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Items: 17

1.

Conversion of stranded waste-stream carbon and nutrients into value-added products via metabolically coupled binary heterotroph-photoautotroph system.

Bohutskyi P, Kucek LA, Hill E, Pinchuk GE, Mundree SG, Beliaev AS.

Bioresour Technol. 2018 Jul;260:68-75. doi: 10.1016/j.biortech.2018.02.080. Epub 2018 Feb 19.

PMID:
29614453
2.

Inference of interactions in cyanobacterial-heterotrophic co-cultures via transcriptome sequencing.

Beliaev AS, Romine MF, Serres M, Bernstein HC, Linggi BE, Markillie LM, Isern NG, Chrisler WB, Kucek LA, Hill EA, Pinchuk GE, Bryant DA, Wiley HS, Fredrickson JK, Konopka A.

ISME J. 2014 Nov;8(11):2243-55. doi: 10.1038/ismej.2014.69. Epub 2014 Apr 29.

3.

Feedback-controlled LED photobioreactor for photophysiological studies of cyanobacteria.

Melnicki MR, Pinchuk GE, Hill EA, Kucek LA, Stolyar SM, Fredrickson JK, Konopka AE, Beliaev AS.

Bioresour Technol. 2013 Apr;134:127-33. doi: 10.1016/j.biortech.2013.01.079. Epub 2013 Feb 10.

PMID:
23500569
4.

Spatially resolved analysis of glycolipids and metabolites in living Synechococcus sp. PCC 7002 using nanospray desorption electrospray ionization.

Lanekoff I, Geydebrekht O, Pinchuk GE, Konopka AE, Laskin J.

Analyst. 2013 Apr 7;138(7):1971-8. doi: 10.1039/c3an36716a. Epub 2013 Feb 7.

PMID:
23392077
5.

Dynamic modeling of aerobic growth of Shewanella oneidensis. Predicting triauxic growth, flux distributions, and energy requirement for growth.

Song HS, Ramkrishna D, Pinchuk GE, Beliaev AS, Konopka AE, Fredrickson JK.

Metab Eng. 2013 Jan;15:25-33. doi: 10.1016/j.ymben.2012.08.004. Epub 2012 Sep 26.

PMID:
23022551
6.

Sustained H(2) production driven by photosynthetic water splitting in a unicellular cyanobacterium.

Melnicki MR, Pinchuk GE, Hill EA, Kucek LA, Fredrickson JK, Konopka A, Beliaev AS.

MBio. 2012 Aug 7;3(4):e00197-12. doi: 10.1128/mBio.00197-12. Print 2012.

7.

Genome-scale modeling of light-driven reductant partitioning and carbon fluxes in diazotrophic unicellular cyanobacterium Cyanothece sp. ATCC 51142.

Vu TT, Stolyar SM, Pinchuk GE, Hill EA, Kucek LA, Brown RN, Lipton MS, Osterman A, Fredrickson JK, Konopka AE, Beliaev AS, Reed JL.

PLoS Comput Biol. 2012;8(4):e1002460. doi: 10.1371/journal.pcbi.1002460. Epub 2012 Apr 5.

8.

Pyruvate and lactate metabolism by Shewanella oneidensis MR-1 under fermentation, oxygen limitation, and fumarate respiration conditions.

Pinchuk GE, Geydebrekht OV, Hill EA, Reed JL, Konopka AE, Beliaev AS, Fredrickson JK.

Appl Environ Microbiol. 2011 Dec;77(23):8234-40. doi: 10.1128/AEM.05382-11. Epub 2011 Sep 30.

9.

Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation.

Pinchuk GE, Hill EA, Geydebrekht OV, De Ingeniis J, Zhang X, Osterman A, Scott JH, Reed SB, Romine MF, Konopka AE, Beliaev AS, Fredrickson JK, Reed JL.

PLoS Comput Biol. 2010 Jun 24;6(6):e1000822. doi: 10.1371/journal.pcbi.1000822.

10.

Involvement of a membrane-bound class III adenylate cyclase in regulation of anaerobic respiration in Shewanella oneidensis MR-1.

Charania MA, Brockman KL, Zhang Y, Banerjee A, Pinchuk GE, Fredrickson JK, Beliaev AS, Saffarini DA.

J Bacteriol. 2009 Jul;191(13):4298-306. doi: 10.1128/JB.01829-08. Epub 2009 Apr 24.

11.

Antibody recognition force microscopy shows that outer membrane cytochromes OmcA and MtrC are expressed on the exterior surface of Shewanella oneidensis MR-1.

Lower BH, Yongsunthon R, Shi L, Wildling L, Gruber HJ, Wigginton NS, Reardon CL, Pinchuk GE, Droubay TC, Boily JF, Lower SK.

Appl Environ Microbiol. 2009 May;75(9):2931-5. doi: 10.1128/AEM.02108-08. Epub 2009 Mar 13.

12.

Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization.

Pinchuk GE, Rodionov DA, Yang C, Li X, Osterman AL, Dervyn E, Geydebrekht OV, Reed SB, Romine MF, Collart FR, Scott JH, Fredrickson JK, Beliaev AS.

Proc Natl Acad Sci U S A. 2009 Feb 24;106(8):2874-9. doi: 10.1073/pnas.0806798106. Epub 2009 Feb 5.

13.

Oxygen-dependent autoaggregation in Shewanella oneidensis MR-1.

McLean JS, Pinchuk GE, Geydebrekht OV, Bilskis CL, Zakrajsek BA, Hill EA, Saffarini DA, Romine MF, Gorby YA, Fredrickson JK, Beliaev AS.

Environ Microbiol. 2008 Jul;10(7):1861-76. doi: 10.1111/j.1462-2920.2008.01608.x. Epub 2008 Apr 10.

PMID:
18412550
14.

Utilization of DNA as a sole source of phosphorus, carbon, and energy by Shewanella spp.: ecological and physiological implications for dissimilatory metal reduction.

Pinchuk GE, Ammons C, Culley DE, Li SM, McLean JS, Romine MF, Nealson KH, Fredrickson JK, Beliaev AS.

Appl Environ Microbiol. 2008 Feb;74(4):1198-208. Epub 2007 Dec 21.

15.

The influence of cultivation methods on Shewanella oneidensis physiology and proteome expression.

Elias DA, Tollaksen SL, Kennedy DW, Mottaz HM, Giometti CS, McLean JS, Hill EA, Pinchuk GE, Lipton MS, Fredrickson JK, Gorby YA.

Arch Microbiol. 2008 Apr;189(4):313-24. Epub 2007 Nov 21.

16.

NMR methods for in situ biofilm metabolism studies.

Majors PD, McLean JS, Pinchuk GE, Fredrickson JK, Gorby YA, Minard KR, Wind RA.

J Microbiol Methods. 2005 Sep;62(3):337-44.

PMID:
15936835
17.

[Overproduction of riboflavin in mutants of Pichia guilliermondii yeasts resistant to 7-methyl-8-trifluoromethyl-10-(1'-D-ribityl)isoalloxazine].

ShavlovskiÄ­ GM, SibirnyÄ­ AA, Ksheminskaia GP, Pinchuk GE.

Mikrobiologiia. 1980 Sep-Oct;49(5):702-7. Russian.

PMID:
7442566

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