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Items: 1 to 50 of 152


Bioprospecting Plant Growth-Promoting Rhizobacteria That Mitigate Drought Stress in Grasses.

Jochum MD, McWilliams KL, Borrego EJ, Kolomiets MV, Niu G, Pierson EA, Jo YK.

Front Microbiol. 2019 Sep 10;10:2106. doi: 10.3389/fmicb.2019.02106. eCollection 2019.


Predicting pregnancy using large-scale data from a women's health tracking mobile application.

Liu B, Shi S, Wu Y, Thomas D, Symul L, Pierson E, Leskovec J.

Proc Int World Wide Web Conf. 2019 May;2019:2999-3005. doi: 10.1145/3308558.3313512.


Inferring Multidimensional Rates of Aging from Cross-Sectional Data.

Pierson E, Koh PW, Hashimoto T, Koller D, Leskovec J, Eriksson N, Liang P.

Proc Mach Learn Res. 2019 Apr;89:97-107.


Drought-Stress Tolerance in Wheat Seedlings Conferred by Phenazine-Producing Rhizobacteria.

Mahmoudi TR, Yu JM, Liu S, Pierson LS 3rd, Pierson EA.

Front Microbiol. 2019 Jul 10;10:1590. doi: 10.3389/fmicb.2019.01590. eCollection 2019.


Draft Genome Sequence of Enterobacter sp. Strain OLF, a Colonizer of Olive Flies.

Estes AM, Hearn DJ, Nadendla S, Pierson EA, Dunning Hotopp JC.

Microbiol Resour Announc. 2018 Sep 6;7(9). pii: e01068-18. doi: 10.1128/MRA.01068-18. eCollection 2018 Sep.


Draft Genome Sequence of Erwinia dacicola, a Dominant Endosymbiont of Olive Flies.

Estes AM, Hearn DJ, Nadendla S, Pierson EA, Dunning Hotopp JC.

Microbiol Resour Announc. 2018 Sep 13;7(10). pii: e01067-18. doi: 10.1128/MRA.01067-18. eCollection 2018 Sep.


Comparative genomics of the Erwinia and Enterobacter olive fly endosymbionts.

Estes AM, Hearn DJ, Agrawal S, Pierson EA, Dunning Hotopp JC.

Sci Rep. 2018 Oct 29;8(1):15936. doi: 10.1038/s41598-018-33809-w.


Pseudomonas chlororaphis Produces Multiple R-Tailocin Particles That Broaden the Killing Spectrum and Contribute to Persistence in Rhizosphere Communities.

Dorosky RJ, Pierson LS 3rd, Pierson EA.

Appl Environ Microbiol. 2018 Aug 31;84(18). pii: e01230-18. doi: 10.1128/AEM.01230-18. Print 2018 Sep 15.


Modeling Individual Cyclic Variation in Human Behavior.

Pierson E, Althoff T, Leskovec J.

Proc Int World Wide Web Conf. 2018 Apr;2018:107-116. doi: 10.1145/3178876.3186052.


Multiple Pathways in Capsid Assembly.

Lutomski CA, Lyktey NA, Pierson EE, Zhao Z, Zlotnick A, Jarrold MF.

J Am Chem Soc. 2018 May 2;140(17):5784-5790. doi: 10.1021/jacs.8b01804. Epub 2018 Apr 19.


Higher Absolute Lymphocyte Counts Predict Lower Mortality from Early-Stage Triple-Negative Breast Cancer.

Afghahi A, Purington N, Han SS, Desai M, Pierson E, Mathur MB, Seto T, Thompson CA, Rigdon J, Telli ML, Badve SS, Curtis CN, West RB, Horst K, Gomez SL, Ford JM, Sledge GW, Kurian AW.

Clin Cancer Res. 2018 Jun 15;24(12):2851-2858. doi: 10.1158/1078-0432.CCR-17-1323. Epub 2018 Mar 26.


Soil Bacterial Community Was Changed after Brassicaceous Seed Meal Application for Suppression of Fusarium Wilt on Pepper.

Ren G, Ma Y, Guo D, Gentry TJ, Hu P, Pierson EA, Gu M.

Front Microbiol. 2018 Feb 13;9:185. doi: 10.3389/fmicb.2018.00185. eCollection 2018.


An upstream sequence modulates phenazine production at the level of transcription and translation in the biological control strain Pseudomonas chlororaphis 30-84.

Yu JM, Wang D, Ries TR, Pierson LS 3rd, Pierson EA.

PLoS One. 2018 Feb 16;13(2):e0193063. doi: 10.1371/journal.pone.0193063. eCollection 2018.


Effect of Producing Different Phenazines on Bacterial Fitness and Biological Control in Pseudomonas chlororaphis 30-84.

Yu JM, Wang D, Pierson LS 3rd, Pierson EA.

Plant Pathol J. 2018 Feb;34(1):44-58. doi: 10.5423/PPJ.FT.12.2017.0277. Epub 2018 Feb 1.


SIMLR: A Tool for Large-Scale Genomic Analyses by Multi-Kernel Learning.

Wang B, Ramazzotti D, De Sano L, Zhu J, Pierson E, Batzoglou S.

Proteomics. 2018 Jan;18(2). doi: 10.1002/pmic.201700232.


Global gene expression in two potato cultivars in response to 'Candidatus Liberibacter solanacearum' infection.

Levy JG, Mendoza A, Miller JC Jr, Tamborindeguy C, Pierson EA.

BMC Genomics. 2017 Dec 11;18(1):960. doi: 10.1186/s12864-017-4313-2.


Hepatitis B Virus Capsid Completion Occurs through Error Correction.

Lutomski CA, Lyktey NA, Zhao Z, Pierson EE, Zlotnick A, Jarrold MF.

J Am Chem Soc. 2017 Nov 22;139(46):16932-16938. doi: 10.1021/jacs.7b09932. Epub 2017 Nov 10.


Characterization of the Serralysin-Like Gene of 'Candidatus Liberibacter solanacearum' Associated with Potato Zebra Chip Disease.

Ravindran A, Saenkham P, Levy J, Tamborindeguy C, Lin H, Gross DC, Pierson E.

Phytopathology. 2018 Mar;108(3):327-335. doi: 10.1094/PHYTO-02-17-0064-R. Epub 2018 Feb 1.


Denoising genome-wide histone ChIP-seq with convolutional neural networks.

Koh PW, Pierson E, Kundaje A.

Bioinformatics. 2017 Jul 15;33(14):i225-i233. doi: 10.1093/bioinformatics/btx243.


A molecular breadboard: Removal and replacement of subunits in a hepatitis B virus capsid.

Lee LS, Brunk N, Haywood DG, Keifer D, Pierson E, Kondylis P, Wang JC, Jacobson SC, Jarrold MF, Zlotnick A.

Protein Sci. 2017 Nov;26(11):2170-2180. doi: 10.1002/pro.3265. Epub 2017 Sep 16.


The Candidatus Liberibacter-Host Interface: Insights into Pathogenesis Mechanisms and Disease Control.

Wang N, Pierson EA, Setubal JC, Xu J, Levy JG, Zhang Y, Li J, Rangel LT, Martins J Jr.

Annu Rev Phytopathol. 2017 Aug 4;55:451-482. doi: 10.1146/annurev-phyto-080516-035513. Epub 2017 Jun 21. Review.


Pseudomonas chlororaphis Produces Two Distinct R-Tailocins That Contribute to Bacterial Competition in Biofilms and on Roots.

Dorosky RJ, Yu JM, Pierson LS 3rd, Pierson EA.

Appl Environ Microbiol. 2017 Jul 17;83(15). pii: e00706-17. doi: 10.1128/AEM.00706-17. Print 2017 Aug 1.


Charge detection mass spectrometry: weighing heavier things.

Keifer DZ, Pierson EE, Jarrold MF.

Analyst. 2017 May 21;142(10):1654-1671. doi: 10.1039/c7an00277g. Epub 2017 Apr 26.


GM-CSF is not essential for experimental autoimmune encephalomyelitis but promotes brain-targeted disease.

Pierson ER, Goverman JM.

JCI Insight. 2017 Apr 6;2(7):e92362. doi: 10.1172/jci.insight.92362.


Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning.

Wang B, Zhu J, Pierson E, Ramazzotti D, Batzoglou S.

Nat Methods. 2017 Apr;14(4):414-416. doi: 10.1038/nmeth.4207. Epub 2017 Mar 6.


Disruption of MiaA provides insights into the regulation of phenazine biosynthesis under suboptimal growth conditions in Pseudomonas chlororaphis 30-84.

Yu JM, Wang D, Pierson LS, Pierson EA.

Microbiology. 2017 Jan;163(1):94-108. doi: 10.1099/mic.0.000409. Epub 2017 Feb 8.


Hydration and Fluid Replacement Knowledge, Attitudes, Barriers, and Behaviors of NCAA Division 1 American Football Players.

Judge LW, Kumley RF, Bellar DM, Pike KL, Pierson EE, Weidner T, Pearson D, Friesen CA.

J Strength Cond Res. 2016 Nov;30(11):2972-2978.


Why we are fighting the Medical Device Excise Tax.

Nagel N, O'Neill K, Pierson E, Good-Cohn M.

Am J Orthod Dentofacial Orthop. 2016 Oct;150(4):553-555. doi: 10.1016/j.ajodo.2016.07.004. No abstract available.


Distinct T cell signatures define subsets of patients with multiple sclerosis.

Johnson MC, Pierson ER, Spieker AJ, Nielsen AS, Posso S, Kita M, Buckner JH, Goverman JM.

Neurol Neuroimmunol Neuroinflamm. 2016 Aug 23;3(5):e278. doi: 10.1212/NXI.0000000000000278. eCollection 2016 Oct.


Importin β Can Bind Hepatitis B Virus Core Protein and Empty Core-Like Particles and Induce Structural Changes.

Chen C, Wang JC, Pierson EE, Keifer DZ, Delaleau M, Gallucci L, Cazenave C, Kann M, Jarrold MF, Zlotnick A.

PLoS Pathog. 2016 Aug 12;12(8):e1005802. doi: 10.1371/journal.ppat.1005802. eCollection 2016 Aug.


New and Evolving Techniques for the Characterization of Peptide Therapeutics.

D'Addio SM, Bothe JR, Neri C, Walsh PL, Zhang J, Pierson E, Mao Y, Gindy M, Leone A, Templeton AC.

J Pharm Sci. 2016 Oct;105(10):2989-3006. doi: 10.1016/j.xphs.2016.06.011. Epub 2016 Aug 4. Review.


The contribution of neutrophils to CNS autoimmunity.

Pierson ER, Wagner CA, Goverman JM.

Clin Immunol. 2018 Apr;189:23-28. doi: 10.1016/j.clim.2016.06.017. Epub 2016 Jul 1. Review.


Resolving Adeno-Associated Viral Particle Diversity With Charge Detection Mass Spectrometry.

Pierson EE, Keifer DZ, Asokan A, Jarrold MF.

Anal Chem. 2016 Jul 5;88(13):6718-25. doi: 10.1021/acs.analchem.6b00883. Epub 2016 Jun 16.


The Phenazine 2-Hydroxy-Phenazine-1-Carboxylic Acid Promotes Extracellular DNA Release and Has Broad Transcriptomic Consequences in Pseudomonas chlororaphis 30-84.

Wang D, Yu JM, Dorosky RJ, Pierson LS 3rd, Pierson EA.

PLoS One. 2016 Jan 26;11(1):e0148003. doi: 10.1371/journal.pone.0148003. eCollection 2016.


ZIFA: Dimensionality reduction for zero-inflated single-cell gene expression analysis.

Pierson E, Yau C.

Genome Biol. 2015 Nov 2;16:241. doi: 10.1186/s13059-015-0805-z.


Settling and Ovipositional Behavior of Bactericera cockerelli (Hemiptera: Triozidae) on Solanaceous Hosts Under Field and Laboratory Conditions.

Thinakaran J, Pierson EA, Longnecker M, Tamborindeguy C, Munyaneza JE, Rush CM, Henne DC.

J Econ Entomol. 2015 Jun;108(3):904-16. doi: 10.1093/jee/tov058. Epub 2015 Apr 4.


A Predictive Degree Day Model for the Development of Bactericera cockerelli (Hemiptera: Triozidae) Infesting Solanum tuberosum.

Lewis OM, Michels GJ, Pierson EA, Heinz KM.

Environ Entomol. 2015 Aug;44(4):1201-9. doi: 10.1093/ee/nvv078. Epub 2015 May 28.


Charge Detection Mass Spectrometry Identifies Preferred Non-Icosahedral Polymorphs in the Self-Assembly of Woodchuck Hepatitis Virus Capsids.

Pierson EE, Keifer DZ, Kukreja AA, Wang JC, Zlotnick A, Jarrold MF.

J Mol Biol. 2016 Jan 29;428(2 Pt A):292-300. doi: 10.1016/j.jmb.2015.06.019. Epub 2015 Jul 4.


Silverleaf Nightshade (Solanum elaeagnifolium), a Reservoir Host for 'Candidatus Liberibacter solanacearum', the Putative Causal Agent of Zebra Chip Disease of Potato.

Thinakaran J, Pierson E, Kunta M, Munyaneza JE, Rush CM, Henne DC.

Plant Dis. 2015 Jul;99(7):910-915. doi: 10.1094/PDIS-12-14-1254-RE. Epub 2015 May 15.


Loop-Mediated Isothermal Amplification Procedure (LAMP) for Detection of the Potato Zebra Chip Pathogen "Candidatus Liberibacter solanacearum".

Ravindran A, Lévy J, Pierson E, Gross DC.

Methods Mol Biol. 2015;1302:85-97. doi: 10.1007/978-1-4939-2620-6_7.


Sharing and Specificity of Co-expression Networks across 35 Human Tissues.

Pierson E; GTEx Consortium, Koller D, Battle A, Mostafavi S, Ardlie KG, Getz G, Wright FA, Kellis M, Volpi S, Dermitzakis ET.

PLoS Comput Biol. 2015 May 13;11(5):e1004220. doi: 10.1371/journal.pcbi.1004220. eCollection 2015 May.


Charge Detection Mass Spectrometry for Single Ions with an Uncertainty in the Charge Measurement of 0.65 e.

Pierson EE, Contino NC, Keifer DZ, Jarrold MF.

J Am Soc Mass Spectrom. 2015 Jul;26(7):1213-20. doi: 10.1007/s13361-015-1126-x. Epub 2015 Apr 14.


Draft Genome Sequence of Enterobacter cloacae Strain S611.

Wang D, Han CS, Dichosa AE, Gleasner CD, Johnson SL, Daligault HE, Davenport KW, Li PE, Pierson EA, Pierson LS 3rd.

Genome Announc. 2014 Dec 11;2(6). pii: e00710-14. doi: 10.1128/genomeA.00710-14.


Uncertainty and denial: a resource-rational model of the value of information.

Pierson E, Goodman N.

PLoS One. 2014 Nov 26;9(11):e113342. doi: 10.1371/journal.pone.0113342. eCollection 2014.


Adaptation genomics of a small-colony variant in a Pseudomonas chlororaphis 30-84 biofilm.

Wang D, Dorosky RJ, Han CS, Lo CC, Dichosa AE, Chain PS, Yu JM, Pierson LS 3rd, Pierson EA.

Appl Environ Microbiol. 2015 Feb;81(3):890-9. doi: 10.1128/AEM.02617-14. Epub 2014 Nov 21.


Structurally similar woodchuck and human hepadnavirus core proteins have distinctly different temperature dependences of assembly.

Kukreja AA, Wang JC, Pierson E, Keifer DZ, Selzer L, Tan Z, Dragnea B, Jarrold MF, Zlotnick A.

J Virol. 2014 Dec;88(24):14105-15. doi: 10.1128/JVI.01840-14. Epub 2014 Sep 24.


Detection of late intermediates in virus capsid assembly by charge detection mass spectrometry.

Pierson EE, Keifer DZ, Selzer L, Lee LS, Contino NC, Wang JC, Zlotnick A, Jarrold MF.

J Am Chem Soc. 2014 Mar 5;136(9):3536-41. doi: 10.1021/ja411460w. Epub 2014 Feb 19.


Charge detection mass spectrometry of bacteriophage P22 procapsid distributions above 20 MDa.

Keifer DZ, Pierson EE, Hogan JA, Bedwell GJ, Prevelige PE, Jarrold MF.

Rapid Commun Mass Spectrom. 2014 Mar 15;28(5):483-8. doi: 10.1002/rcm.6809.


Exertional rhabdomyolysis of the elbow flexor muscles from weight lifting.

Pierson EH, Bantum BM, Schaefer MP.

PM R. 2014 Jun;6(6):556-9. doi: 10.1016/j.pmrj.2014.01.016. Epub 2014 Jan 29. Review.


Draft Genome Sequence of Pseudomonas putida Strain S610, a Seed-Borne Bacterium of Wheat.

Wang D, Han CS, Dichosa AE, Gleasner CD, Johnson SL, Daligault HE, Davenport KW, Li PE, Pierson EA, Pierson LS 3rd.

Genome Announc. 2013 Dec 26;1(6). pii: e01048-13. doi: 10.1128/genomeA.01048-13.

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