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Items: 14

1.

Interpreting Whole-Genome Sequence Analyses of Foodborne Bacteria for Regulatory Applications and Outbreak Investigations.

Pightling AW, Pettengill JB, Luo Y, Baugher JD, Rand H, Strain E.

Front Microbiol. 2018 Jul 10;9:1482. doi: 10.3389/fmicb.2018.01482. eCollection 2018.

2.

Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis.

Gentekaki E, Curtis BA, Stairs CW, Klimeš V, Eliáš M, Salas-Leiva DE, Herman EK, Eme L, Arias MC, Henrissat B, Hilliou F, Klute MJ, Suga H, Malik SB, Pightling AW, Kolisko M, Rachubinski RA, Schlacht A, Soanes DM, Tsaousis AD, Archibald JM, Ball SG, Dacks JB, Clark CG, van der Giezen M, Roger AJ.

PLoS Biol. 2017 Sep 11;15(9):e2003769. doi: 10.1371/journal.pbio.2003769. eCollection 2017 Sep.

3.

Real-Time Pathogen Detection in the Era of Whole-Genome Sequencing and Big Data: Comparison of k-mer and Site-Based Methods for Inferring the Genetic Distances among Tens of Thousands of Salmonella Samples.

Pettengill JB, Pightling AW, Baugher JD, Rand H, Strain E.

PLoS One. 2016 Nov 10;11(11):e0166162. doi: 10.1371/journal.pone.0166162. eCollection 2016.

4.

Genome Sequence of the Listeria monocytogenes Food Isolate HPB913, Collected in Canada in 1993.

Pightling AW, Rand H, Strain E, Pagotto F.

Genome Announc. 2016 Sep 15;4(5). pii: e00911-16. doi: 10.1128/genomeA.00911-16.

5.

Genome Sequence of Listeria monocytogenes Strain HPB2088 (Serotype 1/2a), an Environmental Isolate Collected in Canada in 1994.

Pightling AW, Rand H, Strain E, Pagotto F.

Genome Announc. 2016 Aug 4;4(4). pii: e00760-16. doi: 10.1128/genomeA.00760-16.

6.
7.

Genomic Features of Environmental and Clinical Vibrio parahaemolyticus Isolates Lacking Recognized Virulence Factors Are Dissimilar.

Ronholm J, Petronella N, Chew Leung C, Pightling AW, Banerjee SK.

Appl Environ Microbiol. 2015 Dec 4;82(4):1102-1113. doi: 10.1128/AEM.03465-15. Print 2016 Feb 15.

8.
9.

Genome Sequence of Listeria monocytogenes Strain HPB5415, Collected during a 2008 Listeriosis Outbreak in Canada.

Pightling AW, Pagotto F.

Genome Announc. 2015 Jun 11;3(3). pii: e00637-15. doi: 10.1128/genomeA.00637-15.

10.

Draft Genome Sequences of Two Clostridium botulinum Group II (Nonproteolytic) Type B Strains (DB-2 and KAPB-3).

Petronella N, Kenwell R, Pagotto F, Pightling AW.

Genome Announc. 2014 Nov 6;2(6). pii: e01111-14. doi: 10.1128/genomeA.01111-14.

11.

Choice of reference sequence and assembler for alignment of Listeria monocytogenes short-read sequence data greatly influences rates of error in SNP analyses.

Pightling AW, Petronella N, Pagotto F.

PLoS One. 2014 Aug 21;9(8):e104579. doi: 10.1371/journal.pone.0104579. eCollection 2014.

12.

Draft Genome Sequence of Cronobacter sakazakii Clonal Complex 45 Strain HPB5174, Isolated from a Powdered Infant Formula Facility in Ireland.

Pightling AW, Pagotto F.

Genome Announc. 2014 Aug 7;2(4). pii: e00778-14. doi: 10.1128/genomeA.00778-14.

13.
14.

An expanded inventory of conserved meiotic genes provides evidence for sex in Trichomonas vaginalis.

Malik SB, Pightling AW, Stefaniak LM, Schurko AM, Logsdon JM Jr.

PLoS One. 2007 Aug 6;3(8):e2879. doi: 10.1371/journal.pone.0002879.

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