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Items: 1 to 50 of 105


The effect of Zika virus infection in the ferret.

Hutchinson EB, Chatterjee M, Reyes L, Djankpa FT, Valiant WG, Dardzinski B, Mattapallil JJ, Pierpaoli C, Juliano SL.

J Comp Neurol. 2019 Jul 1;527(10):1706-1719. doi: 10.1002/cne.24640. Epub 2019 Feb 15.


The phenotypic landscape of a Tbc1d24 mutant mouse includes convulsive seizures resembling human early infantile epileptic encephalopathy.

Tona R, Chen W, Nakano Y, Reyes LD, Petralia RS, Wang YX, Starost MF, Wafa TT, Morell RJ, Cravedi KD, du Hoffmann J, Miyoshi T, Munasinghe JP, Fitzgerald TS, Chudasama Y, Omori K, Pierpaoli C, Banfi B, Dong L, Belyantseva IA, Friedman TB.

Hum Mol Genet. 2019 May 1;28(9):1530-1547. doi: 10.1093/hmg/ddy445.


Characterization and correlation of signal drift in diffusion weighted MRI.

Hansen CB, Nath V, Hainline AE, Schilling KG, Parvathaneni P, Bayrak RG, Blaber JA, Irfanoglu O, Pierpaoli C, Anderson AW, Rogers BP, Landman BA.

Magn Reson Imaging. 2019 Apr;57:133-142. doi: 10.1016/j.mri.2018.11.009. Epub 2018 Nov 22.


Evaluating corrections for Eddy-currents and other EPI distortions in diffusion MRI: methodology and a dataset for benchmarking.

Irfanoglu MO, Sarlls J, Nayak A, Pierpaoli C.

Magn Reson Med. 2019 Apr;81(4):2774-2787. doi: 10.1002/mrm.27577. Epub 2018 Nov 5.


Using double pulsed-field gradient MRI to study tissue microstructure in traumatic brain injury (TBI).

Komlosh ME, Benjamini D, Hutchinson EB, King S, Haber M, Avram AV, Holtzclaw LA, Desai A, Pierpaoli C, Basser PJ.

Microporous Mesoporous Mater. 2018 Oct;269:156-159. doi: 10.1016/j.micromeso.2017.05.030. Epub 2017 Mar 25.


Limits to anatomical accuracy of diffusion tractography using modern approaches.

Schilling KG, Nath V, Hansen C, Parvathaneni P, Blaber J, Gao Y, Neher P, Aydogan DB, Shi Y, Ocampo-Pineda M, Schiavi S, Daducci A, Girard G, Barakovic M, Rafael-Patino J, Romascano D, Rensonnet G, Pizzolato M, Bates A, Fischi E, Thiran JP, Canales-Rodríguez EJ, Huang C, Zhu H, Zhong L, Cabeen R, Toga AW, Rheault F, Theaud G, Houde JC, Sidhu J, Chamberland M, Westin CF, Dyrby TB, Verma R, Rathi Y, Irfanoglu MO, Thomas C, Pierpaoli C, Descoteaux M, Anderson AW, Landman BA.

Neuroimage. 2019 Jan 15;185:1-11. doi: 10.1016/j.neuroimage.2018.10.029. Epub 2018 Oct 11.


Tensor-based morphometry using scalar and directional information of diffusion tensor MRI data (DTBM): Application to hereditary spastic paraplegia.

Sadeghi N, Arrigoni F, D'Angelo MG, Thomas C, Irfanoglu MO, Hutchinson EB, Nayak A, Modi P, Bassi MT, Pierpaoli C.

Hum Brain Mapp. 2018 Dec;39(12):4643-4651. doi: 10.1002/hbm.24278. Epub 2018 Sep 25.


Detection and Distinction of Mild Brain Injury Effects in a Ferret Model Using Diffusion Tensor MRI (DTI) and DTI-Driven Tensor-Based Morphometry (D-TBM).

Hutchinson EB, Schwerin SC, Radomski KL, Sadeghi N, Komlosh ME, Irfanoglu MO, Juliano SL, Pierpaoli C.

Front Neurosci. 2018 Aug 17;12:573. doi: 10.3389/fnins.2018.00573. eCollection 2018.


Neuronal-Specific TUBB3 Is Not Required for Normal Neuronal Function but Is Essential for Timely Axon Regeneration.

Latremoliere A, Cheng L, DeLisle M, Wu C, Chew S, Hutchinson EB, Sheridan A, Alexandre C, Latremoliere F, Sheu SH, Golidy S, Omura T, Huebner EA, Fan Y, Whitman MC, Nguyen E, Hermawan C, Pierpaoli C, Tischfield MA, Woolf CJ, Engle EC.

Cell Rep. 2018 Aug 14;24(7):1865-1879.e9. doi: 10.1016/j.celrep.2018.07.029.


The spectrum of brainstem malformations associated to mutations of the tubulin genes family: MRI and DTI analysis.

Arrigoni F, Romaniello R, Peruzzo D, Poretti A, Bassi MT, Pierpaoli C, Valente EM, Nuovo S, Boltshauser E, Huisman TAGM, Triulzi F, Borgatti R.

Eur Radiol. 2019 Feb;29(2):770-782. doi: 10.1007/s00330-018-5610-0. Epub 2018 Jul 31.


Imitation Strategies in Callosotomized Patients.

Pierpaoli C, Foschi N, Cagnetti C, Ferrante L, Manzoni T, Polonara G, Fabri M.

Arch Ital Biol. 2018 Jul 1;156(1-2):12-26. doi: 10.12871/00039829201812.


Phantom-based field maps for gradient nonlinearity correction in diffusion imaging.

Rogers BP, Blaber J, Newton AT, Hansen CB, Welch EB, Anderson AW, Luci JJ, Pierpaoli C, Landman BA.

Proc SPIE Int Soc Opt Eng. 2018 Mar;10573. pii: 105733N. doi: 10.1117/12.2293786.


Impact of time-of-day on diffusivity measures of brain tissue derived from diffusion tensor imaging.

Thomas C, Sadeghi N, Nayak A, Trefler A, Sarlls J, Baker CI, Pierpaoli C.

Neuroimage. 2018 Jun;173:25-34. doi: 10.1016/j.neuroimage.2018.02.026. Epub 2018 Feb 16.


"The Journey I Have Been Through": The Role of Religion and Spirituality in Aging Well Among HIV-Positive Older Adults.

Emlet CA, Harris L, Pierpaoli CM, Furlotte C.

Res Aging. 2018 Mar;40(3):257-280. doi: 10.1177/0164027517697115. Epub 2017 Mar 6.


Progression of histopathological and behavioral abnormalities following mild traumatic brain injury in the male ferret.

Schwerin SC, Chatterjee M, Imam-Fulani AO, Radomski KL, Hutchinson EB, Pierpaoli CM, Juliano SL.

J Neurosci Res. 2018 Apr;96(4):556-572. doi: 10.1002/jnr.24218. Epub 2018 Jan 23.


Defining an Analytic Framework to Evaluate Quantitative MRI Markers of Traumatic Axonal Injury: Preliminary Results in a Mouse Closed Head Injury Model.

Haber M, Hutchinson EB, Sadeghi N, Cheng WH, Namjoshi D, Cripton P, Irfanoglu MO, Wellington C, Diaz-Arrastia R, Pierpaoli C.

eNeuro. 2017 Sep 13;4(5). pii: ENEURO.0164-17.2017. doi: 10.1523/ENEURO.0164-17.2017. eCollection 2017 Sep-Oct.


Diffusion MRI and the detection of alterations following traumatic brain injury.

Hutchinson EB, Schwerin SC, Avram AV, Juliano SL, Pierpaoli C.

J Neurosci Res. 2018 Apr;96(4):612-625. doi: 10.1002/jnr.24065. Epub 2017 Jun 13. Review.


Establishing the ferret as a gyrencephalic animal model of traumatic brain injury: Optimization of controlled cortical impact procedures.

Schwerin SC, Hutchinson EB, Radomski KL, Ngalula KP, Pierpaoli CM, Juliano SL.

J Neurosci Methods. 2017 Jun 15;285:82-96. doi: 10.1016/j.jneumeth.2017.05.010. Epub 2017 May 10.


Effects of Home-Delivered Cognitive Behavioral Therapy (CBT) for Depression on Anxiety Symptoms among Rural, Ethnically Diverse Older Adults.

DiNapoli EA, Pierpaoli CM, Shah A, Yang X, Scogin F.

Clin Gerontol. 2017 May-Jun;40(3):181-190. doi: 10.1080/07317115.2017.1288670. Epub 2017 Feb 1.


Older adults' attitudes toward depression screening in primary care settings and exploring a brief educational pamphlet.

Shah A, Scogin F, Pierpaoli CM, Shah A.

Int J Geriatr Psychiatry. 2018 Jan;33(1):e40-e48. doi: 10.1002/gps.4713. Epub 2017 Apr 21.


Population based MRI and DTI templates of the adult ferret brain and tools for voxelwise analysis.

Hutchinson EB, Schwerin SC, Radomski KL, Sadeghi N, Jenkins J, Komlosh ME, Irfanoglu MO, Juliano SL, Pierpaoli C.

Neuroimage. 2017 May 15;152:575-589. doi: 10.1016/j.neuroimage.2017.03.009. Epub 2017 Mar 16.


Analysis of the effects of noise, DWI sampling, and value of assumed parameters in diffusion MRI models.

Hutchinson EB, Avram AV, Irfanoglu MO, Koay CG, Barnett AS, Komlosh ME, Özarslan E, Schwerin SC, Juliano SL, Pierpaoli C.

Magn Reson Med. 2017 Nov;78(5):1767-1780. doi: 10.1002/mrm.26575. Epub 2017 Jan 16.


Quantitative MRI and DTI Abnormalities During the Acute Period Following CCI in the Ferret.

Hutchinson EB, Schwerin SC, Radomski KL, Irfanoglu MO, Juliano SL, Pierpaoli CM.

Shock. 2016 Sep;46(3 Suppl 1):167-76. doi: 10.1097/SHK.0000000000000659.


Feelings of Usefulness to Others Predict Active Coping With Osteoarthritis Knee Pain.

Pierpaoli CM, Parmelee PA.

J Aging Health. 2017 Aug;29(5):826-841. doi: 10.1177/0898264316645549. Epub 2016 Apr 22.


Whole-Brain DTI Assessment of White Matter Damage in Children with Bilateral Cerebral Palsy: Evidence of Involvement beyond the Primary Target of the Anoxic Insult.

Arrigoni F, Peruzzo D, Gagliardi C, Maghini C, Colombo P, Iammarrone FS, Pierpaoli C, Triulzi F, Turconi AC.

AJNR Am J Neuroradiol. 2016 Jul;37(7):1347-53. doi: 10.3174/ajnr.A4717. Epub 2016 Mar 17.


DR-TAMAS: Diffeomorphic Registration for Tensor Accurate Alignment of Anatomical Structures.

Irfanoglu MO, Nayak A, Jenkins J, Hutchinson EB, Sadeghi N, Thomas CP, Pierpaoli C.

Neuroimage. 2016 May 15;132:439-454. doi: 10.1016/j.neuroimage.2016.02.066. Epub 2016 Feb 28.


Impact of time-of-day on brain morphometric measures derived from T1-weighted magnetic resonance imaging.

Trefler A, Sadeghi N, Thomas AG, Pierpaoli C, Baker CI, Thomas C.

Neuroimage. 2016 Jun;133:41-52. doi: 10.1016/j.neuroimage.2016.02.034. Epub 2016 Feb 26.


Tract Orientation and Angular Dispersion Deviation Indicator (TOADDI): A framework for single-subject analysis in diffusion tensor imaging.

Koay CG, Yeh PH, Ollinger JM, İrfanoğlu MO, Pierpaoli C, Basser PJ, Oakes TR, Riedy G.

Neuroimage. 2016 Feb 1;126:151-63. doi: 10.1016/j.neuroimage.2015.11.046. Epub 2015 Nov 27.


Clinical feasibility of using mean apparent propagator (MAP) MRI to characterize brain tissue microstructure.

Avram AV, Sarlls JE, Barnett AS, Özarslan E, Thomas C, Irfanoglu MO, Hutchinson E, Pierpaoli C, Basser PJ.

Neuroimage. 2016 Feb 15;127:422-434. doi: 10.1016/j.neuroimage.2015.11.027. Epub 2015 Nov 14.


Investigation of vibration-induced artifact in clinical diffusion-weighted imaging of pediatric subjects.

Berl MM, Walker L, Modi P, Irfanoglu MO, Sarlls JE, Nayak A, Pierpaoli C.

Hum Brain Mapp. 2015 Dec;36(12):4745-57. doi: 10.1002/hbm.22846. Epub 2015 Sep 9.


The DTI Challenge: Toward Standardized Evaluation of Diffusion Tensor Imaging Tractography for Neurosurgery.

Pujol S, Wells W, Pierpaoli C, Brun C, Gee J, Cheng G, Vemuri B, Commowick O, Prima S, Stamm A, Goubran M, Khan A, Peters T, Neher P, Maier-Hein KH, Shi Y, Tristan-Vega A, Veni G, Whitaker R, Styner M, Westin CF, Gouttard S, Norton I, Chauvin L, Mamata H, Gerig G, Nabavi A, Golby A, Kikinis R.

J Neuroimaging. 2015 Nov-Dec;25(6):875-82. doi: 10.1111/jon.12283. Epub 2015 Aug 11.


Functional MRI cortical activations from unilateral tactile-taste stimulations of the tongue.

Mascioli G, Berlucchi G, Pierpaoli C, Salvolini U, Barbaresi P, Fabri M, Polonara G.

Physiol Behav. 2015 Nov 1;151:221-9. doi: 10.1016/j.physbeh.2015.07.031. Epub 2015 Jul 26.


The diffusion tensor imaging (DTI) component of the NIH MRI study of normal brain development (PedsDTI).

Walker L, Chang LC, Nayak A, Irfanoglu MO, Botteron KN, McCracken J, McKinstry RC, Rivkin MJ, Wang DJ, Rumsey J, Pierpaoli C; Brain Development Cooperative Group.

Neuroimage. 2016 Jan 1;124(Pt B):1125-1130. doi: 10.1016/j.neuroimage.2015.05.083. Epub 2015 Jun 3.


Superficial white matter fiber systems impede detection of long-range cortical connections in diffusion MR tractography.

Reveley C, Seth AK, Pierpaoli C, Silva AC, Yu D, Saunders RC, Leopold DA, Ye FQ.

Proc Natl Acad Sci U S A. 2015 May 26;112(21):E2820-8. doi: 10.1073/pnas.1418198112. Epub 2015 May 11.


Diffusion MRI properties of the human uncinate fasciculus correlate with the ability to learn visual associations.

Thomas C, Avram A, Pierpaoli C, Baker C.

Cortex. 2015 Nov;72:65-78. doi: 10.1016/j.cortex.2015.01.023. Epub 2015 Feb 11.


Analysis of the contribution of experimental bias, experimental noise, and inter-subject biological variability on the assessment of developmental trajectories in diffusion MRI studies of the brain.

Sadeghi N, Nayak A, Walker L, Okan Irfanoglu M, Albert PS, Pierpaoli C; Brain Development Cooperative Group.

Neuroimage. 2015 Apr 1;109:480-92. doi: 10.1016/j.neuroimage.2014.12.084. Epub 2015 Jan 9.


Functional topography of the corpus callosum investigated by DTI and fMRI.

Fabri M, Pierpaoli C, Barbaresi P, Polonara G.

World J Radiol. 2014 Dec 28;6(12):895-906. doi: 10.4329/wjr.v6.i12.895. Review.


DR-BUDDI (Diffeomorphic Registration for Blip-Up blip-Down Diffusion Imaging) method for correcting echo planar imaging distortions.

Irfanoglu MO, Modi P, Nayak A, Hutchinson EB, Sarlls J, Pierpaoli C.

Neuroimage. 2015 Feb 1;106:284-99. doi: 10.1016/j.neuroimage.2014.11.042. Epub 2014 Nov 26.


Anatomical accuracy of brain connections derived from diffusion MRI tractography is inherently limited.

Thomas C, Ye FQ, Irfanoglu MO, Modi P, Saleem KS, Leopold DA, Pierpaoli C.

Proc Natl Acad Sci U S A. 2014 Nov 18;111(46):16574-9. doi: 10.1073/pnas.1405672111. Epub 2014 Nov 3.


DR-BUDDI: diffeomorphic registration for blip up-down diffusion imaging.

Irfanoglu MO, Modi P, Nayak A, Knutsen A, Sarlls J, Pierpaoli C.

Med Image Comput Comput Assist Interv. 2014;17(Pt 1):218-26.


Anatomical or mirror mode imitation? A behavioral approach.

Pierpaoli C, Ferrante L, Manzoni T, Fabri M.

Arch Ital Biol. 2014 Mar;152(1):20-31.


Further evidence for the topography and connectivity of the corpus callosum: an FMRI study of patients with partial callosal resection.

Polonara G, Mascioli G, Foschi N, Salvolini U, Pierpaoli C, Manzoni T, Fabri M, Barbaresi P.

J Neuroimaging. 2015 May-Jun;25(3):465-73. doi: 10.1111/jon.12136. Epub 2014 Jul 7.


Diffusion tensor histogram analysis of pediatric diffuse intrinsic pontine glioma.

Steffen-Smith EA, Sarlls JE, Pierpaoli C, Shih JH, Bent RS, Walker L, Warren KE.

Biomed Res Int. 2014;2014:647356. doi: 10.1155/2014/647356. Epub 2014 Jun 11.


Sexual challenges with aging: integrating the GES approach in an elderly couple.

McCarthy B, Pierpaoli C.

J Sex Marital Ther. 2015;41(1):72-82. doi: 10.1080/0092623X.2013.831004. Epub 2013 Dec 19.


Mean apparent propagator (MAP) MRI: a novel diffusion imaging method for mapping tissue microstructure.

Özarslan E, Koay CG, Shepherd TM, Komlosh ME, İrfanoğlu MO, Pierpaoli C, Basser PJ.

Neuroimage. 2013 Sep;78:16-32. doi: 10.1016/j.neuroimage.2013.04.016. Epub 2013 Apr 13.


Diffusion tensor imaging in young children with autism: biological effects and potential confounds.

Walker L, Gozzi M, Lenroot R, Thurm A, Behseta B, Swedo S, Pierpaoli C.

Biol Psychiatry. 2012 Dec 15;72(12):1043-51. doi: 10.1016/j.biopsych.2012.08.001. Epub 2012 Aug 18.


A framework for the analysis of phantom data in multicenter diffusion tensor imaging studies.

Walker L, Curry M, Nayak A, Lange N, Pierpaoli C; Brain Development Cooperative Group.

Hum Brain Mapp. 2013 Oct;34(10):2439-54. doi: 10.1002/hbm.22081. Epub 2012 Mar 28.


Effects of image distortions originating from susceptibility variations and concomitant fields on diffusion MRI tractography results.

Irfanoglu MO, Walker L, Sarlls J, Marenco S, Pierpaoli C.

Neuroimage. 2012 May 15;61(1):275-88. doi: 10.1016/j.neuroimage.2012.02.054. Epub 2012 Mar 3.


Informed RESTORE: A method for robust estimation of diffusion tensor from low redundancy datasets in the presence of physiological noise artifacts.

Chang LC, Walker L, Pierpaoli C.

Magn Reson Med. 2012 Nov;68(5):1654-63. doi: 10.1002/mrm.24173. Epub 2012 Jan 27.


Recollections about our 1996 JMR paper on diffusion anisotropy.

Basser P, Pierpaoli C.

J Magn Reson. 2011 Dec;213(2):571-2. doi: 10.1016/j.jmr.2011.08.023.


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