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Items: 7

1.

Design, implementation, and operation of a rapid, robust named entity recognition web service.

Pletscher-Frankild S, Jensen LJ.

J Cheminform. 2019 Mar 8;11(1):19. doi: 10.1186/s13321-019-0344-9.

2.

Comprehensive comparison of large-scale tissue expression datasets.

Santos A, Tsafou K, Stolte C, Pletscher-Frankild S, O'Donoghue SI, Jensen LJ.

PeerJ. 2015 Jun 30;3:e1054. doi: 10.7717/peerj.1054. eCollection 2015.

3.

Mass spectrometry of human leukocyte antigen class I peptidomes reveals strong effects of protein abundance and turnover on antigen presentation.

Bassani-Sternberg M, Pletscher-Frankild S, Jensen LJ, Mann M.

Mol Cell Proteomics. 2015 Mar;14(3):658-73. doi: 10.1074/mcp.M114.042812. Epub 2015 Jan 9.

4.

DISEASES: text mining and data integration of disease-gene associations.

Pletscher-Frankild S, Pallejà A, Tsafou K, Binder JX, Jensen LJ.

Methods. 2015 Mar;74:83-9. doi: 10.1016/j.ymeth.2014.11.020. Epub 2014 Dec 5.

5.

COMPARTMENTS: unification and visualization of protein subcellular localization evidence.

Binder JX, Pletscher-Frankild S, Tsafou K, Stolte C, O'Donoghue SI, Schneider R, Jensen LJ.

Database (Oxford). 2014 Feb 25;2014:bau012. doi: 10.1093/database/bau012. Print 2014.

6.

STITCH 4: integration of protein-chemical interactions with user data.

Kuhn M, Szklarczyk D, Pletscher-Frankild S, Blicher TH, von Mering C, Jensen LJ, Bork P.

Nucleic Acids Res. 2014 Jan;42(Database issue):D401-7. doi: 10.1093/nar/gkt1207. Epub 2013 Nov 28.

7.

Protein-driven inference of miRNA-disease associations.

Mørk S, Pletscher-Frankild S, Palleja Caro A, Gorodkin J, Jensen LJ.

Bioinformatics. 2014 Feb 1;30(3):392-7. doi: 10.1093/bioinformatics/btt677. Epub 2013 Nov 21.

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