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Items: 1 to 50 of 66

1.

Strains of Staphylococcus aureus that Colonize and Infect Skin Harbor Mutations in Metabolic Genes.

Acker KP, Wong Fok Lung T, West E, Craft J, Narechania A, Smith H, O'Brien K, Moustafa AM, Lauren C, Planet PJ, Prince A.

iScience. 2019 Jul 26;19:281-290. doi: 10.1016/j.isci.2019.07.037. [Epub ahead of print]

2.

Revisiting Bacterial Interference in the Age of Methicillin-resistant Staphylococcus aureus: Insights Into Staphylococcus aureus Carriage, Pathogenicity and Potential Control.

Planet PJ, Parker D, Ruff NL, Shinefield HR.

Pediatr Infect Dis J. 2019 Sep;38(9):958-966. doi: 10.1097/INF.0000000000002411.

PMID:
31274832
3.

Draft Genome Sequence of Multidrug-Resistant Enterococcus faecium Strain E1298, with a Sequence Type 1274 Profile, Recovered from the Cloacal Microbiome of a Tropical Screech Owl (Megascops choliba) in Rio de Janeiro, Brazil.

Freitas AAR, Souza SSR, Faria AR, Planet PJ, Merquior VLC, Teixeira LM.

Microbiol Resour Announc. 2019 Apr 18;8(16). pii: e00168-19. doi: 10.1128/MRA.00168-19.

4.

Local Diversification of Methicillin- Resistant Staphylococcus aureus ST239 in South America After Its Rapid Worldwide Dissemination.

Botelho AMN, Cerqueira E Costa MO, Moustafa AM, Beltrame CO, Ferreira FA, Côrtes MF, Costa BSS, Silva DNS, Bandeira PT, Lima NCB, Souza RC, de Almeida LGP, Vasconcelos ATR, Narechania A, Ryan C, O'Brien K, Kolokotronis SO, Planet PJ, Nicolás MF, Figueiredo AMS.

Front Microbiol. 2019 Feb 27;10:82. doi: 10.3389/fmicb.2019.00082. eCollection 2019.

5.

Sequential evolution of virulence and resistance during clonal spread of community-acquired methicillin-resistant Staphylococcus aureus.

Copin R, Sause WE, Fulmer Y, Balasubramanian D, Dyzenhaus S, Ahmed JM, Kumar K, Lees J, Stachel A, Fisher JC, Drlica K, Phillips M, Weiser JN, Planet PJ, Uhlemann AC, Altman DR, Sebra R, van Bakel H, Lighter J, Torres VJ, Shopsin B.

Proc Natl Acad Sci U S A. 2019 Jan 29;116(5):1745-1754. doi: 10.1073/pnas.1814265116. Epub 2019 Jan 11. Erratum in: Proc Natl Acad Sci U S A. 2019 Feb 25;:.

6.

Draft Genome Sequence of Enterococcus faecium CL-6729, a Clinical Isolate Showing Constitutive Vancomycin Resistance.

Monteiro da Silva BN, Faria AR, de Souza SDSR, Planet PJ, Merquior VLC, Teixeira LM.

Microbiol Resour Announc. 2018 Nov 21;7(20). pii: e00888-18. doi: 10.1128/MRA.00888-18. eCollection 2018 Nov.

7.

Mobile-Genetic-Element-Encoded Hypertolerance to Copper Protects Staphylococcus aureus from Killing by Host Phagocytes.

Zapotoczna M, Riboldi GP, Moustafa AM, Dickson E, Narechania A, Morrissey JA, Planet PJ, Holden MTG, Waldron KJ, Geoghegan JA.

MBio. 2018 Oct 16;9(5). pii: e00550-18. doi: 10.1128/mBio.00550-18.

8.

Phylogenomic Classification and the Evolution of Clonal Complex 5 Methicillin-Resistant Staphylococcus aureus in the Western Hemisphere.

Challagundla L, Reyes J, Rafiqullah I, Sordelli DO, Echaniz-Aviles G, Velazquez-Meza ME, Castillo-Ramírez S, Fittipaldi N, Feldgarden M, Chapman SB, Calderwood MS, Carvajal LP, Rincon S, Hanson B, Planet PJ, Arias CA, Diaz L, Robinson DA.

Front Microbiol. 2018 Aug 22;9:1901. doi: 10.3389/fmicb.2018.01901. eCollection 2018.

9.

Management of afebrile neonates with pustules and vesicles in a pediatric emergency department.

Manice CS, Planet PJ, Chase HS, Lauren CT.

Pediatr Dermatol. 2018 Sep;35(5):660-665. doi: 10.1111/pde.13538. Epub 2018 Jul 4.

PMID:
29974501
10.

Culture-Independent Analysis of Pediatric Bronchoalveolar Lavage Specimens.

Zachariah P, Ryan C, Nadimpalli S, Coscia G, Kolb M, Smith H, Foca M, Saiman L, Planet PJ.

Ann Am Thorac Soc. 2018 Sep;15(9):1047-1056. doi: 10.1513/AnnalsATS.201802-146OC.

PMID:
29877714
11.

A horizontally gene transferred copper resistance locus confers hyper-resistance to antibacterial copper toxicity and enables survival of community acquired methicillin resistant Staphylococcus aureus USA300 in macrophages.

Purves J, Thomas J, Riboldi GP, Zapotoczna M, Tarrant E, Andrew PW, Londoño A, Planet PJ, Geoghegan JA, Waldron KJ, Morrissey JA.

Environ Microbiol. 2018 Apr;20(4):1576-1589. doi: 10.1111/1462-2920.14088. Epub 2018 Mar 26.

12.

Erratum for Arias et al., "A Prospective Cohort Multicenter Study of Molecular Epidemiology and Phylogenomics of Staphylococcus aureus Bacteremia in Nine Latin American Countries".

Arias CA, Reyes J, Carvajal LP, Rincon S, Diaz L, Panesso D, Ibarra G, Rios R, Munita JM, Salles MJ, Alvarez-Moreno C, Labarca J, Garcia C, Luna CM, Mejia-Villatoro C, Zurita J, Guzman-Blanco M, Rodriguez-Noriega E, Narechania A, Rojas LJ, Planet PJ, Weinstock GM, Gotuzzo E, Seas C.

Antimicrob Agents Chemother. 2018 Feb 23;62(3). pii: e00095-18. doi: 10.1128/AAC.00095-18. Print 2018 Mar. No abstract available.

13.

Range Expansion and the Origin of USA300 North American Epidemic Methicillin-Resistant Staphylococcus aureus.

Challagundla L, Luo X, Tickler IA, Didelot X, Coleman DC, Shore AC, Coombs GW, Sordelli DO, Brown EL, Skov R, Larsen AR, Reyes J, Robledo IE, Vazquez GJ, Rivera R, Fey PD, Stevenson K, Wang SH, Kreiswirth BN, Mediavilla JR, Arias CA, Planet PJ, Nolan RL, Tenover FC, Goering RV, Robinson DA.

MBio. 2018 Jan 2;9(1). pii: e02016-17. doi: 10.1128/mBio.02016-17.

14.

Wound culture isolated antibiograms and caregiver-reported skin care practices in children with epidermolysis bullosa.

Singer HM, Levin LE, Garzon MC, Lauren CT, Planet PJ, Kittler NW, Whittier S, Morel KD.

Pediatr Dermatol. 2018 Jan;35(1):92-96. doi: 10.1111/pde.13331. Epub 2017 Nov 6.

PMID:
29105824
15.

An Analysis of the Epidemic of Klebsiella pneumoniae Carbapenemase-Producing K. pneumoniae: Convergence of Two Evolutionary Mechanisms Creates the "Perfect Storm".

Rojas LJ, Weinstock GM, De La Cadena E, Diaz L, Rios R, Hanson BM, Brown JS, Vats P, Phillips DS, Nguyen H, Hujer KM, Correa A, Adams MD, Perez F, Sodergren E, Narechania A, Planet PJ, Villegas MV, Bonomo RA, Arias CA.

J Infect Dis. 2017 Dec 27;217(1):82-92. doi: 10.1093/infdis/jix524.

16.

A Prospective Cohort Multicenter Study of Molecular Epidemiology and Phylogenomics of Staphylococcus aureus Bacteremia in Nine Latin American Countries.

Arias CA, Reyes J, Carvajal LP, Rincon S, Diaz L, Panesso D, Ibarra G, Rios R, Munita JM, Salles MJ, Alvarez-Moreno C, Labarca J, Garcia C, Luna CM, Mejia-Villatoro C, Zurita J, Guzman-Blanco M, Rodriguez-Noriega E, Narechania A, Rojas LJ, Planet PJ, Weinstock GM, Gotuzzo E, Seas C.

Antimicrob Agents Chemother. 2017 Sep 22;61(10). pii: e00816-17. doi: 10.1128/AAC.00816-17. Print 2017 Oct. Erratum in: Antimicrob Agents Chemother. 2018 Feb 23;62(3):.

17.

A Case Report of Pediatric Brucellosis in an Algerian Immigrant.

Kitt E, Brannock KR, VonHolz LA, Planet PJ, Graf E, Pillai V.

Open Forum Infect Dis. 2017 Feb 10;4(1):ofw263. doi: 10.1093/ofid/ofw263. eCollection 2017 Winter. Erratum in: Open Forum Infect Dis. 2017 Sep 14;4(3):ofx178.

18.

Life After USA300: The Rise and Fall of a Superbug.

Planet PJ.

J Infect Dis. 2017 Feb 15;215(suppl_1):S71-S77. doi: 10.1093/infdis/jiw444. Review.

19.

Genomic epidemiology of Lineage 4 Mycobacterium tuberculosis subpopulations in New York City and New Jersey, 1999-2009.

Brown TS, Narechania A, Walker JR, Planet PJ, Bifani PJ, Kolokotronis SO, Kreiswirth BN, Mathema B.

BMC Genomics. 2016 Nov 21;17(1):947.

20.

Global Spread of the Community-Associated Methicillin-Resistant Staphylococcus aureus USA300 Latin American Variant.

Planet PJ, Diaz L, Rios R, Arias CA.

J Infect Dis. 2016 Nov 15;214(10):1609-1610. Epub 2016 Sep 9. No abstract available.

21.

Clusterflock: a flocking algorithm for isolating congruent phylogenomic datasets.

Narechania A, Baker R, DeSalle R, Mathema B, Kolokotronis SO, Kreiswirth B, Planet PJ.

Gigascience. 2016 Oct 24;5(1):44.

22.

Architecture of a Species: Phylogenomics of Staphylococcus aureus.

Planet PJ, Narechania A, Chen L, Mathema B, Boundy S, Archer G, Kreiswirth B.

Trends Microbiol. 2017 Feb;25(2):153-166. doi: 10.1016/j.tim.2016.09.009. Epub 2016 Oct 14. Review.

PMID:
27751626
23.

Lambda Interferon Restructures the Nasal Microbiome and Increases Susceptibility to Staphylococcus aureus Superinfection.

Planet PJ, Parker D, Cohen TS, Smith H, Leon JD, Ryan C, Hammer TJ, Fierer N, Chen EI, Prince AS.

MBio. 2016 Feb 9;7(1):e01939-15. doi: 10.1128/mBio.01939-15.

24.

Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius.

Rosenfeld JA, Reeves D, Brugler MR, Narechania A, Simon S, Durrett R, Foox J, Shianna K, Schatz MC, Gandara J, Afshinnekoo E, Lam ET, Hastie AR, Chan S, Cao H, Saghbini M, Kentsis A, Planet PJ, Kholodovych V, Tessler M, Baker R, DeSalle R, Sorkin LN, Kolokotronis SO, Siddall ME, Amato G, Mason CE.

Nat Commun. 2016 Feb 2;7:10164. doi: 10.1038/ncomms10164.

25.

Erratum for Antonov et al., "Erratum for Antonov et al., High Prevalence of Pupirocin Resistance in Staphylococcus aureus Isolates from a Pediatric Population".

Antonov NK, Garzon MC, Morel KD, Whittier S, Planet PJ, Lauren CT.

Antimicrob Agents Chemother. 2015 Dec 31;60(1):715. doi: 10.1128/AAC.02903-15. Print 2016 Jan. No abstract available.

26.

Erratum for Antonov et al., high prevalence of pupirocin resistance in Staphylococcus aureus isolates from a pediatric population.

Antonov NK, Garzon MC, Morel KD, Whittier S, Planet PJ, Lauren CT.

Antimicrob Agents Chemother. 2015 Nov;59(11):7158. doi: 10.1128/AAC.02220-15. No abstract available. Erratum in: Antimicrob Agents Chemother. 2016 Jan;60(1):715.

27.

Methicillin-Susceptible, Vancomycin-Resistant Staphylococcus aureus, Brazil.

Panesso D, Planet PJ, Diaz L, Hugonnet JE, Tran TT, Narechania A, Munita JM, Rincon S, Carvajal LP, Reyes J, Londoño A, Smith H, Sebra R, Deikus G, Weinstock GM, Murray BE, Rossi F, Arthur M, Arias CA.

Emerg Infect Dis. 2015 Oct;21(10):1844-8. doi: 10.3201/eid2110.141914.

28.

Parallel Epidemics of Community-Associated Methicillin-Resistant Staphylococcus aureus USA300 Infection in North and South America.

Planet PJ, Diaz L, Kolokotronis SO, Narechania A, Reyes J, Xing G, Rincon S, Smith H, Panesso D, Ryan C, Smith DP, Guzman M, Zurita J, Sebra R, Deikus G, Nolan RL, Tenover FC, Weinstock GM, Robinson DA, Arias CA.

J Infect Dis. 2015 Dec 15;212(12):1874-82. doi: 10.1093/infdis/jiv320. Epub 2015 Jun 5.

29.

High prevalence of mupirocin resistance in Staphylococcus aureus isolates from a pediatric population.

Antonov NK, Garzon MC, Morel KD, Whittier S, Planet PJ, Lauren CT.

Antimicrob Agents Chemother. 2015;59(6):3350-6. doi: 10.1128/AAC.00079-15. Epub 2015 Mar 30. Erratum in: Antimicrob Agents Chemother. 2015 Nov;59(11):7158.

30.

Complete Genome Sequence of Streptococcus agalactiae CNCTC 10/84, a Hypervirulent Sequence Type 26 Strain.

Hooven TA, Randis TM, Daugherty SC, Narechania A, Planet PJ, Tettelin H, Ratner AJ.

Genome Announc. 2014 Dec 24;2(6). pii: e01338-14. doi: 10.1128/genomeA.01338-14.

31.

CD4+ T cells promote the pathogenesis of Staphylococcus aureus pneumonia.

Parker D, Ryan CL, Alonzo F 3rd, Torres VJ, Planet PJ, Prince AS.

J Infect Dis. 2015 Mar 1;211(5):835-45. doi: 10.1093/infdis/jiu525. Epub 2014 Sep 19.

32.

Evolution of hypervirulence by a MRSA clone through acquisition of a transposable element.

Benson MA, Ohneck EA, Ryan C, Alonzo F 3rd, Smith H, Narechania A, Kolokotronis SO, Satola SW, Uhlemann AC, Sebra R, Deikus G, Shopsin B, Planet PJ, Torres VJ.

Mol Microbiol. 2014 Aug;93(4):664-81. doi: 10.1111/mmi.12682. Epub 2014 Jul 16.

33.

Transferable vancomycin resistance in a community-associated MRSA lineage.

Rossi F, Diaz L, Wollam A, Panesso D, Zhou Y, Rincon S, Narechania A, Xing G, Di Gioia TS, Doi A, Tran TT, Reyes J, Munita JM, Carvajal LP, Hernandez-Roldan A, Brandão D, van der Heijden IM, Murray BE, Planet PJ, Weinstock GM, Arias CA.

N Engl J Med. 2014 Apr 17;370(16):1524-31. doi: 10.1056/NEJMoa1303359. Erratum in: N Engl J Med. 2014 Jun 5;370(23):2253.

34.

Secretion of IL-16 through TNFR1 and calpain-caspase signaling contributes to MRSA pneumonia.

Ahn DS, Parker D, Planet PJ, Nieto PA, Bueno SM, Prince A.

Mucosal Immunol. 2014 Nov;7(6):1366-74. doi: 10.1038/mi.2014.24. Epub 2014 Apr 16.

35.

Genome Sequence of Bacterial Interference Strain Staphylococcus aureus 502A.

Parker D, Narechania A, Sebra R, Deikus G, Larussa S, Ryan C, Smith H, Prince A, Mathema B, Ratner AJ, Kreiswirth B, Planet PJ.

Genome Announc. 2014 Apr 10;2(2). pii: e00284-14. doi: 10.1128/genomeA.00284-14.

36.

Induction of type I interferon signaling determines the relative pathogenicity of Staphylococcus aureus strains.

Parker D, Planet PJ, Soong G, Narechania A, Prince A.

PLoS Pathog. 2014 Feb 20;10(2):e1003951. doi: 10.1371/journal.ppat.1003951. eCollection 2014 Feb.

37.

Emergence of the epidemic methicillin-resistant Staphylococcus aureus strain USA300 coincides with horizontal transfer of the arginine catabolic mobile element and speG-mediated adaptations for survival on skin.

Planet PJ, LaRussa SJ, Dana A, Smith H, Xu A, Ryan C, Uhlemann AC, Boundy S, Goldberg J, Narechania A, Kulkarni R, Ratner AJ, Geoghegan JA, Kolokotronis SO, Prince A.

MBio. 2013 Dec 17;4(6):e00889-13. doi: 10.1128/mBio.00889-13.

38.

Bordetella holmesii: initial genomic analysis of an emerging opportunist.

Planet PJ, Narechania A, Hymes SR, Gagliardo C, Huard RC, Whittier S, Della-Latta P, Ratner AJ.

Pathog Dis. 2013 Mar;67(2):132-5. doi: 10.1111/2049-632X.12028. Epub 2013 Feb 26.

39.

Genome Sequence of the Human Abscess Isolate Streptococcus intermedius BA1.

Planet PJ, Rampersaud R, Hymes SR, Whittier S, Della-Latta PA, Narechania A, Daugherty SC, Santana-Cruz I, Desalle R, Ravel J, Ratner AJ.

Genome Announc. 2013 Jan;1(1). pii: e00117-12. doi: 10.1128/genomeA.00117-12. Epub 2013 Jan 31.

40.

Cigarette smoke increases Staphylococcus aureus biofilm formation via oxidative stress.

Kulkarni R, Antala S, Wang A, Amaral FE, Rampersaud R, Larussa SJ, Planet PJ, Ratner AJ.

Infect Immun. 2012 Nov;80(11):3804-11. doi: 10.1128/IAI.00689-12. Epub 2012 Aug 13.

41.

Genome sequence of Aggregatibacter actinomycetemcomitans RHAA1, isolated from a rhesus macaque, an Old World primate.

Karched M, Furgang D, Planet PJ, DeSalle R, Fine DH.

J Bacteriol. 2012 Mar;194(5):1275-6. doi: 10.1128/JB.06710-11.

42.

The product of tadZ, a new member of the parA/minD superfamily, localizes to a pole in Aggregatibacter actinomycetemcomitans.

Perez-Cheeks BA, Planet PJ, Sarkar IN, Clock SA, Xu Q, Figurski DH.

Mol Microbiol. 2012 Feb;83(4):694-711. doi: 10.1111/j.1365-2958.2011.07955.x. Epub 2012 Jan 13.

43.

Random Addition Concatenation Analysis: a novel approach to the exploration of phylogenomic signal reveals strong agreement between core and shell genomic partitions in the cyanobacteria.

Narechania A, Baker RH, Sit R, Kolokotronis SO, DeSalle R, Planet PJ.

Genome Biol Evol. 2012;4(1):30-43. doi: 10.1093/gbe/evr121. Epub 2011 Nov 16.

44.

Inerolysin, a cholesterol-dependent cytolysin produced by Lactobacillus iners.

Rampersaud R, Planet PJ, Randis TM, Kulkarni R, Aguilar JL, Lehrer RI, Ratner AJ.

J Bacteriol. 2011 Mar;193(5):1034-41. doi: 10.1128/JB.00694-10. Epub 2010 Dec 17.

45.

A whole-genome phylogeny of the family Pasteurellaceae.

Bonaventura MP, Lee EK, Desalle R, Planet PJ.

Mol Phylogenet Evol. 2010 Mar;54(3):950-6. doi: 10.1016/j.ympev.2009.08.010. Epub 2009 Aug 15.

PMID:
19686857
46.

The evolution of the major hepatitis C genotypes correlates with clinical response to interferon therapy.

Pang PS, Planet PJ, Glenn JS.

PLoS One. 2009 Aug 11;4(8):e6579. doi: 10.1371/journal.pone.0006579.

47.

Complete genome sequence of Aggregatibacter (Haemophilus) aphrophilus NJ8700.

Di Bonaventura MP, DeSalle R, Pop M, Nagarajan N, Figurski DH, Fine DH, Kaplan JB, Planet PJ.

J Bacteriol. 2009 Jul;191(14):4693-4. doi: 10.1128/JB.00447-09. Epub 2009 May 15.

48.

caos software for use in character-based DNA barcoding.

Sarkar IN, Planet PJ, Desalle R.

Mol Ecol Resour. 2008 Nov;8(6):1256-9. doi: 10.1111/j.1755-0998.2008.02235.x. Epub 2008 Aug 14.

PMID:
21586014
49.

Outer membrane components of the Tad (tight adherence) secreton of Aggregatibacter actinomycetemcomitans.

Clock SA, Planet PJ, Perez BA, Figurski DH.

J Bacteriol. 2008 Feb;190(3):980-90. Epub 2007 Nov 30.

50.

The tad locus: postcards from the widespread colonization island.

Tomich M, Planet PJ, Figurski DH.

Nat Rev Microbiol. 2007 May;5(5):363-75. Review.

PMID:
17435791

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