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Items: 1 to 50 of 83

1.

Mass Measurements of Focal Adhesions in Single Cells Using High Resolution Surface Plasmon Resonance Microscopy.

Peterson AW, Halter M, Tona A, Plant AL, Elliott JT.

Proc SPIE Int Soc Opt Eng. 2018;10509. pii: 1050905. doi: 10.1117/12.2290776. Epub 2018 Feb 23.

2.

How measurement science can improve confidence in research results.

Plant AL, Becker CA, Hanisch RJ, Boisvert RF, Possolo AM, Elliott JT.

PLoS Biol. 2018 Apr 23;16(4):e2004299. doi: 10.1371/journal.pbio.2004299. eCollection 2018 Apr.

3.

Opportunities and Challenges in Implementation of Multiparameter Single Cell Analysis Platforms for Clinical Translation.

Keating SM, Taylor DL, Plant AL, Litwack ED, Kuhn P, Greenspan EJ, Hartshorn CM, Sigman CC, Kelloff GJ, Chang DD, Friberg G, Lee JSH, Kuida K.

Clin Transl Sci. 2018 May;11(3):267-276. doi: 10.1111/cts.12536. Epub 2018 Mar 2. Review.

4.

Evaluating the quality of a cell counting measurement process via a dilution series experimental design.

Sarkar S, Lund SP, Vyzasatya R, Vanguri P, Elliott JT, Plant AL, Lin-Gibson S.

Cytotherapy. 2017 Dec;19(12):1509-1521. doi: 10.1016/j.jcyt.2017.08.014. Epub 2017 Oct 14.

PMID:
29037942
5.

A novel measure and significance testing in data analysis of cell image segmentation.

Wu JC, Halter M, Kacker RN, Elliott JT, Plant AL.

BMC Bioinformatics. 2017 Mar 14;18(1):168. doi: 10.1186/s12859-017-1527-x.

6.

Surface plasmon resonance microscopy: Achieving a quantitative optical response.

Peterson AW, Halter M, Plant AL, Elliott JT.

Rev Sci Instrum. 2016 Sep;87(9):093703.

7.

Comparability: manufacturing, characterization and controls, report of a UK Regenerative Medicine Platform Pluripotent Stem Cell Platform Workshop, Trinity Hall, Cambridge, 14-15 September 2015.

Williams DJ, Archer R, Archibald P, Bantounas I, Baptista R, Barker R, Barry J, Bietrix F, Blair N, Braybrook J, Campbell J, Canham M, Chandra A, Foldes G, Gilmanshin R, Girard M, Gorjup E, Hewitt Z, Hourd P, Hyllner J, Jesson H, Kee J, Kerby J, Kotsopoulou N, Kowalski S, Leidel C, Marshall D, Masi L, McCall M, McCann C, Medcalf N, Moore H, Ozawa H, Pan D, Parmar M, Plant AL, Reinwald Y, Sebastian S, Stacey G, Thomas RJ, Thomas D, Thurman-Newell J, Turner M, Vitillo L, Wall I, Wilson A, Wolfrum J, Yang Y, Zimmerman H.

Regen Med. 2016 Jul;11(5):483-92. doi: 10.2217/rme-2016-0053. Epub 2016 Jul 12. Erratum in: Regen Med. 2016 Oct;11(7):743. Vitillio, Loriana [corrected to Vitillo, Loriana].

8.

Strategies for Achieving Measurement Assurance for Cell Therapy Products.

Simon CG Jr, Lin-Gibson S, Elliott JT, Sarkar S, Plant AL.

Stem Cells Transl Med. 2016 Jun;5(6):705-8.

9.

Measurement Challenges for CAR-T Biomanufacturing: Highlights from a Meeting Sponsored by the National Institute of Standards and Technology (NIST).

Lin-Gibson S, Rogers KC, Plant AL.

Hum Gene Ther Clin Dev. 2016 Jun;27(2):66-8. doi: 10.1089/humc.2016.29014.com. No abstract available.

PMID:
27314912
10.

Standards for Cell Line Authentication and Beyond.

Almeida JL, Cole KD, Plant AL.

PLoS Biol. 2016 Jun 14;14(6):e1002476. doi: 10.1371/journal.pbio.1002476. eCollection 2016 Jun.

11.

Large-scale time-lapse microscopy of Oct4 expression in human embryonic stem cell colonies.

Bhadriraju K, Halter M, Amelot J, Bajcsy P, Chalfoun J, Vandecreme A, Mallon BS, Park KY, Sista S, Elliott JT, Plant AL.

Stem Cell Res. 2016 Jul;17(1):122-9. doi: 10.1016/j.scr.2016.05.012. Epub 2016 May 22.

12.

High resolution surface plasmon resonance imaging for single cells.

Peterson AW, Halter M, Tona A, Plant AL.

BMC Cell Biol. 2014 Dec 1;15:35. doi: 10.1186/1471-2121-15-35.

13.

Improved reproducibility by assuring confidence in measurements in biomedical research.

Plant AL, Locascio LE, May WE, Gallagher PD.

Nat Methods. 2014 Sep;11(9):895-8. doi: 10.1038/nmeth.3076.

PMID:
25166868
14.

An automated protocol for performance benchmarking a widefield fluorescence microscope.

Halter M, Bier E, DeRose PC, Cooksey GA, Choquette SJ, Plant AL, Elliott JT.

Cytometry A. 2014 Nov;85(11):978-85. doi: 10.1002/cyto.a.22519. Epub 2014 Aug 13.

15.

The effect of high vacuum on the mechanical properties and bioactivity of collagen fibril matrices.

Anderton CR, DelRio FW, Bhadriraju K, Plant AL.

Biointerphases. 2013 Dec;8(1):2. doi: 10.1186/1559-4106-8-2. Epub 2013 Jan 17.

PMID:
24706115
16.

Translating stem cell research from the bench to the clinic: a need for better quality data.

Plant AL, Parker GC.

Stem Cells Dev. 2013 Sep 15;22(18):2457-8. doi: 10.1089/scd.2013.0188. Epub 2013 May 24.

PMID:
23597110
17.

Cell spreading and proliferation in response to the composition and mechanics of engineered fibrillar extracellular matrices.

Chen AK, Delrio FW, Peterson AW, Chung KH, Bhadiraju K, Plant AL.

Biotechnol Bioeng. 2013 Oct;110(10):2731-41. doi: 10.1002/bit.24921. Epub 2013 Apr 22.

PMID:
23568715
18.

Predicting rates of cell state change caused by stochastic fluctuations using a data-driven landscape model.

Sisan DR, Halter M, Hubbard JB, Plant AL.

Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):19262-7. doi: 10.1073/pnas.1207544109. Epub 2012 Oct 30.

19.

Biological imaging software tools.

Eliceiri KW, Berthold MR, Goldberg IG, Ibáñez L, Manjunath BS, Martone ME, Murphy RF, Peng H, Plant AL, Roysam B, Stuurman N, Swedlow JR, Tomancak P, Carpenter AE.

Nat Methods. 2012 Jun 28;9(7):697-710. doi: 10.1038/nmeth.2084. Erratum in: Nat Methods. 2012 Oct;9(10):1031. Stuurmann, Nico [corrected to Stuurman, Nico].

20.

Quantitative methods to characterize morphological properties of cell lines.

Mancia A, Elliott JT, Halter M, Bhadriraju K, Tona A, Spurlin TA, Middlebrooks BL, Baatz JE, Warr GW, Plant AL.

Biotechnol Prog. 2012 Jul;28(4):1069-78. doi: 10.1002/btpr.1564. Epub 2012 Jun 27.

PMID:
22619183
21.

New concepts for building vocabulary for cell image ontologies.

Plant AL, Elliott JT, Bhat TN.

BMC Bioinformatics. 2011 Dec 21;12:487. doi: 10.1186/1471-2105-12-487.

22.

Cell cycle dependent TN-C promoter activity determined by live cell imaging.

Halter M, Sisan DR, Chalfoun J, Stottrup BL, Cardone A, Dima AA, Tona A, Plant AL, Elliott JT.

Cytometry A. 2011 Mar;79(3):192-202. doi: 10.1002/cyto.a.21028.

23.

Clone history shapes Populus drought responses.

Raj S, Bräutigam K, Hamanishi ET, Wilkins O, Thomas BR, Schroeder W, Mansfield SD, Plant AL, Campbell MM.

Proc Natl Acad Sci U S A. 2011 Jul 26;108(30):12521-6. doi: 10.1073/pnas.1103341108. Epub 2011 Jul 11.

24.

Comparison of segmentation algorithms for fluorescence microscopy images of cells.

Dima AA, Elliott JT, Filliben JJ, Halter M, Peskin A, Bernal J, Kociolek M, Brady MC, Tang HC, Plant AL.

Cytometry A. 2011 Jul;79(7):545-59. doi: 10.1002/cyto.a.21079. Epub 2011 Jun 14.

25.

Reproducibility and robustness of a real-time microfluidic cell toxicity assay.

Cooksey GA, Elliott JT, Plant AL.

Anal Chem. 2011 May 15;83(10):3890-6. doi: 10.1021/ac200273f. Epub 2011 Apr 20.

PMID:
21506521
26.

Characterization of collagen fibrils films formed on polydimethylsiloxane surfaces for microfluidic applications.

Spurlin TA, Forry SP, Cooksey GA, Plant AL.

Langmuir. 2010 Sep 7;26(17):14111-7. doi: 10.1021/la102150s.

PMID:
20666411
27.

Using surface plasmon resonance imaging to probe dynamic interactions between cells and extracellular matrix.

Peterson AW, Halter M, Tona A, Bhadriraju K, Plant AL.

Cytometry A. 2010 Sep;77(9):895-903. doi: 10.1002/cyto.a.20938.

28.

Intraspecific variation in the Populus balsamifera drought transcriptome.

Hamanishi ET, Raj S, Wilkins O, Thomas BR, Mansfield SD, Plant AL, Campbell MM.

Plant Cell Environ. 2010 Oct;33(10):1742-55. doi: 10.1111/j.1365-3040.2010.02179.x.

29.

Nanomechanical properties of thin films of type I collagen fibrils.

Chung KH, Bhadriraju K, Spurlin TA, Cook RF, Plant AL.

Langmuir. 2010 Mar 2;26(5):3629-36. doi: 10.1021/la903073v.

PMID:
20104910
30.

A noninvasive thin film sensor for monitoring oxygen tension during in vitro cell culture.

Thomas PC, Halter M, Tona A, Raghavan SR, Plant AL, Forry SP.

Anal Chem. 2009 Nov 15;81(22):9239-46. doi: 10.1021/ac9013379.

PMID:
19860390
31.

The relative roles of collagen adhesive receptor DDR2 activation and matrix stiffness on the downregulation of focal adhesion kinase in vascular smooth muscle cells.

Bhadriraju K, Chung KH, Spurlin TA, Haynes RJ, Elliott JT, Plant AL.

Biomaterials. 2009 Dec;30(35):6687-94. doi: 10.1016/j.biomaterials.2009.08.036. Epub 2009 Sep 16.

PMID:
19762078
32.

The treatment of collagen fibrils by tissue transglutaminase to promote vascular smooth muscle cell contractile signaling.

Spurlin TA, Bhadriraju K, Chung KH, Tona A, Plant AL.

Biomaterials. 2009 Oct;30(29):5486-96. doi: 10.1016/j.biomaterials.2009.07.014. Epub 2009 Jul 28.

PMID:
19640581
33.

A mechanistically relevant cytotoxicity assay based on the detection of cellular GFP.

Halter M, Almeida JL, Tona A, Cole KD, Plant AL, Elliott JT.

Assay Drug Dev Technol. 2009 Aug;7(4):356-65. doi: 10.1089/adt.2009.192.

PMID:
19530892
34.

A vacuum manifold for rapid world-to-chip connectivity of complex PDMS microdevices.

Cooksey GA, Plant AL, Atencia J.

Lab Chip. 2009 May 7;9(9):1298-300. doi: 10.1039/b820683j. Epub 2009 Feb 17.

PMID:
19370253
35.

Surface plasmon resonance imaging of cells and surface-associated fibronectin.

Peterson AW, Halter M, Tona A, Bhadriraju K, Plant AL.

BMC Cell Biol. 2009 Feb 26;10:16. doi: 10.1186/1471-2121-10-16.

36.

Synopsis of the Food and Drug Administration-National Institute of Standards and Technology co-sponsored "In Vitro Analyses of Cell/Scaffold Products" Workshop.

McCright B, Dang JM, Hursh DA, Kaplan DS, Ballica R, Benton K, Plant AL.

Tissue Eng Part A. 2009 Mar;15(3):455-60. doi: 10.1089/ten.tea.2008.0558. No abstract available.

PMID:
19215220
37.

Cell volume distributions reveal cell growth rates and division times.

Halter M, Elliott JT, Hubbard JB, Tona A, Plant AL.

J Theor Biol. 2009 Mar 7;257(1):124-30. doi: 10.1016/j.jtbi.2008.10.031. Epub 2008 Nov 14.

PMID:
19068221
38.

Cell response to matrix mechanics: focus on collagen.

Plant AL, Bhadriraju K, Spurlin TA, Elliott JT.

Biochim Biophys Acta. 2009 May;1793(5):893-902. doi: 10.1016/j.bbamcr.2008.10.012. Epub 2008 Nov 5. Review.

39.

Evaluating the performance of fibrillar collagen films formed at polystyrene surfaces as cell culture substrates.

Elliott JT, Halter M, Plant AL, Woodward JT, Langenbach KJ, Tona A.

Biointerphases. 2008 Jun;3(2):19. doi: 10.1116/1.2912936.

PMID:
20408686
40.
41.

Automated live cell imaging of green fluorescent protein degradation in individual fibroblasts.

Halter M, Tona A, Bhadriraju K, Plant AL, Elliott JT.

Cytometry A. 2007 Oct;71(10):827-34.

42.

The stiffness of collagen fibrils influences vascular smooth muscle cell phenotype.

McDaniel DP, Shaw GA, Elliott JT, Bhadriraju K, Meuse C, Chung KH, Plant AL.

Biophys J. 2007 Mar 1;92(5):1759-69. Epub 2006 Dec 8.

43.

Tools for quantitative and validated measurements of cells.

Plant AL, Elliott JT, Tona A, McDaniel D, Langenbach KJ.

Methods Mol Biol. 2007;356:95-107.

PMID:
16988397
44.

Thin films of Type 1 collagen for cell by cell analysis of morphology and tenascin-C promoter activity.

Langenbach KJ, Elliott JT, Tona A, McDaniel D, Plant AL.

BMC Biotechnol. 2006 Mar 6;6:14.

45.

Osteoblast cell membrane hybrid bilayers for studying cell-cell interactions.

Elliott JT, Tona A, Woodward JT, Meuse CW, Elgendy HM, Plant AL.

IEE Proc Nanobiotechnol. 2004 Jun;151(3):75-81.

PMID:
16475847
46.

Wound-induced terpene synthase gene expression in Sitka spruce that exhibit resistance or susceptibility to attack by the white pine weevil.

Byun-McKay A, Godard KA, Toudefallah M, Martin DM, Alfaro R, King J, Bohlmann J, Plant AL.

Plant Physiol. 2006 Mar;140(3):1009-21. Epub 2006 Jan 13.

47.

Vascular smooth muscle cell response on thin films of collagen.

Elliott JT, Woodward JT, Langenbach KJ, Tona A, Jones PL, Plant AL.

Matrix Biol. 2005 Oct;24(7):489-502. Epub 2005 Sep 8.

PMID:
16153814
49.

Stress-responsive alpha-dioxygenase expression in tomato roots.

Tirajoh A, Aung TS, McKay AB, Plant AL.

J Exp Bot. 2005 Feb;56(412):713-23. Epub 2004 Dec 23.

PMID:
15618300
50.

Insect attack and wounding induce traumatic resin duct development and gene expression of (-)-pinene synthase in Sitka spruce.

McKay SA, Hunter WL, Godard KA, Wang SX, Martin DM, Bohlmann J, Plant AL.

Plant Physiol. 2003 Sep;133(1):368-78.

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