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Genetic Analysis and Transfer of Favorable Exotic QTL Alleles for Grain Yield Across D Genome Using Two Advanced Backcross Wheat Populations.

Naz AA, Dadshani S, Ballvora A, Pillen K, Léon J.

Front Plant Sci. 2019 Jun 4;10:711. doi: 10.3389/fpls.2019.00711. eCollection 2019.


Genetic dissection of grain elements predicted by hyperspectral imaging associated with yield-related traits in a wild barley NAM population.

Herzig P, Backhaus A, Seiffert U, von Wirén N, Pillen K, Maurer A.

Plant Sci. 2019 Aug;285:151-164. doi: 10.1016/j.plantsci.2019.05.008. Epub 2019 May 15.


"Wild barley serves as a source for biofortification of barley grains".

Wiegmann M, Thomas WTB, Bull HJ, Flavell AJ, Zeyner A, Peiter E, Pillen K, Maurer A.

Plant Sci. 2019 Jun;283:83-94. doi: 10.1016/j.plantsci.2018.12.030. Epub 2019 Feb 26.


Barley yield formation under abiotic stress depends on the interplay between flowering time genes and environmental cues.

Wiegmann M, Maurer A, Pham A, March TJ, Al-Abdallat A, Thomas WTB, Bull HJ, Shahid M, Eglinton J, Baum M, Flavell AJ, Tester M, Pillen K.

Sci Rep. 2019 Apr 25;9(1):6397. doi: 10.1038/s41598-019-42673-1.


Genome-wide association of barley plant growth under drought stress using a nested association mapping population.

Pham AT, Maurer A, Pillen K, Brien C, Dowling K, Berger B, Eglinton JK, March TJ.

BMC Plant Biol. 2019 Apr 11;19(1):134. doi: 10.1186/s12870-019-1723-0.


Whole-Genome Association Mapping and Genomic Prediction for Iron Concentration in Wheat Grains.

Alomari DZ, Eggert K, von Wirén N, Polley A, Plieske J, Ganal MW, Liu F, Pillen K, Röder MS.

Int J Mol Sci. 2018 Dec 25;20(1). pii: E76. doi: 10.3390/ijms20010076.


Identifying Candidate Genes for Enhancing Grain Zn Concentration in Wheat.

Alomari DZ, Eggert K, von Wirén N, Alqudah AM, Polley A, Plieske J, Ganal MW, Pillen K, Röder MS.

Front Plant Sci. 2018 Sep 10;9:1313. doi: 10.3389/fpls.2018.01313. eCollection 2018.


An Ancestral Allele of Pyrroline-5-carboxylate synthase1 Promotes Proline Accumulation and Drought Adaptation in Cultivated Barley.

Muzammil S, Shrestha A, Dadshani S, Pillen K, Siddique S, Léon J, Naz AA.

Plant Physiol. 2018 Oct;178(2):771-782. doi: 10.1104/pp.18.00169. Epub 2018 Aug 21.


Adaptive selection of founder segments and epistatic control of plant height in the MAGIC winter wheat population WM-800.

Sannemann W, Lisker A, Maurer A, Léon J, Kazman E, Cöster H, Holzapfel J, Kempf H, Korzun V, Ebmeyer E, Pillen K.

BMC Genomics. 2018 Jul 31;19(1):559. doi: 10.1186/s12864-018-4915-3.


Association genetics studies on frost tolerance in wheat (Triticum aestivum L.) reveal new highly conserved amino acid substitutions in CBF-A3, CBF-A15, VRN3 and PPD1 genes.

Babben S, Schliephake E, Janitza P, Berner T, Keilwagen J, Koch M, Arana-Ceballos FA, Templer SE, Chesnokov Y, Pshenichnikova T, Schondelmaier J, Börner A, Pillen K, Ordon F, Perovic D.

BMC Genomics. 2018 May 29;19(1):409. doi: 10.1186/s12864-018-4795-6.


Genome-wide association of yield traits in a nested association mapping population of barley reveals new gene diversity for future breeding.

Sharma R, Draicchio F, Bull H, Herzig P, Maurer A, Pillen K, Thomas WTB, Flavell AJ.

J Exp Bot. 2018 Jul 18;69(16):3811-3822. doi: 10.1093/jxb/ery178.


Genome-Wide Association Analysis of Grain Yield-Associated Traits in a Pan-European Barley Cultivar Collection.

Xu X, Sharma R, Tondelli A, Russell J, Comadran J, Schnaithmann F, Pillen K, Kilian B, Cattivelli L, Thomas WTB, Flavell AJ.

Plant Genome. 2018 Mar;11(1). doi: 10.3835/plantgenome2017.08.0073.


Changes in isovitexin-O-glycosylation during the development of young barley plants.

Brauch D, Porzel A, Schumann E, Pillen K, Mock HP.

Phytochemistry. 2018 Apr;148:11-20. doi: 10.1016/j.phytochem.2018.01.001. Epub 2018 Feb 6.


Identification of QTL conferring resistance to stripe rust (Puccinia striiformis f. sp. hordei) and leaf rust (Puccinia hordei) in barley using nested association mapping (NAM).

Vatter T, Maurer A, Perovic D, Kopahnke D, Pillen K, Ordon F.

PLoS One. 2018 Jan 25;13(1):e0191666. doi: 10.1371/journal.pone.0191666. eCollection 2018.


Genome scan identifies flowering-independent effects of barley HsDry2.2 locus on yield traits under water deficit.

Merchuk-Ovnat L, Silberman R, Laiba E, Maurer A, Pillen K, Faigenboim A, Fridman E.

J Exp Bot. 2018 Mar 24;69(7):1765-1779. doi: 10.1093/jxb/ery016.


Contrasting genetic regulation of plant development in wild barley grown in two European environments revealed by nested association mapping.

Herzig P, Maurer A, Draba V, Sharma R, Draicchio F, Bull H, Milne L, Thomas WTB, Flavell AJ, Pillen K.

J Exp Bot. 2018 Mar 24;69(7):1517-1531. doi: 10.1093/jxb/ery002.


A donor-specific QTL, exhibiting allelic variation for leaf sheath hairiness in a nested association mapping population, is located on barley chromosome 4H.

Saade S, Kutlu B, Draba V, Förster K, Schumann E, Tester M, Pillen K, Maurer A.

PLoS One. 2017 Dec 7;12(12):e0189446. doi: 10.1371/journal.pone.0189446. eCollection 2017.


Genome-Wide Association Study of Calcium Accumulation in Grains of European Wheat Cultivars.

Alomari DZ, Eggert K, von Wirén N, Pillen K, Röder MS.

Front Plant Sci. 2017 Oct 27;8:1797. doi: 10.3389/fpls.2017.01797. eCollection 2017.


Genetic and physical mapping of anther extrusion in elite European winter wheat.

Muqaddasi QH, Pillen K, Plieske J, Ganal MW, Röder MS.

PLoS One. 2017 Nov 9;12(11):e0187744. doi: 10.1371/journal.pone.0187744. eCollection 2017.


A nested association mapping population identifies multiple small effect QTL conferring resistance against net blotch (Pyrenophora teres f. teres) in wild barley.

Vatter T, Maurer A, Kopahnke D, Perovic D, Ordon F, Pillen K.

PLoS One. 2017 Oct 26;12(10):e0186803. doi: 10.1371/journal.pone.0186803. eCollection 2017.


QTL controlling grain filling under terminal drought stress in a set of wild barley introgression lines.

Honsdorf N, March TJ, Pillen K.

PLoS One. 2017 Oct 20;12(10):e0185983. doi: 10.1371/journal.pone.0185983. eCollection 2017.


Exotic QTL improve grain quality in the tri-parental wheat population SW84.

Nedelkou IP, Maurer A, Schubert A, Léon J, Pillen K.

PLoS One. 2017 Jul 7;12(7):e0179851. doi: 10.1371/journal.pone.0179851. eCollection 2017.


Genetic Architecture of Anther Extrusion in Spring and Winter Wheat.

Muqaddasi QH, Brassac J, Börner A, Pillen K, Röder MS.

Front Plant Sci. 2017 May 16;8:754. doi: 10.3389/fpls.2017.00754. eCollection 2017.


Genome-Based Identification of Heterotic Patterns in Rice.

Beukert U, Li Z, Liu G, Zhao Y, Ramachandra N, Mirdita V, Pita F, Pillen K, Reif JC.

Rice (N Y). 2017 Dec;10(1):22. doi: 10.1186/s12284-017-0163-4. Epub 2017 May 19.


Growth curve registration for evaluating salinity tolerance in barley.

Meng R, Saade S, Kurtek S, Berger B, Brien C, Pillen K, Tester M, Sun Y.

Plant Methods. 2017 Mar 23;13:18. doi: 10.1186/s13007-017-0165-7. eCollection 2017.


Editorial: Recent Advances in Flowering Time Control.

Jung C, Pillen K, Staiger D, Coupland G, von Korff M.

Front Plant Sci. 2017 Jan 5;7:2011. doi: 10.3389/fpls.2016.02011. eCollection 2016. No abstract available.


Estimating parent-specific QTL effects through cumulating linked identity-by-state SNP effects in multiparental populations.

Maurer A, Sannemann W, Léon J, Pillen K.

Heredity (Edinb). 2017 May;118(5):477-485. doi: 10.1038/hdy.2016.121. Epub 2016 Dec 14.


Genomic Prediction of Barley Hybrid Performance.

Philipp N, Liu G, Zhao Y, He S, Spiller M, Stiewe G, Pillen K, Reif JC, Li Z.

Plant Genome. 2016 Jul;9(2). doi: 10.3835/plantgenome2016.02.0016.


Yield-related salinity tolerance traits identified in a nested association mapping (NAM) population of wild barley.

Saade S, Maurer A, Shahid M, Oakey H, Schmöckel SM, Negrão S, Pillen K, Tester M.

Sci Rep. 2016 Sep 2;6:32586. doi: 10.1038/srep32586.


Geography of Genetic Structure in Barley Wild Relative Hordeum vulgare subsp. spontaneum in Jordan.

Thormann I, Reeves P, Reilley A, Engels JM, Lohwasser U, Börner A, Pillen K, Richards CM.

PLoS One. 2016 Aug 11;11(8):e0160745. doi: 10.1371/journal.pone.0160745. eCollection 2016.


Genome-Wide Association Mapping of Anther Extrusion in Hexaploid Spring Wheat.

Muqaddasi QH, Lohwasser U, Nagel M, Börner A, Pillen K, Röder MS.

PLoS One. 2016 May 18;11(5):e0155494. doi: 10.1371/journal.pone.0155494. eCollection 2016.


Quantitative Trait Loci and Inter-Organ Partitioning for Essential Metal and Toxic Analogue Accumulation in Barley.

Reuscher S, Kolter A, Hoffmann A, Pillen K, Krämer U.

PLoS One. 2016 Apr 14;11(4):e0153392. doi: 10.1371/journal.pone.0153392. eCollection 2016.


Genomic dissection of plant development and its impact on thousand grain weight in barley through nested association mapping.

Maurer A, Draba V, Pillen K.

J Exp Bot. 2016 Apr;67(8):2507-18. doi: 10.1093/jxb/erw070. Epub 2016 Mar 1.


Modelling the genetic architecture of flowering time control in barley through nested association mapping.

Maurer A, Draba V, Jiang Y, Schnaithmann F, Sharma R, Schumann E, Kilian B, Reif JC, Pillen K.

BMC Genomics. 2015 Apr 12;16:290. doi: 10.1186/s12864-015-1459-7.


Wild barley introgression lines revealed novel QTL alleles for root and related shoot traits in the cultivated barley (Hordeum vulgare L.).

Naz AA, Arifuzzaman M, Muzammil S, Pillen K, Léon J.

BMC Genet. 2014 Oct 7;15:107. doi: 10.1186/s12863-014-0107-6.


Evolutionary conserved function of barley and Arabidopsis 3-KETOACYL-CoA SYNTHASES in providing wax signals for germination of powdery mildew fungi.

Weidenbach D, Jansen M, Franke RB, Hensel G, Weissgerber W, Ulferts S, Jansen I, Schreiber L, Korzun V, Pontzen R, Kumlehn J, Pillen K, Schaffrath U.

Plant Physiol. 2014 Nov;166(3):1621-33. doi: 10.1104/pp.114.246348. Epub 2014 Sep 8.


High-throughput phenotyping to detect drought tolerance QTL in wild barley introgression lines.

Honsdorf N, March TJ, Berger B, Tester M, Pillen K.

PLoS One. 2014 May 13;9(5):e97047. doi: 10.1371/journal.pone.0097047. eCollection 2014.


A first step toward the development of a barley NAM population and its utilization to detect QTLs conferring leaf rust seedling resistance.

Schnaithmann F, Kopahnke D, Pillen K.

Theor Appl Genet. 2014 Jul;127(7):1513-25. doi: 10.1007/s00122-014-2315-x. Epub 2014 May 6.


Copy number variation of chromosome 5A and its association with Q gene expression, morphological aberrations, and agronomic performance of winter wheat cultivars.

Förster S, Schumann E, Baumann M, Weber WE, Pillen K.

Theor Appl Genet. 2013 Sep 28. [Epub ahead of print]


Detection of nitrogen deficiency QTL in juvenile wild barley introgression lines growing in a hydroponic system.

Hoffmann A, Maurer A, Pillen K.

BMC Genet. 2012 Oct 20;13:88. doi: 10.1186/1471-2156-13-88.


Identification of proteins associated with malting quality in a subset of wild barley introgression lines.

March TJ, Richter D, Colby T, Harzen A, Schmidt J, Pillen K.

Proteomics. 2012 Sep;12(18):2843-51. doi: 10.1002/pmic.201200117.


AB-QTL analysis reveals new alleles associated to proline accumulation and leaf wilting under drought stress conditions in barley (Hordeum vulgare L.).

Sayed MA, Schumann H, Pillen K, Naz AA, Léon J.

BMC Genet. 2012 Jul 20;13:61. doi: 10.1186/1471-2156-13-61.


High-Resolution Genotyping of Wild Barley Introgression Lines and Fine-Mapping of the Threshability Locus thresh-1 Using the Illumina GoldenGate Assay.

Schmalenbach I, March TJ, Bringezu T, Waugh R, Pillen K.

G3 (Bethesda). 2011 Aug;1(3):187-96. doi: 10.1534/g3.111.000182. Epub 2011 Aug 1.


Detection of epistatic interactions between exotic alleles introgressed from wild barley (H. vulgare ssp. spontaneum).

von Korff M, Léon J, Pillen K.

Theor Appl Genet. 2010 Nov;121(8):1455-64. doi: 10.1007/s00122-010-1401-y. Epub 2010 Jul 9.


Association of barley photoperiod and vernalization genes with QTLs for flowering time and agronomic traits in a BC2DH population and a set of wild barley introgression lines.

Wang G, Schmalenbach I, von Korff M, Léon J, Kilian B, Rode J, Pillen K.

Theor Appl Genet. 2010 May;120(8):1559-74. doi: 10.1007/s00122-010-1276-y. Epub 2010 Feb 13.


Advanced backcross-QTL analysis in spring barley (H. vulgare ssp. spontaneum) comparing a REML versus a Bayesian model in multi-environmental field trials.

Bauer AM, Hoti F, von Korff M, Pillen K, Léon J, Sillanpää MJ.

Theor Appl Genet. 2009 Jun;119(1):105-23. doi: 10.1007/s00122-009-1021-6. Epub 2009 Apr 11.


Detection and verification of malting quality QTLs using wild barley introgression lines.

Schmalenbach I, Pillen K.

Theor Appl Genet. 2009 May;118(8):1411-27. doi: 10.1007/s00122-009-0991-8. Epub 2009 Mar 3.


Identification and verification of QTLs for agronomic traits using wild barley introgression lines.

Schmalenbach I, Léon J, Pillen K.

Theor Appl Genet. 2009 Feb;118(3):483-97. doi: 10.1007/s00122-008-0915-z. Epub 2008 Nov 1.


Selecting a set of wild barley introgression lines and verification of QTL effects for resistance to powdery mildew and leaf rust.

Schmalenbach I, Körber N, Pillen K.

Theor Appl Genet. 2008 Nov;117(7):1093-106. doi: 10.1007/s00122-008-0847-7. Epub 2008 Jul 29.


AB-QTL analysis in winter wheat: II. Genetic analysis of seedling and field resistance against leaf rust in a wheat advanced backcross population.

Naz AA, Kunert A, Lind V, Pillen K, Léon J.

Theor Appl Genet. 2008 May;116(8):1095-104. doi: 10.1007/s00122-008-0738-y.

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