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Items: 1 to 50 of 104

1.

In silico pharmacophore modeling and simulation studies for searching potent antileishmanials targeted against Leishmania donovani nicotinamidase.

Chauhan N, Poddar R.

Comput Biol Chem. 2019 Dec;83:107150. doi: 10.1016/j.compbiolchem.2019.107150. Epub 2019 Oct 31.

PMID:
31733620
2.

Engineering of Gadolinium-Decorated Graphene Oxide Nanosheets for Multimodal Bioimaging and Drug Delivery.

Chawda N, Basu M, Majumdar D, Poddar R, Mahapatra SK, Banerjee I.

ACS Omega. 2019 Jul 22;4(7):12470-12479. doi: 10.1021/acsomega.9b00883. eCollection 2019 Jul 31.

3.

A comparative multivariate analysis of nitrilase enzymes: An ensemble based computational approach.

Kumari P, Poddar R.

Comput Biol Chem. 2019 Dec;83:107095. doi: 10.1016/j.compbiolchem.2019.107095. Epub 2019 Jul 12.

PMID:
31442709
4.

GluN2A-NMDA receptor-mediated sustained Ca2+ influx leads to homocysteine-induced neuronal cell death.

Deep SN, Mitra S, Rajagopal S, Paul S, Poddar R.

J Biol Chem. 2019 Jul 19;294(29):11154-11165. doi: 10.1074/jbc.RA119.008820. Epub 2019 Jun 5.

PMID:
31167782
5.

Role of GluN2A NMDA receptor in homocysteine-induced prostaglandin E2 release from neurons.

Rajagopal S, Fitzgerald AA, Deep SN, Paul S, Poddar R.

J Neurochem. 2019 Jul;150(1):44-55. doi: 10.1111/jnc.14775. Epub 2019 Jun 20.

PMID:
31125437
6.

Hyperhomocysteinemia leads to exacerbation of ischemic brain damage: Role of GluN2A NMDA receptors.

Jindal A, Rajagopal S, Winter L, Miller JW, Jacobsen DW, Brigman J, Allan AM, Paul S, Poddar R.

Neurobiol Dis. 2019 Jul;127:287-302. doi: 10.1016/j.nbd.2019.03.012. Epub 2019 Mar 15.

PMID:
30885791
7.

Mutational analysis of phenolic acid decarboxylase from Enterobacter sp. Px6-4. towards enhancement of binding affinity: A computational approach.

Kumar P, Kumari P, Sachan SG, Poddar R.

Comput Biol Chem. 2018 Oct;76:245-255. doi: 10.1016/j.compbiolchem.2018.06.004. Epub 2018 Jul 18.

PMID:
30081341
8.

A peptide mimetic of tyrosine phosphatase STEP as a potential therapeutic agent for treatment of cerebral ischemic stroke.

Poddar R, Rajagopal S, Winter L, Allan AM, Paul S.

J Cereb Blood Flow Metab. 2019 Jun;39(6):1069-1084. doi: 10.1177/0271678X17747193. Epub 2017 Dec 7.

PMID:
29215306
9.

Challenges and advantages in wide-field optical coherence tomography angiography imaging of the human retinal and choroidal vasculature at 1.7-MHz A-scan rate.

Poddar R, Migacz JV, Schwartz DM, Werner JS, Gorczynska I.

J Biomed Opt. 2017 Oct;22(10):1-14. doi: 10.1117/1.JBO.22.10.106018.

10.

Automated long-term recording and analysis of neural activity in behaving animals.

Dhawale AK, Poddar R, Wolff SB, Normand VA, Kopelowitz E, Ölveczky BP.

Elife. 2017 Sep 8;6. pii: e27702. doi: 10.7554/eLife.27702.

11.

Mutational analysis of microbial hydroxycinnamoyl-CoA hydratase-lyase (HCHL) towards enhancement of binding affinity: A computational approach.

Kumar P, Ghosh Sachan S, Poddar R.

J Mol Graph Model. 2017 Oct;77:94-105. doi: 10.1016/j.jmgm.2017.08.014. Epub 2017 Aug 18.

PMID:
28850897
12.

Nanoelectrical and Nanoelectrochemical Imaging of Pt/p-Si and Pt/p+ -Si Electrodes.

Jiang J, Huang Z, Xiang C, Poddar R, Lewerenz HJ, Papadantonakis KM, Lewis NS, Brunschwig BS.

ChemSusChem. 2017 Nov 23;10(22):4657-4663. doi: 10.1002/cssc.201700893. Epub 2017 Aug 7.

PMID:
28636780
13.
14.

Role of AMPA receptors in homocysteine-NMDA receptor-induced crosstalk between ERK and p38 MAPK.

Poddar R, Chen A, Winter L, Rajagopal S, Paul S.

J Neurochem. 2017 Aug;142(4):560-573. doi: 10.1111/jnc.14078. Epub 2017 Jun 29.

15.

Bis[(l)prolinate-N,O]Zn: A water-soluble and recycle catalyst for various organic transformations.

Poddar R, Jain A, Kidwai M.

J Adv Res. 2017 May;8(3):245-270. doi: 10.1016/j.jare.2016.12.005. Epub 2017 Jan 9. Review.

16.

Atomic force microscopy with nanoelectrode tips for high resolution electrochemical, nanoadhesion and nanoelectrical imaging.

Nellist MR, Chen Y, Mark A, Gödrich S, Stelling C, Jiang J, Poddar R, Li C, Kumar R, Papastavrou G, Retsch M, Brunschwig BS, Huang Z, Xiang C, Boettcher SW.

Nanotechnology. 2017 Mar 3;28(9):095711. doi: 10.1088/1361-6528/aa5839.

PMID:
28139467
17.

Reliability of the pectoralis major myocutaneous flap in reconstructive oral cancer surgery in developing countries: Our experience.

Bhanja A, D'Souza DS, Roy C, Poddar RN.

Med J Armed Forces India. 2016 Dec;72(Suppl 1):S1-S7. doi: 10.1016/j.mjafi.2016.02.013. Epub 2016 May 4.

18.

Pulmonary actinomycosis: a rare case diagnosed on bronchoalveolar lavage cytology.

Sharma S, Dey P, Poddar R.

Cytopathology. 2017 Oct;28(5):436-437. doi: 10.1111/cyt.12406. Epub 2016 Dec 28. No abstract available.

PMID:
28028884
19.

Homology model, molecular dynamics simulation and novel pyrazole analogs design of Candida albicans CYP450 lanosterol 14 α-demethylase, a target enzyme for antifungal therapy.

Jacob K S, Ganguly S, Kumar P, Poddar R, Kumar A.

J Biomol Struct Dyn. 2017 May;35(7):1446-1463. doi: 10.1080/07391102.2016.1185380. Epub 2016 Aug 2.

PMID:
27142238
20.

Aging is associated with dimerization and inactivation of the brain-enriched tyrosine phosphatase STEP.

Rajagopal S, Deb I, Poddar R, Paul S.

Neurobiol Aging. 2016 May;41:25-38. doi: 10.1016/j.neurobiolaging.2016.02.004. Epub 2016 Feb 12.

21.

De Novo Assembled Wheat Transcriptomes Delineate Differentially Expressed Host Genes in Response to Leaf Rust Infection.

Chandra S, Singh D, Pathak J, Kumari S, Kumar M, Poddar R, Balyan HS, Gupta PK, Prabhu KV, Mukhopadhyay K.

PLoS One. 2016 Feb 3;11(2):e0148453. doi: 10.1371/journal.pone.0148453. eCollection 2016.

22.

Zn2+-dependent Activation of the Trk Signaling Pathway Induces Phosphorylation of the Brain-enriched Tyrosine Phosphatase STEP: MOLECULAR BASIS FOR ZN2+-INDUCED ERK MAPK ACTIVATION.

Poddar R, Rajagopal S, Shuttleworth CW, Paul S.

J Biol Chem. 2016 Jan 8;291(2):813-25. doi: 10.1074/jbc.M115.663468. Epub 2015 Nov 16.

23.
24.

Motor cortex is required for learning but not for executing a motor skill.

Kawai R, Markman T, Poddar R, Ko R, Fantana AL, Dhawale AK, Kampff AR, Ölveczky BP.

Neuron. 2015 May 6;86(3):800-12. doi: 10.1016/j.neuron.2015.03.024. Epub 2015 Apr 16.

25.

Annotation and curation of uncharacterized proteins- challenges.

Ijaq J, Chandrasekharan M, Poddar R, Bethi N, Sundararajan VS.

Front Genet. 2015 Mar 31;6:119. doi: 10.3389/fgene.2015.00119. eCollection 2015. Review.

26.
27.

Characterization and functional analysis of eugenol O-methyltransferase gene reveal metabolite shifts, chemotype specific differential expression and developmental regulation in Ocimum tenuiflorum L.

Renu IK, Haque I, Kumar M, Poddar R, Bandopadhyay R, Rai A, Mukhopadhyay K.

Mol Biol Rep. 2014 Mar;41(3):1857-70. doi: 10.1007/s11033-014-3035-7. Epub 2014 Jan 14.

PMID:
24420851
28.

A fully automated high-throughput training system for rodents.

Poddar R, Kawai R, Ölveczky BP.

PLoS One. 2013 Dec 6;8(12):e83171. doi: 10.1371/journal.pone.0083171. eCollection 2013.

29.

Neuroprotective role of a brain-enriched tyrosine phosphatase, STEP, in focal cerebral ischemia.

Deb I, Manhas N, Poddar R, Rajagopal S, Allan AM, Lombroso PJ, Rosenberg GA, Candelario-Jalil E, Paul S.

J Neurosci. 2013 Nov 6;33(45):17814-26. doi: 10.1523/JNEUROSCI.2346-12.2013.

30.

Three-dimensional anterior segment imaging in patients with type 1 Boston Keratoprosthesis with switchable full depth range swept source optical coherence tomography.

Poddar R, Cortés DE, Werner JS, Mannis MJ, Zawadzki RJ.

J Biomed Opt. 2013 Aug;18(8):86002. doi: 10.1117/1.JBO.18.8.086002. Erratum in: J Biomed Opt. 2013 Aug;18(8):089802. Raju, Poddar [corrected to Poddar, Raju].

31.

Novel crosstalk between ERK MAPK and p38 MAPK leads to homocysteine-NMDA receptor-mediated neuronal cell death.

Poddar R, Paul S.

J Neurochem. 2013 Feb;124(4):558-70. doi: 10.1111/jnc.12102. Epub 2012 Dec 26.

32.

A huge epidermoid cyst endangering life.

Banerjee N, Padhiary SK, Chattopadhyay A, Das KP, Poddar RN, Bandyopadhyay P.

J Maxillofac Oral Surg. 2011 Sep;10(3):246-9. doi: 10.1007/s12663-010-0106-8. Epub 2010 Nov 25.

33.

Intranuclear matrix metalloproteinases promote DNA damage and apoptosis induced by oxygen-glucose deprivation in neurons.

Hill JW, Poddar R, Thompson JF, Rosenberg GA, Yang Y.

Neuroscience. 2012 Sep 18;220:277-90. doi: 10.1016/j.neuroscience.2012.06.019. Epub 2012 Jun 16.

34.

Comparative analysis of different DNA-binding drugs for leishmaniasis cure: a pharmacoinformatics approach.

Chauhan N, Vidyarthi AS, Poddar R.

Chem Biol Drug Des. 2012 Jul;80(1):54-63. doi: 10.1111/j.1747-0285.2012.01329.x. Epub 2012 May 9.

PMID:
22296858
35.

Comparative multivariate analysis of codon and amino acid usage in three Leishmania genomes.

Chauhan N, Vidyarthi AS, Poddar R.

Genomics Proteomics Bioinformatics. 2011 Dec;9(6):218-28. doi: 10.1016/S1672-0229(11)60025-9.

36.
37.

Oxidative stress-induced oligomerization inhibits the activity of the non-receptor tyrosine phosphatase STEP61.

Deb I, Poddar R, Paul S.

J Neurochem. 2011 Mar;116(6):1097-111. doi: 10.1111/j.1471-4159.2010.07165.x. Epub 2011 Jan 19.

38.

NR2B-NMDA receptor mediated modulation of the tyrosine phosphatase STEP regulates glutamate induced neuronal cell death.

Poddar R, Deb I, Mukherjee S, Paul S.

J Neurochem. 2010 Dec;115(6):1350-62. doi: 10.1111/j.1471-4159.2010.07035.x. Epub 2010 Nov 2.

39.

Aqua mediated synthesis of 2-amino-6-benzothiazol-2-ylsulfanyl-chromenes and its in vitro study, explanation of the structure-activity relationships (SARs) as antibacterial agent.

Kidwai M, Poddar R, Bhardwaj S, Singh S, Luthra PM.

Eur J Med Chem. 2010 Nov;45(11):5031-8. doi: 10.1016/j.ejmech.2010.08.010. Epub 2010 Aug 12.

PMID:
20810191
40.

C-Arylation reactions catalyzed by CuO-nanoparticles under ligand free conditions.

Kidwai M, Bhardwaj S, Poddar R.

Beilstein J Org Chem. 2010 Apr 15;6:35. doi: 10.3762/bjoc.6.35.

41.

Modifications of ampicillin structure and its implication: an in-silico approach.

Poddar R, Mathur A, Kawalekar OU, Rai A, Bhatnagar A.

Int J Bioinform Res Appl. 2009;5(6):616-24.

PMID:
19887336
42.

Study of codon bias perspective of fungal xylanase gene by multivariate analysis.

Shrivastava S, Poddar R, Shukla P, Mukhopadhyay K.

Bioinformation. 2009 Jul 27;3(10):425-9.

43.

Homocysteine-NMDA receptor-mediated activation of extracellular signal-regulated kinase leads to neuronal cell death.

Poddar R, Paul S.

J Neurochem. 2009 Aug;110(3):1095-106. doi: 10.1111/j.1471-4159.2009.06207.x. Epub 2009 Jun 5.

44.

N-acylation of ethanolamine using lipase: a chemoselective catalyst.

Kidwai M, Poddar R, Mothsra P.

Beilstein J Org Chem. 2009 Mar 25;5:10. doi: 10.3762/bjoc.5.10.

45.

210-Polonium studies in some environmental and biological matrices of Domiasiat uranium deposit area, West Khasi Hills, Meghalaya, India.

Marbaniang DG, Poddar RK, Nongkynrih P, Khathing DT.

Environ Monit Assess. 2010 Mar;162(1-4):347-53. doi: 10.1007/s10661-009-0800-5. Epub 2009 Feb 26.

PMID:
19242810
46.

Study of the variation and the effect of geo-chemical composition on the external background radiation level.

Marbaniang DG, Poddar RK, Nongkynrih P.

Environ Monit Assess. 2009 May;152(1-4):223-30. doi: 10.1007/s10661-008-0310-x. Epub 2008 May 22.

PMID:
18496759
47.

Evaluation of codon bias perspectives in phage therapy of Mycobacterium tuberculosis by multivariate analysis.

Ranjan A, Vidyarthi AS, Poddar R.

In Silico Biol. 2007;7(4-5):423-31.

PMID:
18391235
48.
49.

Altered claudin expression is a feature of chronic plaque psoriasis.

Watson RE, Poddar R, Walker JM, McGuill I, Hoare LM, Griffiths CE, O'neill CA.

J Pathol. 2007 Aug;212(4):450-8.

PMID:
17582238
50.

The copper(II) complexes di-mu-bromo-bis{[2,6-bis(pyrazol-1-yl)pyridine]perchloratocopper(II)} and [2,6-bis(pyrazol-1-yl)pyridine]dibromocopper(II).

Chakrabarty S, Poddar RK, Poulsen RD, Thompson AL, Howard JA.

Acta Crystallogr C. 2004 Dec;60(Pt 12):m628-30. Epub 2004 Nov 11.

PMID:
15579948

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