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Items: 46

1.

A molecular clone of Chronic Bee Paralysis Virus (CBPV) causes mortality in honey bee pupae (Apis mellifera).

Seitz K, Buczolich K, Dikunová A, Plevka P, Power K, Rümenapf T, Lamp B.

Sci Rep. 2019 Nov 7;9(1):16274. doi: 10.1038/s41598-019-52822-1.

2.

Structure and genome ejection mechanism of Staphylococcus aureus phage P68.

Hrebík D, Štveráková D, Škubník K, Füzik T, Pantůček R, Plevka P.

Sci Adv. 2019 Oct 16;5(10):eaaw7414. doi: 10.1126/sciadv.aaw7414. eCollection 2019 Oct.

3.

Enterovirus particles expel capsid pentamers to enable genome release.

Buchta D, Füzik T, Hrebík D, Levdansky Y, Sukeník L, Mukhamedova L, Moravcová J, Vácha R, Plevka P.

Nat Commun. 2019 Mar 8;10(1):1138. doi: 10.1038/s41467-019-09132-x.

4.

Virion structure and genome delivery mechanism of sacbrood honeybee virus.

Procházková M, Füzik T, Škubník K, Moravcová J, Ubiparip Z, Přidal A, Plevka P.

Proc Natl Acad Sci U S A. 2018 Jul 24;115(30):7759-7764. doi: 10.1073/pnas.1722018115. Epub 2018 Jul 9.

5.

Hyaluronic Acid Surface Modified Liposomes Prepared via Orthogonal Aminoxy Coupling: Synthesis of Nontoxic Aminoxylipids Based on Symmetrically α-Branched Fatty Acids, Preparation of Liposomes by Microfluidic Mixing, and Targeting to Cancer Cells Expressing CD44.

Bartheldyová E, Effenberg R, Mašek J, Procházka L, Knötigová PT, Kulich P, Hubatka F, Velínská K, Zelníčková J, Zouharová D, Fojtíková M, Hrebík D, Plevka P, Mikulík R, Miller AD, Macaulay S, Zyka D, Drož L, Raška M, Ledvina M, Turánek J.

Bioconjug Chem. 2018 Jul 18;29(7):2343-2356. doi: 10.1021/acs.bioconjchem.8b00311. Epub 2018 Jun 25.

PMID:
29898364
6.

Structure of tick-borne encephalitis virus and its neutralization by a monoclonal antibody.

Füzik T, Formanová P, Růžek D, Yoshii K, Niedrig M, Plevka P.

Nat Commun. 2018 Jan 30;9(1):436. doi: 10.1038/s41467-018-02882-0.

7.

Viral discovery and diversity in trypanosomatid protozoa with a focus on relatives of the human parasite Leishmania.

Grybchuk D, Akopyants NS, Kostygov AY, Konovalovas A, Lye LF, Dobson DE, Zangger H, Fasel N, Butenko A, Frolov AO, Votýpka J, d'Avila-Levy CM, Kulich P, Moravcová J, Plevka P, Rogozin IB, Serva S, Lukeš J, Beverley SM, Yurchenko V.

Proc Natl Acad Sci U S A. 2018 Jan 16;115(3):E506-E515. doi: 10.1073/pnas.1717806115. Epub 2017 Dec 28.

8.

Structure and dynamics of the RNAPII CTDsome with Rtt103.

Jasnovidova O, Klumpler T, Kubicek K, Kalynych S, Plevka P, Stefl R.

Proc Natl Acad Sci U S A. 2017 Oct 17;114(42):11133-11138. doi: 10.1073/pnas.1712450114. Epub 2017 Oct 4.

9.

Staphylococcus sciuri bacteriophages double-convert for staphylokinase and phospholipase, mediate interspecies plasmid transduction, and package mecA gene.

Zeman M, Mašlaňová I, Indráková A, Šiborová M, Mikulášek K, Bendíčková K, Plevka P, Vrbovská V, Zdráhal Z, Doškař J, Pantůček R.

Sci Rep. 2017 Apr 13;7:46319. doi: 10.1038/srep46319.

10.

Structure of deformed wing virus, a major honey bee pathogen.

Škubník K, Nováček J, Füzik T, Přidal A, Paxton RJ, Plevka P.

Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):3210-3215. doi: 10.1073/pnas.1615695114. Epub 2017 Mar 7.

11.

Virion Structure of Black Queen Cell Virus, a Common Honeybee Pathogen.

Spurny R, Přidal A, Pálková L, Kiem HKT, de Miranda JR, Plevka P.

J Virol. 2017 Feb 28;91(6). pii: e02100-16. doi: 10.1128/JVI.02100-16. Print 2017 Mar 15.

12.

Cryo-EM study of slow bee paralysis virus at low pH reveals iflavirus genome release mechanism.

Kalynych S, Füzik T, Přidal A, de Miranda J, Plevka P.

Proc Natl Acad Sci U S A. 2017 Jan 17;114(3):598-603. doi: 10.1073/pnas.1616562114. Epub 2017 Jan 4.

13.

Cryo-electron Microscopy Study of the Genome Release of the Dicistrovirus Israeli Acute Bee Paralysis Virus.

Mullapudi E, Füzik T, Přidal A, Plevka P.

J Virol. 2017 Jan 31;91(4). pii: e02060-16. doi: 10.1128/JVI.02060-16. Print 2017 Feb 15.

14.

Structure of Aichi Virus 1 and Its Empty Particle: Clues to Kobuvirus Genome Release Mechanism.

Sabin C, Füzik T, Škubník K, Pálková L, Lindberg AM, Plevka P.

J Virol. 2016 Nov 14;90(23):10800-10810. doi: 10.1128/JVI.01601-16. Print 2016 Dec 1.

15.

Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate.

Nováček J, Šiborová M, Benešík M, Pantůček R, Doškař J, Plevka P.

Proc Natl Acad Sci U S A. 2016 Aug 16;113(33):9351-6. doi: 10.1073/pnas.1605883113. Epub 2016 Jul 28.

16.

Virion Structure of Israeli Acute Bee Paralysis Virus.

Mullapudi E, Přidal A, Pálková L, de Miranda JR, Plevka P.

J Virol. 2016 Aug 26;90(18):8150-9. doi: 10.1128/JVI.00854-16. Print 2016 Sep 15.

17.

Structure and Genome Release Mechanism of the Human Cardiovirus Saffold Virus 3.

Mullapudi E, Nováček J, Pálková L, Kulich P, Lindberg AM, van Kuppeveld FJ, Plevka P.

J Virol. 2016 Aug 12;90(17):7628-39. doi: 10.1128/JVI.00746-16. Print 2016 Sep 1.

18.

Virion Structure of Iflavirus Slow Bee Paralysis Virus at 2.6-Angstrom Resolution.

Kalynych S, Přidal A, Pálková L, Levdansky Y, de Miranda JR, Plevka P.

J Virol. 2016 Jul 27;90(16):7444-7455. doi: 10.1128/JVI.00680-16. Print 2016 Aug 15.

19.

The use of noncrystallographic symmetry averaging to solve structures from data affected by perfect hemihedral twinning.

Sabin C, Plevka P.

Acta Crystallogr F Struct Biol Commun. 2016 Mar;72(Pt 3):188-97. doi: 10.1107/S2053230X16000923. Epub 2016 Feb 16.

20.

The Structure of Human Parechovirus 1 Reveals an Association of the RNA Genome with the Capsid.

Kalynych S, Pálková L, Plevka P.

J Virol. 2015 Nov 18;90(3):1377-86. doi: 10.1128/JVI.02346-15. Print 2016 Feb 1.

21.

Structure of the 3.3MDa, in vitro assembled, hubless bacteriophage T4 baseplate.

Yap ML, Klose T, Plevka P, Aksyuk A, Zhang X, Arisaka F, Rossmann MG.

J Struct Biol. 2014 Aug;187(2):95-102. doi: 10.1016/j.jsb.2014.06.008. Epub 2014 Jul 3.

22.

Neutralizing antibodies can initiate genome release from human enterovirus 71.

Plevka P, Lim PY, Perera R, Cardosa J, Suksatu A, Kuhn RJ, Rossmann MG.

Proc Natl Acad Sci U S A. 2014 Feb 11;111(6):2134-9. doi: 10.1073/pnas.1320624111. Epub 2014 Jan 27.

23.

Using cryoEM reconstruction and phase extension to determine crystal structure of bacteriophage ϕ6 major capsid protein.

Nemecek D, Plevka P, Boura E.

Protein J. 2013 Dec;32(8):635-40. doi: 10.1007/s10930-013-9526-x.

PMID:
24293129
24.

Rubella virus capsid protein structure and its role in virus assembly and infection.

Mangala Prasad V, Willows SD, Fokine A, Battisti AJ, Sun S, Plevka P, Hobman TC, Rossmann MG.

Proc Natl Acad Sci U S A. 2013 Dec 10;110(50):20105-10. doi: 10.1073/pnas.1316681110. Epub 2013 Nov 26.

25.

Mechanism for maturation-related reorganization of flavivirus glycoproteins.

Plevka P, Battisti AJ, Sheng J, Rossmann MG.

J Struct Biol. 2014 Jan;185(1):27-31. doi: 10.1016/j.jsb.2013.11.001. Epub 2013 Nov 16.

26.

The structure and host entry of an invertebrate parvovirus.

Meng G, Zhang X, Plevka P, Yu Q, Tijssen P, Rossmann MG.

J Virol. 2013 Dec;87(23):12523-30. doi: 10.1128/JVI.01822-13. Epub 2013 Sep 11.

27.

Subunit folds and maturation pathway of a dsRNA virus capsid.

Nemecek D, Boura E, Wu W, Cheng N, Plevka P, Qiao J, Mindich L, Heymann JB, Hurley JH, Steven AC.

Structure. 2013 Aug 6;21(8):1374-83. doi: 10.1016/j.str.2013.06.007. Epub 2013 Jul 25.

28.

Obstruction of dengue virus maturation by Fab fragments of the 2H2 antibody.

Wang Z, Li L, Pennington JG, Sheng J, Yap ML, Plevka P, Meng G, Sun L, Jiang W, Rossmann MG.

J Virol. 2013 Aug;87(16):8909-15. doi: 10.1128/JVI.00472-13. Epub 2013 Jun 5.

29.

Dengue structure differs at the temperatures of its human and mosquito hosts.

Zhang X, Sheng J, Plevka P, Kuhn RJ, Diamond MS, Rossmann MG.

Proc Natl Acad Sci U S A. 2013 Apr 23;110(17):6795-9. doi: 10.1073/pnas.1304300110. Epub 2013 Apr 8.

30.

Structure of human enterovirus 71 in complex with a capsid-binding inhibitor.

Plevka P, Perera R, Yap ML, Cardosa J, Kuhn RJ, Rossmann MG.

Proc Natl Acad Sci U S A. 2013 Apr 2;110(14):5463-7. doi: 10.1073/pnas.1222379110. Epub 2013 Mar 18.

31.

Sample preparation induced artifacts in cryo-electron tomographs.

Plevka P, Battisti AJ, Winkler DC, Tars K, Holdaway HA, Bator CM, Rossmann MG.

Microsc Microanal. 2012 Oct;18(5):1043-8. doi: 10.1017/S1431927612001298. Epub 2012 Oct 8.

32.

Structure determination of enterovirus 71.

Plevka P, Perera R, Cardosa J, Kuhn RJ, Rossmann MG.

Acta Crystallogr D Biol Crystallogr. 2012 Sep;68(Pt 9):1217-22. doi: 10.1107/S0907444912025772. Epub 2012 Aug 18.

33.

Structure and assembly of a paramyxovirus matrix protein.

Battisti AJ, Meng G, Winkler DC, McGinnes LW, Plevka P, Steven AC, Morrison TG, Rossmann MG.

Proc Natl Acad Sci U S A. 2012 Aug 28;109(35):13996-4000. doi: 10.1073/pnas.1210275109. Epub 2012 Aug 13.

34.

Cryo-electron tomography of rubella virus.

Battisti AJ, Yoder JD, Plevka P, Winkler DC, Prasad VM, Kuhn RJ, Frey TK, Steven AC, Rossmann MG.

J Virol. 2012 Oct;86(20):11078-85. Epub 2012 Aug 1.

35.

Crystal structure of human enterovirus 71.

Plevka P, Perera R, Cardosa J, Kuhn RJ, Rossmann MG.

Science. 2012 Jun 8;336(6086):1274. doi: 10.1126/science.1218713. Epub 2012 Mar 1.

36.

Analysis of phases in the structure determination of an icosahedral virus.

Plevka P, Kaufmann B, Rossmann MG.

Acta Crystallogr D Biol Crystallogr. 2011 Jun;67(Pt 6):568-77. doi: 10.1107/S090744491101448X. Epub 2011 May 17.

37.

Maturation of flaviviruses starts from one or more icosahedrally independent nucleation centres.

Plevka P, Battisti AJ, Junjhon J, Winkler DC, Holdaway HA, Keelapang P, Sittisombut N, Kuhn RJ, Steven AC, Rossmann MG.

EMBO Rep. 2011 Jun;12(6):602-6. doi: 10.1038/embor.2011.75. Epub 2011 May 13. Erratum in: EMBO Rep. 2011 Nov;12(11):1204.

38.

Future prospects.

Rossmann MG, Battisti AJ, Plevka P.

Adv Protein Chem Struct Biol. 2011;82:101-21. doi: 10.1016/B978-0-12-386507-6.00005-1. Review.

PMID:
21501821
39.

Structure of a packaging-defective mutant of minute virus of mice indicates that the genome is packaged via a pore at a 5-fold axis.

Plevka P, Hafenstein S, Li L, D'Abrgamo A Jr, Cotmore SF, Rossmann MG, Tattersall P.

J Virol. 2011 May;85(10):4822-7. doi: 10.1128/JVI.02598-10. Epub 2011 Mar 2.

40.

Structure of Bombyx mori densovirus 1, a silkworm pathogen.

Kaufmann B, El-Far M, Plevka P, Bowman VD, Li Y, Tijssen P, Rossmann MG.

J Virol. 2011 May;85(10):4691-7. doi: 10.1128/JVI.02688-10. Epub 2011 Mar 2.

41.

Interaction of decay-accelerating factor with echovirus 7.

Plevka P, Hafenstein S, Harris KG, Cifuente JO, Zhang Y, Bowman VD, Chipman PR, Bator CM, Lin F, Medof ME, Rossmann MG.

J Virol. 2010 Dec;84(24):12665-74. doi: 10.1128/JVI.00837-10. Epub 2010 Sep 29.

42.

Crystallization and preliminary X-ray diffraction analysis of West Nile virus.

Kaufmann B, Plevka P, Kuhn RJ, Rossmann MG.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 May 1;66(Pt 5):558-62. doi: 10.1107/S1744309110009899. Epub 2010 Apr 30.

43.

The structure of bacteriophage phiCb5 reveals a role of the RNA genome and metal ions in particle stability and assembly.

Plevka P, Kazaks A, Voronkova T, Kotelovica S, Dishlers A, Liljas L, Tars K.

J Mol Biol. 2009 Aug 21;391(3):635-47. doi: 10.1016/j.jmb.2009.06.047. Epub 2009 Jun 23.

PMID:
19559027
44.

Structure and stability of icosahedral particles of a covalent coat protein dimer of bacteriophage MS2.

Plevka P, Tars K, Liljas L.

Protein Sci. 2009 Aug;18(8):1653-61. doi: 10.1002/pro.184.

45.

Crystal packing of a bacteriophage MS2 coat protein mutant corresponds to octahedral particles.

Plevka P, Tars K, Liljas L.

Protein Sci. 2008 Oct;17(10):1731-9. doi: 10.1110/ps.036905.108. Epub 2008 Jul 28.

46.

The three-dimensional structure of ryegrass mottle virus at 2.9 A resolution.

Plevka P, Tars K, Zeltins A, Balke I, Truve E, Liljas L.

Virology. 2007 Dec 20;369(2):364-74. Epub 2007 Sep 19.

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