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Use of Foaming Disinfectants and Cleaners to Reduce Aerobic Bacteria and Salmonella on Poultry Transport Coops.

Hinojosa C, Caldwell D, Byrd J, Droleskey R, Lee J, Stayer P, Resendiz E, Garcia J, Klein S, Caldwell D, Pineda M, Farnell M.

Animals (Basel). 2018 Nov 2;8(11). pii: E195. doi: 10.3390/ani8110195.


Safe CRISPR: Challenges and Possible Solutions.

Pineda M, Lear A, Collins JP, Kiani S.

Trends Biotechnol. 2018 Oct 20. pii: S0167-7799(18)30263-4. doi: 10.1016/j.tibtech.2018.09.010. [Epub ahead of print] Review.


A small molecule inhibitor of the perinucleolar compartment, ML246, attenuates growth and spread of ovarian cancer.

Kanis MJ, Qiang W, Pineda M, Maniar KP, Kim JJ.

Gynecol Oncol Res Pract. 2018 Oct 2;5:7. doi: 10.1186/s40661-018-0064-2. eCollection 2018.


Primary constitutional MLH1 epimutations: a focal epigenetic event.

Dámaso E, Castillejo A, Arias MDM, Canet-Hermida J, Navarro M, Del Valle J, Campos O, Fernández A, Marín F, Turchetti D, García-Díaz JD, Lázaro C, Genuardi M, Rueda D, Alonso Á, Soto JL, Hitchins M, Pineda M, Capellá G.

Br J Cancer. 2018 Oct;119(8):978-987. doi: 10.1038/s41416-018-0019-8. Epub 2018 Oct 4.


Immediate Complications of Elective Newborn Circumcision.

Heras A, Vallejo V, Pineda MI, Jacobs AJ, Cohen L.

Hosp Pediatr. 2018 Oct;8(10):615-619. doi: 10.1542/hpeds.2018-0005.


Computational Tools for Splicing Defect Prediction in Breast/Ovarian Cancer Genes: How Efficient Are They at Predicting RNA Alterations?

Moles-Fernández A, Duran-Lozano L, Montalban G, Bonache S, López-Perolio I, Menéndez M, Santamariña M, Behar R, Blanco A, Carrasco E, López-Fernández A, Stjepanovic N, Balmaña J, Capellá G, Pineda M, Vega A, Lázaro C, de la Hoya M, Diez O, Gutiérrez-Enríquez S.

Front Genet. 2018 Sep 5;9:366. doi: 10.3389/fgene.2018.00366. eCollection 2018.


Cancer Risks for PMS2-Associated Lynch Syndrome.

Ten Broeke SW, van der Klift HM, Tops CMJ, Aretz S, Bernstein I, Buchanan DD, de la Chapelle A, Capella G, Clendenning M, Engel C, Gallinger S, Gomez Garcia E, Figueiredo JC, Haile R, Hampel HL, Hopper JL, Hoogerbrugge N, von Knebel Doeberitz M, Le Marchand L, Letteboer TGW, Jenkins MA, Lindblom A, Lindor NM, Mensenkamp AR, Møller P, Newcomb PA, van Os TAM, Pearlman R, Pineda M, Rahner N, Redeker EJW, Olderode-Berends MJW, Rosty C, Schackert HK, Scott R, Senter L, Spruijt L, Steinke-Lange V, Suerink M, Thibodeau S, Vos YJ, Wagner A, Winship I, Hes FJ, Vasen HFA, Wijnen JT, Nielsen M, Win AK.

J Clin Oncol. 2018 Oct 10;36(29):2961-2968. doi: 10.1200/JCO.2018.78.4777. Epub 2018 Aug 30.


Interaction between the microbiome and TP53 in human lung cancer.

Greathouse KL, White JR, Vargas AJ, Bliskovsky VV, Beck JA, von Muhlinen N, Polley EC, Bowman ED, Khan MA, Robles AI, Cooks T, Ryan BM, Padgett N, Dzutsev AH, Trinchieri G, Pineda MA, Bilke S, Meltzer PS, Hokenstad AN, Stickrod TM, Walther-Antonio MR, Earl JP, Mell JC, Krol JE, Balashov SV, Bhat AS, Ehrlich GD, Valm A, Deming C, Conlan S, Oh J, Segre JA, Harris CC.

Genome Biol. 2018 Aug 24;19(1):123. doi: 10.1186/s13059-018-1501-6.


Miglustat in Niemann-Pick disease type C patients: a review.

Pineda M, Walterfang M, Patterson MC.

Orphanet J Rare Dis. 2018 Aug 15;13(1):140. doi: 10.1186/s13023-018-0844-0. Review.


Safety and dose modification for patients receiving niraparib.

Berek JS, Matulonis UA, Peen U, Ghatage P, Mahner S, Redondo A, Lesoin A, Colombo N, Vergote I, Rosengarten O, Ledermann J, Pineda M, Ellard S, Sehouli J, Gonzalez-Martin A, Berton-Rigaud D, Madry R, Reinthaller A, Hazard S, Guo W, Mirza MR.

Ann Oncol. 2018 Aug 13. doi: 10.1093/annonc/mdy255. [Epub ahead of print] No abstract available.


High-Resolution Pulse Oximetry (HRPO): A Cost-Effective Tool in Screening for Obstructive Sleep Apnea (OSA) in Acute Stroke and Predicting Outcome.

Yaddanapudi SS, Pineda MC, Boorman DW, Bryne RE, Hing KL, Sharma S.

J Stroke Cerebrovasc Dis. 2018 Nov;27(11):2986-2992. doi: 10.1016/j.jstrokecerebrovasdis.2018.06.030. Epub 2018 Aug 7.


Haematopoietic stem cell transplantation for mucopolysaccharidosis type VII: A case report.

Sisinni L, Pineda M, Coll MJ, Gort L, Turon E, Torrent M, Ey A, Tobajas E, Badell I.

Pediatr Transplant. 2018 Nov;22(7):e13278. doi: 10.1111/petr.13278. Epub 2018 Aug 9.


Apigenin C-glycosides of Microcos paniculata protects lipopolysaccharide induced apoptosis and inflammation in acute lung injury through TLR4 signaling pathway.

Li K, He Z, Wang X, Pineda M, Chen R, Liu H, Ma K, Shen H, Wu C, Huang N, Pan T, Liu Y, Guo J.

Free Radic Biol Med. 2018 Aug 20;124:163-175. doi: 10.1016/j.freeradbiomed.2018.06.009. Epub 2018 Jun 8.


Protection Against Arthritis by the Parasitic Worm Product ES-62, and Its Drug-Like Small Molecule Analogues, Is Associated With Inhibition of Osteoclastogenesis.

Doonan J, Lumb FE, Pineda MA, Tarafdar A, Crowe J, Khan AM, Suckling CJ, Harnett MM, Harnett W.

Front Immunol. 2018 May 14;9:1016. doi: 10.3389/fimmu.2018.01016. eCollection 2018.


Safety and dose modification for patients receiving niraparib.

Berek JS, Matulonis UA, Peen U, Ghatage P, Mahner S, Redondo A, Lesoin A, Colombo N, Vergote I, Rosengarten O, Ledermann J, Pineda M, Ellard S, Sehouli J, Gonzalez-Martin A, Berton-Rigaud D, Madry R, Reinthaller A, Hazard S, Guo W, Mirza MR.

Ann Oncol. 2018 Aug 1;29(8):1784-1792. doi: 10.1093/annonc/mdy181.


Comprehension of Top 200 Prescribed Drugs in the US as a Resource for Pharmacy Teaching, Training and Practice.

Fuentes AV, Pineda MD, Venkata KCN.

Pharmacy (Basel). 2018 May 14;6(2). pii: E43. doi: 10.3390/pharmacy6020043.


Characterization of BK Polyomaviruses from Kidney Transplant Recipients Suggests a Role for APOBEC3 in Driving In-Host Virus Evolution.

Peretti A, Geoghegan EM, Pastrana DV, Smola S, Feld P, Sauter M, Lohse S, Ramesh M, Lim ES, Wang D, Borgogna C, FitzGerald PC, Bliskovsky V, Starrett GJ, Law EK, Harris RS, Killian JK, Zhu J, Pineda M, Meltzer PS, Boldorini R, Gariglio M, Buck CB.

Cell Host Microbe. 2018 May 9;23(5):628-635.e7. doi: 10.1016/j.chom.2018.04.005.


EGFRvIII-Stat5 Signaling Enhances Glioblastoma Cell Migration and Survival.

Roos A, Dhruv HD, Peng S, Inge LJ, Tuncali S, Pineda M, Millard N, Mayo Z, Eschbacher JM, Loftus JC, Winkles JA, Tran NL.

Mol Cancer Res. 2018 Jul;16(7):1185-1195. doi: 10.1158/1541-7786.MCR-18-0125. Epub 2018 May 3.


The origin of aliphatic hydrocarbons in olive oil.

Pineda M, Rojas M, Gálvez-Valdivieso G, Aguilar M.

J Sci Food Agric. 2018 Apr;98(6):2440-2441. doi: 10.1002/jsfa.8912. No abstract available.


Detection of Bacterial Infection in Melon Plants by Classification Methods Based on Imaging Data.

Pineda M, Pérez-Bueno ML, Barón M.

Front Plant Sci. 2018 Feb 14;9:164. doi: 10.3389/fpls.2018.00164. eCollection 2018.


Predicting soil water content at - 33 kPa by pedotransfer functions in stoniness 1 soils in northeast Venezuela.

Pineda MC, Viloria J, Martínez-Casasnovas JA, Valera A, Lobo D, Timm LC, Pires LF, Gabriels D.

Environ Monit Assess. 2018 Feb 22;190(3):161. doi: 10.1007/s10661-018-6528-3.


Germline mutations in the spindle assembly checkpoint genes BUB1 and BUB3 are infrequent in familial colorectal cancer and polyposis.

Mur P, De Voer RM, Olivera-Salguero R, Rodríguez-Perales S, Pons T, Setién F, Aiza G, Valdés-Mas R, Bertini A, Pineda M, Vreede L, Navarro M, Iglesias S, González S, Brunet J, Valencia A, Esteller M, Lázaro C, Kops GJPL, Urioste M, Puente XS, Capellá G, Valle L.

Mol Cancer. 2018 Feb 15;17(1):23. doi: 10.1186/s12943-018-0762-8.


Progenitor B-1 B-cell acute lymphoblastic leukemia is associated with collaborative mutations in 3 critical pathways.

Gough SM, Goldberg L, Pineda M, Walker RL, Zhu YJ, Bilke S, Chung YJ, Dufraine J, Kundu S, Jacoby E, Fry TJ, Fischer S, Panzer-Grümayer R, Meltzer PS, Aplan PD.

Blood Adv. 2017 Sep 8;1(20):1749-1759. doi: 10.1182/bloodadvances.2017009837. eCollection 2017 Sep 12.


CDKL5 variants: Improving our understanding of a rare neurologic disorder.

Hector RD, Kalscheuer VM, Hennig F, Leonard H, Downs J, Clarke A, Benke TA, Armstrong J, Pineda M, Bailey MES, Cobb SR.

Neurol Genet. 2017 Dec 15;3(6):e200. doi: 10.1212/NXG.0000000000000200. eCollection 2017 Dec.


Impact of Suspended Solids on the Use of LuminoTox to Detect Toxicity of Micropollutants.

Marshall M, Pineda M, Yargeau V.

Arch Environ Contam Toxicol. 2018 May;74(4):633-644. doi: 10.1007/s00244-017-0478-6. Epub 2017 Nov 22.


Sediment tolerance mechanisms identified in sponges using advanced imaging techniques.

Strehlow BW, Pineda MC, Duckworth A, Kendrick GA, Renton M, Abdul Wahab MA, Webster NS, Clode PL.

PeerJ. 2017 Nov 16;5:e3904. doi: 10.7717/peerj.3904. eCollection 2017.


Colorectal cancer incidence in path_MLH1 carriers subjected to different follow-up protocols: a Prospective Lynch Syndrome Database report.

Seppälä T, Pylvänäinen K, Evans DG, Järvinen H, Renkonen-Sinisalo L, Bernstein I, Holinski-Feder E, Sala P, Lindblom A, Macrae F, Blanco I, Sijmons R, Jeffries J, Vasen H, Burn J, Nakken S, Hovig E, Rødland EA, Tharmaratnam K, de Vos Tot Nederveen Cappel WH, Hill J, Wijnen J, Jenkins M, Genuardi M, Green K, Lalloo F, Sunde L, Mints M, Bertario L, Pineda M, Navarro M, Morak M, Frayling IM, Plazzer JP, Sampson JR, Capella G, Möslein G, Mecklin JP, Møller P; Mallorca Group.

Hered Cancer Clin Pract. 2017 Oct 10;15:18. doi: 10.1186/s13053-017-0078-5. eCollection 2017.


The sponge microbiome project.

Moitinho-Silva L, Nielsen S, Amir A, Gonzalez A, Ackermann GL, Cerrano C, Astudillo-Garcia C, Easson C, Sipkema D, Liu F, Steinert G, Kotoulas G, McCormack GP, Feng G, Bell JJ, Vicente J, Björk JR, Montoya JM, Olson JB, Reveillaud J, Steindler L, Pineda MC, Marra MV, Ilan M, Taylor MW, Polymenakou P, Erwin PM, Schupp PJ, Simister RL, Knight R, Thacker RW, Costa R, Hill RT, Lopez-Legentil S, Dailianis T, Ravasi T, Hentschel U, Li Z, Webster NS, Thomas T.

Gigascience. 2017 Oct 1;6(10):1-7. doi: 10.1093/gigascience/gix077.


Folate deficiency in patients seeking treatment of alcohol use disorder.

Sanvisens A, Zuluaga P, Pineda M, Fuster D, Bolao F, Juncà J, Tor J, Muga R.

Drug Alcohol Depend. 2017 Nov 1;180:417-422. doi: 10.1016/j.drugalcdep.2017.08.039. Epub 2017 Sep 27.


The utility of Next Generation Sequencing for molecular diagnostics in Rett syndrome.

Vidal S, Brandi N, Pacheco P, Gerotina E, Blasco L, Trotta JR, Derdak S, Del Mar O'Callaghan M, Garcia-Cazorla À, Pineda M, Armstrong J; Rett Working Group.

Sci Rep. 2017 Sep 25;7(1):12288. doi: 10.1038/s41598-017-11620-3.


Psychiatric and neurological symptoms in patients with Niemann-Pick disease type C (NP-C): Findings from the International NPC Registry.

Bonnot O, Gama CS, Mengel E, Pineda M, Vanier MT, Watson L, Watissée M, Schwierin B, Patterson MC.

World J Biol Psychiatry. 2017 Oct 9:1-10. doi: 10.1080/15622975.2017.1379610. [Epub ahead of print]


Association Between Germline Mutations in BRF1, a Subunit of the RNA Polymerase III Transcription Complex, and Hereditary Colorectal Cancer.

Bellido F, Sowada N, Mur P, Lázaro C, Pons T, Valdés-Mas R, Pineda M, Aiza G, Iglesias S, Soto JL, Urioste M, Caldés T, Balbín M, Blay P, Rueda D, Durán M, Valencia A, Moreno V, Brunet J, Blanco I, Navarro M, Calin GA, Borck G, Puente XS, Capellá G, Valle L.

Gastroenterology. 2018 Jan;154(1):181-194.e20. doi: 10.1053/j.gastro.2017.09.005. Epub 2017 Sep 12.


Modelling the collective response of heterogeneous cell populations to stationary gradients and chemical signal relay.

Pineda M, Eftimie R.

Phys Biol. 2017 Nov 16;14(6):066003. doi: 10.1088/1478-3975/aa89b4.


FDA Approval of PARP Inhibitors and the Impact on Genetic Counseling and Genetic Testing Practices.

Buchtel KM, Vogel Postula KJ, Weiss S, Williams C, Pineda M, Weissman SM.

J Genet Couns. 2018 Feb;27(1):131-139. doi: 10.1007/s10897-017-0130-7. Epub 2017 Aug 5.


Large-scale differences in microbial biodiversity discovery between 16S amplicon and shotgun sequencing.

Tessler M, Neumann JS, Afshinnekoo E, Pineda M, Hersch R, Velho LFM, Segovia BT, Lansac-Toha FA, Lemke M, DeSalle R, Mason CE, Brugler MR.

Sci Rep. 2017 Jul 31;7(1):6589. doi: 10.1038/s41598-017-06665-3.


Cancer risk and survival in path_MMR carriers by gene and gender up to 75 years of age: a report from the Prospective Lynch Syndrome Database.

Møller P, Seppälä TT, Bernstein I, Holinski-Feder E, Sala P, Gareth Evans D, Lindblom A, Macrae F, Blanco I, Sijmons RH, Jeffries J, Vasen HFA, Burn J, Nakken S, Hovig E, Rødland EA, Tharmaratnam K, de Vos Tot Nederveen Cappel WH, Hill J, Wijnen JT, Jenkins MA, Green K, Lalloo F, Sunde L, Mints M, Bertario L, Pineda M, Navarro M, Morak M, Renkonen-Sinisalo L, Valentin MD, Frayling IM, Plazzer JP, Pylvanainen K, Genuardi M, Mecklin JP, Moeslein G, Sampson JR, Capella G; Mallorca Group.

Gut. 2018 Jul;67(7):1306-1316. doi: 10.1136/gutjnl-2017-314057. Epub 2017 Jul 28.


Screening tests for distal symmetrical polyneuropathy in Latin American patients with type 2 diabetes mellitus.

Gómez-Banoy N, Cuevas V, Soler F, Pineda MF, Mockus I.

Arch Endocrinol Metab. 2017 Sept-Oct;61(5):470-475. doi: 10.1590/2359-3997000000283. Epub 2017 Jul 13.


Beyond mean-field approximations for accurate and computationally efficient models of on-lattice chemical kinetics.

Pineda M, Stamatakis M.

J Chem Phys. 2017 Jul 14;147(2):024105. doi: 10.1063/1.4991690.


Effects of sediment smothering on the sponge holobiont with implications for dredging management.

Pineda MC, Strehlow B, Sternel M, Duckworth A, Haan JD, Jones R, Webster NS.

Sci Rep. 2017 Jul 14;7(1):5156. doi: 10.1038/s41598-017-05243-x.


Effects of combined dredging-related stressors on sponges: a laboratory approach using realistic scenarios.

Pineda MC, Strehlow B, Kamp J, Duckworth A, Jones R, Webster NS.

Sci Rep. 2017 Jul 12;7(1):5155. doi: 10.1038/s41598-017-05251-x.


Effects of suspended sediments on the sponge holobiont with implications for dredging management.

Pineda MC, Strehlow B, Sternel M, Duckworth A, Jones R, Webster NS.

Sci Rep. 2017 Jul 10;7(1):4925. doi: 10.1038/s41598-017-05241-z.


Mutational Heterogeneity in APC and KRAS Arises at the Crypt Level and Leads to Polyclonality in Early Colorectal Tumorigenesis.

Gausachs M, Borras E, Chang K, Gonzalez S, Azuara D, Delgado Amador A, Lopez-Doriga A, San Lucas FA, Sanjuan X, Paules MJ, Taggart MW, Davies GE, Ehli EA, Fowler J, Moreno V, Pineda M, You YN, Lynch PM, Lazaro C, Navin NE, Scheet PA, Hawk ET, Capella G, Vilar E.

Clin Cancer Res. 2017 Oct 1;23(19):5936-5947. doi: 10.1158/1078-0432.CCR-17-0821. Epub 2017 Jun 23.


Elucidating the molecular basis of MSH2-deficient tumors by combined germline and somatic analysis.

Vargas-Parra GM, González-Acosta M, Thompson BA, Gómez C, Fernández A, Dámaso E, Pons T, Morak M, Del Valle J, Iglesias S, Velasco À, Solanes A, Sanjuan X, Padilla N, de la Cruz X, Valencia A, Holinski-Feder E, Brunet J, Feliubadaló L, Lázaro C, Navarro M, Pineda M, Capellá G.

Int J Cancer. 2017 Oct 1;141(7):1365-1380. doi: 10.1002/ijc.30820. Epub 2017 Jul 3.


Engineered CRISPR Systems for Next Generation Gene Therapies.

Pineda M, Moghadam F, Ebrahimkhani MR, Kiani S.

ACS Synth Biol. 2017 Sep 15;6(9):1614-1626. doi: 10.1021/acssynbio.7b00011. Epub 2017 Jun 7. Review.


Microbiome analysis of a disease affecting the deep-sea sponge Geodia barretti.

Luter HM, Bannister RJ, Whalan S, Kutti T, Pineda MC, Webster NS.

FEMS Microbiol Ecol. 2017 Jun 1;93(6). doi: 10.1093/femsec/fix074.


Response and Rebuttal to Editorial Comment on "Distinguishing Failure to Cure From Complication After Penile Prosthesis Implantation".

Pineda M, Burnett AL.

J Sex Med. 2017 May;14(5):740. doi: 10.1016/j.jsxm.2017.03.245. No abstract available.


Dendritic cells provide a therapeutic target for synthetic small molecule analogues of the parasitic worm product, ES-62.

Lumb FE, Doonan J, Bell KS, Pineda MA, Corbet M, Suckling CJ, Harnett MM, Harnett W.

Sci Rep. 2017 May 10;7(1):1704. doi: 10.1038/s41598-017-01651-1.


Sensitivity of the LuminoTox tool to monitor contaminants of emerging concern in municipal secondary wastewater effluent.

Marshall M, Pineda M, Yargeau V.

Sci Total Environ. 2017 Nov 15;598:1065-1075. doi: 10.1016/j.scitotenv.2017.04.118. Epub 2017 May 2.


Placenta Previa Increta in an Unscarred Uterus With Marked Thinning of Myometrium in the Entire Uterus in a Patient With Systemic Lupus Erythematosus.

Mittal N, Pineda M, Lim B, Carey E.

Int J Gynecol Pathol. 2018 Mar;37(2):198-203. doi: 10.1097/PGP.0000000000000397.


Clinical and sociodemographic profile of epilepsy in adults from a reference centre in Colombia.

Orozco-Hernández JP, Quintero-Moreno JF, Marín-Medina DS, Castaño-Montoya JP, Hernández-Coral P, Pineda M, Vélez JD, Villada HC, Martínez JW, Lizcano A.

Neurologia. 2017 Apr 27. pii: S0213-4853(17)30151-2. doi: 10.1016/j.nrl.2017.02.013. [Epub ahead of print] English, Spanish.

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