward a high lipid phenotype.

Traller JC, Cokus SJ, Lopez DA, Gaidarenko O, Smith SR, McCrow JP, Gallaher SD, Podell S, Thompson M, Cook O, Morselli M, Jaroszewicz A, Allen EE, Allen AE, Merchant SS, Pellegrini M, Hildebrand M.

Biotechnol Biofuels. 2016 Nov 25;9:258. eCollection 2016.


Sequencing rare marine actinomycete genomes reveals high density of unique natural product biosynthetic gene clusters.

Schorn MA, Alanjary MM, Aguinaldo K, Korobeynikov A, Podell S, Patin N, Lincecum T, Jensen PR, Ziemert N, Moore BS.

Microbiology. 2016 Dec;162(12):2075-2086. doi: 10.1099/mic.0.000386. Epub 2016 Oct 27.


Single cells within the Puerto Rico trench suggest hadal adaptation of microbial lineages.

León-Zayas R, Novotny M, Podell S, Shepard CM, Berkenpas E, Nikolenko S, Pevzner P, Lasken RS, Bartlett DH.

Appl Environ Microbiol. 2015 Dec;81(24):8265-76. doi: 10.1128/AEM.01659-15. Epub 2015 Sep 18.


Genome of Methanoregula boonei 6A8 reveals adaptations to oligotrophic peatland environments.

Bräuer S, Cadillo-Quiroz H, Kyrpides N, Woyke T, Goodwin L, Detter C, Podell S, Yavitt JB, Zinder SH.

Microbiology. 2015 Aug;161(8):1572-81. doi: 10.1099/mic.0.000117. Epub 2015 May 21.


Filling in the gap.

Podell SW, Maloney WJ, Emerick CR.

J Mass Dent Soc. 2013 Spring;62(1):48. No abstract available.


Characterization of cyanobacterial hydrocarbon composition and distribution of biosynthetic pathways.

Coates RC, Podell S, Korobeynikov A, Lapidus A, Pevzner P, Sherman DH, Allen EE, Gerwick L, Gerwick WH.

PLoS One. 2014 Jan 27;9(1):e85140. doi: 10.1371/journal.pone.0085140. eCollection 2014.


Draft Genome Sequence of "Candidatus Halobonum tyrrellensis" Strain G22, Isolated from the Hypersaline Waters of Lake Tyrrell, Australia.

Ugalde JA, Narasingarao P, Kuo S, Podell S, Allen EE.

Genome Announc. 2013 Dec 12;1(6). pii: e01001-13. doi: 10.1128/genomeA.01001-13.


Seasonal fluctuations in ionic concentrations drive microbial succession in a hypersaline lake community.

Podell S, Emerson JB, Jones CM, Ugalde JA, Welch S, Heidelberg KB, Banfield JF, Allen EE.

ISME J. 2014 May;8(5):979-90. doi: 10.1038/ismej.2013.221. Epub 2013 Dec 12.


Assembly-driven community genomics of a hypersaline microbial ecosystem.

Podell S, Ugalde JA, Narasingarao P, Banfield JF, Heidelberg KB, Allen EE.

PLoS One. 2013 Apr 18;8(4):e61692. doi: 10.1371/journal.pone.0061692. Print 2013.


The natural product domain seeker NaPDoS: a phylogeny based bioinformatic tool to classify secondary metabolite gene diversity.

Ziemert N, Podell S, Penn K, Badger JH, Allen E, Jensen PR.

PLoS One. 2012;7(3):e34064. doi: 10.1371/journal.pone.0034064. Epub 2012 Mar 29.


Genomic and functional analysis of Vibrio phage SIO-2 reveals novel insights into ecology and evolution of marine siphoviruses.

Baudoux AC, Hendrix RW, Lander GC, Bailly X, Podell S, Paillard C, Johnson JE, Potter CS, Carragher B, Azam F.

Environ Microbiol. 2012 Aug;14(8):2071-86. doi: 10.1111/j.1462-2920.2011.02685.x. Epub 2012 Jan 9.


Xenorhodopsins, an enigmatic new class of microbial rhodopsins horizontally transferred between archaea and bacteria.

Ugalde JA, Podell S, Narasingarao P, Allen EE.

Biol Direct. 2011 Oct 10;6:52. doi: 10.1186/1745-6150-6-52.


De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities.

Narasingarao P, Podell S, Ugalde JA, Brochier-Armanet C, Emerson JB, Brocks JJ, Heidelberg KB, Banfield JF, Allen EE.

ISME J. 2012 Jan;6(1):81-93. doi: 10.1038/ismej.2011.78. Epub 2011 Jun 30.


Genomic insights into the physiology and ecology of the marine filamentous cyanobacterium Lyngbya majuscula.

Jones AC, Monroe EA, Podell S, Hess WR, Klages S, Esquenazi E, Niessen S, Hoover H, Rothmann M, Lasken RS, Yates JR 3rd, Reinhardt R, Kube M, Burkart MD, Allen EE, Dorrestein PC, Gerwick WH, Gerwick L.

Proc Natl Acad Sci U S A. 2011 May 24;108(21):8815-20. doi: 10.1073/pnas.1101137108. Epub 2011 May 9.


The genome of the Gram-positive metal- and sulfate-reducing bacterium Desulfotomaculum reducens strain MI-1.

Junier P, Junier T, Podell S, Sims DR, Detter JC, Lykidis A, Han CS, Wigginton NS, Gaasterland T, Bernier-Latmani R.

Environ Microbiol. 2010 Oct;12(10):2738-54. doi: 10.1111/j.1462-2920.2010.02242.x.


Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria.

Penn K, Jenkins C, Nett M, Udwary DW, Gontang EA, McGlinchey RP, Foster B, Lapidus A, Podell S, Allen EE, Moore BS, Jensen PR.

ISME J. 2009 Oct;3(10):1193-203. doi: 10.1038/ismej.2009.58. Epub 2009 May 28.


A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm.

Podell S, Gaasterland T, Allen EE.

BMC Bioinformatics. 2008 Oct 7;9:419. doi: 10.1186/1471-2105-9-419.


Genomic insights into Mn(II) oxidation by the marine alphaproteobacterium Aurantimonas sp. strain SI85-9A1.

Dick GJ, Podell S, Johnson HA, Rivera-Espinoza Y, Bernier-Latmani R, McCarthy JK, Torpey JW, Clement BG, Gaasterland T, Tebo BM.

Appl Environ Microbiol. 2008 May;74(9):2646-58. doi: 10.1128/AEM.01656-07. Epub 2008 Mar 14.


Metabolic versatility of the Riftia pachyptila endosymbiont revealed through metagenomics.

Robidart JC, Bench SR, Feldman RA, Novoradovsky A, Podell SB, Gaasterland T, Allen EE, Felbeck H.

Environ Microbiol. 2008 Mar;10(3):727-37. doi: 10.1111/j.1462-2920.2007.01496.x.


The phagosomal nutrient transporter (Pht) family.

Chen DE, Podell S, Sauer JD, Swanson MS, Saier MH Jr.

Microbiology. 2008 Jan;154(Pt 1):42-53. doi: 10.1099/mic.0.2007/010611-0.


The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation.

Palenik B, Grimwood J, Aerts A, Rouzé P, Salamov A, Putnam N, Dupont C, Jorgensen R, Derelle E, Rombauts S, Zhou K, Otillar R, Merchant SS, Podell S, Gaasterland T, Napoli C, Gendler K, Manuell A, Tai V, Vallon O, Piganeau G, Jancek S, Heijde M, Jabbari K, Bowler C, Lohr M, Robbens S, Werner G, Dubchak I, Pazour GJ, Ren Q, Paulsen I, Delwiche C, Schmutz J, Rokhsar D, Van de Peer Y, Moreau H, Grigoriev IV.

Proc Natl Acad Sci U S A. 2007 May 1;104(18):7705-10. Epub 2007 Apr 25.


Genomic resources for songbird research and their use in characterizing gene expression during brain development.

Li X, Wang XJ, Tannenhauser J, Podell S, Mukherjee P, Hertel M, Biane J, Masuda S, Nottebohm F, Gaasterland T.

Proc Natl Acad Sci U S A. 2007 Apr 17;104(16):6834-9. Epub 2007 Apr 10.


Extra domains in secondary transport carriers and channel proteins.

Barabote RD, Tamang DG, Abeywardena SN, Fallah NS, Fu JY, Lio JK, Mirhosseini P, Pezeshk R, Podell S, Salampessy ML, Thever MD, Saier MH Jr.

Biochim Biophys Acta. 2006 Oct;1758(10):1557-79. Epub 2006 Jun 27. Review.


Predicting N-terminal myristoylation sites in plant proteins.

Podell S, Gribskov M.

BMC Genomics. 2004 Jun 17;5(1):37.


In vitro, animal, and human characterization of OPTISON infusions for myocardial contrast echocardiography.

Miller JJ, Tiemann K, Podell S, Doerr Stevens JK, Kuvelas T, Greener Y, Killam AL, Goenechea J, Dittrich HC, Becher H.

J Am Soc Echocardiogr. 1999 Dec;12(12):1027-34.


Physical and biochemical stability of Optison, an injectable ultrasound contrast agent.

Podell S, Burrascano C, Gaal M, Golec B, Maniquis J, Mehlhaff P.

Biotechnol Appl Biochem. 1999 Dec;30 ( Pt 3):213-23.


Periapical cemental dysplasia: a case report.

Podell SW.

J N J Dent Assoc. 1993 Winter;64(1):15, 17-8. No abstract available.


Intermittent tube feedings and gastroesophageal reflux control in head-injured patients.

Podell SK.

J Am Diet Assoc. 1989 Jan;89(1):102-3. No abstract available.


The sequence of chicken c-yes and p61c-yes.

Zheng XF, Podell S, Sefton BM, Kaplan PL.

Oncogene. 1989 Jan;4(1):99-104.


Interpretation of heterophoria and duction findings when using the Humphrey Vision Analyzer.

Werner DL, Podell S.

Am J Optom Physiol Opt. 1982 Nov;59(11):878-84. No abstract available.


Effectiveness of hypertension screening in an urban optometric clinic.

Werner DL, Podell S.

J Am Optom Assoc. 1978 Dec;49(12):1393-1403.


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