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Items: 9

1.

SSEThread: Integrative threading of the DNA-PKcs sequence based on data from chemical cross-linking and hydrogen deuterium exchange.

Saltzberg DJ, Hepburn M, Pilla KB, Schriemer DC, Lees-Miller SP, Blundell TL, Sali A.

Prog Biophys Mol Biol. 2019 Oct;147:92-102. doi: 10.1016/j.pbiomolbio.2019.09.003. Epub 2019 Sep 27.

PMID:
31570166
2.

Molecular modeling of biomolecules by paramagnetic NMR and computational hybrid methods.

Pilla KB, Gaalswyk K, MacCallum JL.

Biochim Biophys Acta Proteins Proteom. 2017 Nov;1865(11 Pt B):1654-1663. doi: 10.1016/j.bbapap.2017.06.016. Epub 2017 Jun 22. Review.

PMID:
28648524
3.

Protein Structure Determination by Assembling Super-Secondary Structure Motifs Using Pseudocontact Shifts.

Pilla KB, Otting G, Huber T.

Structure. 2017 Mar 7;25(3):559-568. doi: 10.1016/j.str.2017.01.011. Epub 2017 Feb 16.

4.

3D Computational Modeling of Proteins Using Sparse Paramagnetic NMR Data.

Pilla KB, Otting G, Huber T.

Methods Mol Biol. 2017;1526:3-21.

PMID:
27896733
5.

Sensitive NMR Approach for Determining the Binding Mode of Tightly Binding Ligand Molecules to Protein Targets.

Chen WN, Nitsche C, Pilla KB, Graham B, Huber T, Klein CD, Otting G.

J Am Chem Soc. 2016 Apr 6;138(13):4539-46. doi: 10.1021/jacs.6b00416. Epub 2016 Mar 24.

PMID:
26974502
6.

Pseudocontact Shift-Driven Iterative Resampling for 3D Structure Determinations of Large Proteins.

Pilla KB, Otting G, Huber T.

J Mol Biol. 2016 Jan 29;428(2 Pt B):522-32. doi: 10.1016/j.jmb.2016.01.007. Epub 2016 Jan 15.

PMID:
26778618
7.

Capturing conformational States in proteins using sparse paramagnetic NMR data.

Pilla KB, Leman JK, Otting G, Huber T.

PLoS One. 2015 May 18;10(5):e0127053. doi: 10.1371/journal.pone.0127053. eCollection 2015.

8.

Magic angle spinning NMR structure determination of proteins from pseudocontact shifts.

Li J, Pilla KB, Li Q, Zhang Z, Su X, Huber T, Yang J.

J Am Chem Soc. 2013 Jun 5;135(22):8294-303. doi: 10.1021/ja4021149. Epub 2013 May 24.

PMID:
23646876
9.

Three-dimensional protein fold determination from backbone amide pseudocontact shifts generated by lanthanide tags at multiple sites.

Yagi H, Pilla KB, Maleckis A, Graham B, Huber T, Otting G.

Structure. 2013 Jun 4;21(6):883-90. doi: 10.1016/j.str.2013.04.001. Epub 2013 May 2.

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