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Items: 14

1.

Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data.

Zhou P, Resendez SL, Rodriguez-Romaguera J, Jimenez JC, Neufeld SQ, Giovannucci A, Friedrich J, Pnevmatikakis EA, Stuber GD, Hen R, Kheirbek MA, Sabatini BL, Kass RE, Paninski L.

Elife. 2018 Feb 22;7. pii: e28728. doi: 10.7554/eLife.28728.

2.

NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data.

Pnevmatikakis EA, Giovannucci A.

J Neurosci Methods. 2017 Nov 1;291:83-94. doi: 10.1016/j.jneumeth.2017.07.031. Epub 2017 Aug 3.

3.

Automated gesture tracking in head-fixed mice.

Giovannucci A, Pnevmatikakis EA, Deverett B, Pereira T, Fondriest J, Brady MJ, Wang SS, Abbas W, Parés P, Masip D.

J Neurosci Methods. 2018 Apr 15;300:184-195. doi: 10.1016/j.jneumeth.2017.07.014. Epub 2017 Jul 17.

4.

Population-Level Representation of a Temporal Sequence Underlying Song Production in the Zebra Finch.

Picardo MA, Merel J, Katlowitz KA, Vallentin D, Okobi DE, Benezra SE, Clary RC, Pnevmatikakis EA, Paninski L, Long MA.

Neuron. 2016 May 18;90(4):866-76. doi: 10.1016/j.neuron.2016.02.016.

5.

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.

Pnevmatikakis EA, Soudry D, Gao Y, Machado TA, Merel J, Pfau D, Reardon T, Mu Y, Lacefield C, Yang W, Ahrens M, Bruno R, Jessell TM, Peterka DS, Yuste R, Paninski L.

Neuron. 2016 Jan 20;89(2):285-99. doi: 10.1016/j.neuron.2015.11.037. Epub 2016 Jan 7.

6.

Age-related homeostatic midchannel proteolysis of neuronal L-type voltage-gated Ca²⁺ channels.

Michailidis IE, Abele-Henckels K, Zhang WK, Lin B, Yu Y, Geyman LS, Ehlers MD, Pnevmatikakis EA, Yang J.

Neuron. 2014 Jun 4;82(5):1045-57. doi: 10.1016/j.neuron.2014.04.017.

7.

Spatiotemporal receptive fields of barrel cortex revealed by reverse correlation of synaptic input.

Ramirez A, Pnevmatikakis EA, Merel J, Paninski L, Miller KD, Bruno RM.

Nat Neurosci. 2014 Jun;17(6):866-75. doi: 10.1038/nn.3720. Epub 2014 May 18.

8.

The power of connectivity: identity preserving transformations on visual streams in the spike domain.

Lazar AA, Pnevmatikakis EA, Zhou Y.

Neural Netw. 2013 Aug;44:22-35. doi: 10.1016/j.neunet.2013.02.013. Epub 2013 Mar 14.

PMID:
23545540
9.

Fast spatiotemporal smoothing of calcium measurements in dendritic trees.

Pnevmatikakis EA, Kelleher K, Chen R, Saggau P, Josić K, Paninski L.

PLoS Comput Biol. 2012 Jun;8(6):e1002569. doi: 10.1371/journal.pcbi.1002569. Epub 2012 Jun 28.

10.

Video time encoding machines.

Lazar AA, Pnevmatikakis EA.

IEEE Trans Neural Netw. 2011 Mar;22(3):461-73. doi: 10.1109/TNN.2010.2103323. Epub 2011 Feb 4.

11.

Encoding natural scenes with neural circuits with random thresholds.

Lazar AA, Pnevmatikakis EA, Zhou Y.

Vision Res. 2010 Oct 28;50(22):2200-12. doi: 10.1016/j.visres.2010.03.015. Epub 2010 Mar 27.

12.

Consistent recovery of sensory stimuli encoded with MIMO neural circuits.

Lazar AA, Pnevmatikakis EA.

Comput Intell Neurosci. 2010:469658. doi: 10.1155/2010/469658. Epub 2009 Sep 22.

13.

Reconstruction of Sensory Stimuli Encoded with Integrate-and-Fire Neurons with Random Thresholds.

Lazar AA, Pnevmatikakis EA.

EURASIP J Adv Signal Process. 2009 May 25;2009:682930.

14.

Faithful representation of stimuli with a population of integrate-and-fire neurons.

Lazar AA, Pnevmatikakis EA.

Neural Comput. 2008 Nov;20(11):2715-44. doi: 10.1162/neco.2008.06-07-559.

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