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Items: 1 to 50 of 307

1.

The Correlation of Fluorescence of Protoporphyrinogen IX and Status of Isocitrate Dehydrogenase in Gliomas.

Ohba S, Murayama K, Kuwahara K, Pareira ES, Nakae S, Nishiyama Y, Adachi K, Yamada S, Sasaki H, Yamamoto N, Abe M, Mukherjee J, Hasegawa M, Pieper RO, Hirose Y.

Neurosurgery. 2019 Dec 13. pii: nyz524. doi: 10.1093/neuros/nyz524. [Epub ahead of print]

PMID:
31833548
2.

Effects of dietary menthol-rich bioactive lipid compounds on zootechnical traits, blood variables and gastrointestinal function in growing sheep.

Patra AK, Geiger S, Schrapers KT, Braun HS, Gehlen H, Starke A, Pieper R, Cieslak A, Szumacher-Strabel M, Aschenbach JR.

J Anim Sci Biotechnol. 2019 Dec 2;10:86. doi: 10.1186/s40104-019-0398-6. eCollection 2019.

PMID:
31827785
3.

Persistent Gut Microbial Dysbiosis in Children with Acute Lymphoblastic Leukemia (ALL) During Chemotherapy.

Rajagopala SV, Singh H, Yu Y, Zabokrtsky KB, Torralba MG, Moncera KJ, Frank B, Pieper R, Sender L, Nelson KE.

Microb Ecol. 2019 Nov 21. doi: 10.1007/s00248-019-01448-x. [Epub ahead of print]

PMID:
31754744
4.

Physiologically based toxicokinetic models and in silico predicted partition coefficients to estimate tetrachlorodibenzo-p-dioxin transfer from feed into growing pigs.

Savvateeva D, Numata J, Pieper R, Schafft H, Lahrssen-Wiederholt M, Bulik S.

Arch Toxicol. 2019 Nov 14. doi: 10.1007/s00204-019-02617-0. [Epub ahead of print]

PMID:
31728592
5.

Gastro-intestinal and oral microbiome signatures associated with healthy aging.

Singh H, Torralba MG, Moncera KJ, DiLello L, Petrini J, Nelson KE, Pieper R.

Geroscience. 2019 Oct 16. doi: 10.1007/s11357-019-00098-8. [Epub ahead of print]

PMID:
31620923
6.

Aerococcus urinae and Globicatella sanguinis Persist in Polymicrobial Urethral Catheter Biofilms Examined in Longitudinal Profiles at the Proteomic Level.

Yu Y, Tsitrin T, Bekele S, Thovarai V, Torralba MG, Singh H, Wolcott R, Doerfert SN, Sizova MV, Epstein SS, Pieper R.

Biochem Insights. 2019 Sep 19;12:1178626419875089. doi: 10.1177/1178626419875089. eCollection 2019.

7.

Dietary Bioactive Lipid Compounds Rich in Menthol Alter Interactions Among Members of Ruminal Microbiota in Sheep.

Patra AK, Park T, Braun HS, Geiger S, Pieper R, Yu Z, Aschenbach JR.

Front Microbiol. 2019 Sep 4;10:2038. doi: 10.3389/fmicb.2019.02038. eCollection 2019.

8.

Stability of pyrrolizidine alkaloids from Senecio vernalis in grass silage under different ensilage conditions.

Klevenhusen F, Pieper R, Winter J, Ronczka S, Speer K.

J Sci Food Agric. 2019 Nov;99(14):6649-6654. doi: 10.1002/jsfa.9963. Epub 2019 Sep 2.

PMID:
31368529
9.

PI3K/mTOR inhibition of IDH1 mutant glioma leads to reduced 2HG production that is associated with increased survival.

Batsios G, Viswanath P, Subramani E, Najac C, Gillespie AM, Santos RD, Molloy AR, Pieper RO, Ronen SM.

Sci Rep. 2019 Jul 19;9(1):10521. doi: 10.1038/s41598-019-47021-x.

10.

Using Proteomics to Identify Inflammation During Urinary Tract Infection.

Yu Y, Pieper R.

Methods Mol Biol. 2019;2021:259-272. doi: 10.1007/978-1-4939-9601-8_22.

PMID:
31309511
11.

Detection of Neutrophil Extracellular Traps in Urine.

Yu Y, Kwon K, Pieper R.

Methods Mol Biol. 2019;2021:241-257. doi: 10.1007/978-1-4939-9601-8_21.

PMID:
31309510
12.

Mutant and Wild-Type Isocitrate Dehydrogenase 1 Share Enhancing Mechanisms Involving Distinct Tyrosine Kinase Cascades in Cancer.

Chen D, Xia S, Wang M, Lin R, Li Y, Mao H, Aguiar M, Famulare CA, Shih AH, Brennan CW, Gao X, Pan Y, Liu S, Fan J, Jin L, Song L, Zhou A, Mukherjee J, Pieper RO, Mishra A, Peng J, Arellano M, Blum WG, Lonial S, Boggon TJ, Levine RL, Chen J.

Cancer Discov. 2019 Jun;9(6):756-777. doi: 10.1158/2159-8290.CD-18-1040. Epub 2019 Mar 12.

PMID:
30862724
13.

HDAC inhibition in glioblastoma monitored by hyperpolarized 13 C MRSI.

Radoul M, Najac C, Viswanath P, Mukherjee J, Kelly M, Gillespie AM, Chaumeil MM, Eriksson P, Delos Santos R, Pieper RO, Ronen SM.

NMR Biomed. 2019 Feb;32(2):e4044. doi: 10.1002/nbm.4044. Epub 2018 Dec 18.

PMID:
30561869
14.

Actinobaculum massiliense Proteome Profiled in Polymicrobial Urethral Catheter Biofilms.

Yu Y, Tsitrin T, Singh H, Doerfert SN, Sizova MV, Epstein SS, Pieper R.

Proteomes. 2018 Dec 9;6(4). pii: E52. doi: 10.3390/proteomes6040052.

15.

High dosage of zinc modulates T-cells in a time-dependent manner within porcine gut-associated lymphatic tissue.

Kreuzer-Redmer S, Arends D, Schulte JN, Karweina D, Korkuc P, Wöltje N, Hesse D, Pieper R, Gerdts V, Zentek J, Meurens F, Brockmann GA.

Br J Nutr. 2018 Dec;120(12):1349-1358. doi: 10.1017/S0007114518002908. Epub 2018 Nov 2.

PMID:
30387407
16.

Effect of fecal microbiota transplantation route of administration on gut colonization and host response in preterm pigs.

Brunse A, Martin L, Rasmussen TS, Christensen L, Skovsted Cilieborg M, Wiese M, Khakimov B, Pieper R, Nielsen DS, Sangild PT, Thymann T.

ISME J. 2019 Mar;13(3):720-733. doi: 10.1038/s41396-018-0301-z. Epub 2018 Oct 26.

PMID:
30367124
17.

Phenotypic and genotypic drug sensitivity of Mycobacterium tuberculosis complex isolated from South Omo Zone, Southern Ethiopia.

Wondale B, Medhin G, Abebe G, Tolosa S, Mohammed T, Teklu T, Pieper R, Ameni G.

Infect Drug Resist. 2018 Sep 25;11:1581-1589. doi: 10.2147/IDR.S165088. eCollection 2018.

18.

ProteoStorm: An Ultrafast Metaproteomics Database Search Framework.

Beyter D, Lin MS, Yu Y, Pieper R, Bafna V.

Cell Syst. 2018 Oct 24;7(4):463-467.e6. doi: 10.1016/j.cels.2018.08.009. Epub 2018 Sep 26.

19.

Impact of early-life events on the susceptibility to Clostridium difficile colonisation and infection in the offspring of the pig.

Grześkowiak ŁM, Pieper R, Huynh HA, Cutting SM, Vahjen W, Zentek J.

Gut Microbes. 2019;10(2):251-259. doi: 10.1080/19490976.2018.1518554. Epub 2018 Sep 25.

20.

S-Trap, an Ultrafast Sample-Preparation Approach for Shotgun Proteomics.

HaileMariam M, Eguez RV, Singh H, Bekele S, Ameni G, Pieper R, Yu Y.

J Proteome Res. 2018 Sep 7;17(9):2917-2924. doi: 10.1021/acs.jproteome.8b00505. Epub 2018 Aug 28.

PMID:
30114372
21.

[Selenium deficiency in an organic extensive water buffalo farm].

Große R, Binici C, Pieper R, Müller KE.

Tierarztl Prax Ausg G Grosstiere Nutztiere. 2018 Jun;46(3):191-195. doi: 10.15653/TPG-170632. Epub 2018 Jun 14. German.

PMID:
29902819
22.

Neurofibromin knockdown in glioma cell lines is associated with changes in cytokine and chemokine secretion in vitro.

Wood MD, Mukherjee J, Pieper RO.

Sci Rep. 2018 Apr 11;8(1):5805. doi: 10.1038/s41598-018-24046-2.

23.

Mutant IDH1 gliomas downregulate phosphocholine and phosphoethanolamine synthesis in a 2-hydroxyglutarate-dependent manner.

Viswanath P, Radoul M, Izquierdo-Garcia JL, Luchman HA, Gregory Cairncross J, Pieper RO, Phillips JJ, Ronen SM.

Cancer Metab. 2018 Apr 3;6:3. doi: 10.1186/s40170-018-0178-3. eCollection 2018.

24.

Mutant IDH1 Cooperates with ATRX Loss to Drive the Alternative Lengthening of Telomere Phenotype in Glioma.

Mukherjee J, Johannessen TC, Ohba S, Chow TT, Jones L, Pandita A, Pieper RO.

Cancer Res. 2018 Jun 1;78(11):2966-2977. doi: 10.1158/0008-5472.CAN-17-2269. Epub 2018 Mar 15.

25.

Microbial metagenome of urinary tract infection.

Moustafa A, Li W, Singh H, Moncera KJ, Torralba MG, Yu Y, Manuel O, Biggs W, Venter JC, Nelson KE, Pieper R, Telenti A.

Sci Rep. 2018 Mar 12;8(1):4333. doi: 10.1038/s41598-018-22660-8.

26.

Latent tuberculosis infection and associated risk indicators in pastoral communities in southern Ethiopia: a community based cross-sectional study.

Teklu T, Legesse M, Medhin G, Zewude A, Chanyalew M, Zewdie M, Wondale B, Haile-Mariam M, Pieper R, Ameni G.

BMC Public Health. 2018 Feb 17;18(1):266. doi: 10.1186/s12889-018-5149-7.

27.

Influence of differently processed yeast (Kluyveromyces fragilis) on feed intake and gut physiology in weaned pigs.

Keimer B, Kröger S, Röhe I, Pieper R, Simon A, Zentek J.

J Anim Sci. 2018 Feb 15;96(1):194-205. doi: 10.1093/jas/skx031.

28.

High dietary zinc feeding promotes persistence of multi-resistant E. coli in the swine gut.

Ciesinski L, Guenther S, Pieper R, Kalisch M, Bednorz C, Wieler LH.

PLoS One. 2018 Jan 26;13(1):e0191660. doi: 10.1371/journal.pone.0191660. eCollection 2018.

29.

2-Hydroxyglutarate-Mediated Autophagy of the Endoplasmic Reticulum Leads to an Unusual Downregulation of Phospholipid Biosynthesis in Mutant IDH1 Gliomas.

Viswanath P, Radoul M, Izquierdo-Garcia JL, Ong WQ, Luchman HA, Cairncross JG, Huang B, Pieper RO, Phillips JJ, Ronen SM.

Cancer Res. 2018 May 1;78(9):2290-2304. doi: 10.1158/0008-5472.CAN-17-2926. Epub 2018 Jan 22.

30.

Potential Immunological Biomarkers for Detection of Mycobacterium tuberculosis Infection in a Setting Where M. tuberculosis Is Endemic, Ethiopia.

Teklu T, Kwon K, Wondale B, HaileMariam M, Zewude A, Medhin G, Legesse M, Pieper R, Ameni G.

Infect Immun. 2018 Mar 22;86(4). pii: e00759-17. doi: 10.1128/IAI.00759-17. Print 2018 Apr.

31.

Mechanisms of action of Coxiella burnetii effectors inferred from host-pathogen protein interactions.

Wallqvist A, Wang H, Zavaljevski N, Memišević V, Kwon K, Pieper R, Rajagopala SV, Reifman J.

PLoS One. 2017 Nov 27;12(11):e0188071. doi: 10.1371/journal.pone.0188071. eCollection 2017. Erratum in: PLoS One. 2018 Apr 20;13(4):e0196373.

32.

Formula Feeding Predisposes Neonatal Piglets to Clostridium difficile Gut Infection.

Grzeskowiak L, Martínez-Vallespín B, Dadi TH, Radloff J, Amasheh S, Heinsen FA, Franke A, Reinert K, Vahjen W, Zentek J, Pieper R.

J Infect Dis. 2018 Apr 11;217(9):1442-1452. doi: 10.1093/infdis/jix567.

PMID:
29099941
33.

Characterization of Inflammasome Components in Pig Intestine and Analysis of the Influence of Probiotic Enterococcus Faecium during an Escherichia Coli Challenge.

Kern M, Aschenbach JR, Tedin K, Pieper R, Loss H, Lodemann U.

Immunol Invest. 2017 Oct;46(7):742-757. doi: 10.1080/08820139.2017.1360341.

PMID:
28872975
34.

Type 1 Diabetes: Urinary Proteomics and Protein Network Analysis Support Perturbation of Lysosomal Function.

Singh H, Yu Y, Suh MJ, Torralba MG, Stenzel RD, Tovchigrechko A, Thovarai V, Harkins DM, Rajagopala SV, Osborne W, Cogen FR, Kaplowitz PB, Nelson KE, Madupu R, Pieper R.

Theranostics. 2017 Jul 7;7(10):2704-2717. doi: 10.7150/thno.19679. eCollection 2017.

35.

Nontuberculosis mycobacteria are the major causes of tuberculosis like lesions in cattle slaughtered at Bahir Dar Abattoir, northwestern Ethiopia.

Nuru A, Zewude A, Mohammed T, Wondale B, Teshome L, Getahun M, Mamo G, Medhin G, Pieper R, Ameni G.

BMC Vet Res. 2017 Aug 15;13(1):237. doi: 10.1186/s12917-017-1168-3.

36.

Quick 96FASP for high throughput quantitative proteome analysis.

Yu Y, Bekele S, Pieper R.

J Proteomics. 2017 Aug 23;166:1-7. doi: 10.1016/j.jprot.2017.06.019. Epub 2017 Jun 29.

37.

Pathogen-Reactive T Helper Cell Analysis in the Pig.

Ebner F, Schwiertz P, Steinfelder S, Pieper R, Zentek J, Schütze N, Baums CG, Alber G, Geldhof P, Hartmann S.

Front Immunol. 2017 May 17;8:565. doi: 10.3389/fimmu.2017.00565. eCollection 2017.

38.

Porcine milk induces a strengthening of barrier function in porcine jejunal epithelium in vitro.

Radloff J, Zakrzewski SS, Pieper R, Markov AG, Amasheh S.

Ann N Y Acad Sci. 2017 Jun;1397(1):110-118. doi: 10.1111/nyas.13340. Epub 2017 Apr 26.

PMID:
28445594
39.

Mycobacterium tuberculosis in central Ethiopia: drug sensitivity patterns and association with genotype.

Bedewi Z, Mekonnen Y, Worku A, Medhin G, Zewde A, Yimer G, Pieper R, Ameni G.

New Microbes New Infect. 2017 Mar 3;17:69-74. doi: 10.1016/j.nmni.2017.02.003. eCollection 2017 May.

40.

Zinc treatment is efficient against Escherichia coli α-haemolysin-induced intestinal leakage in mice.

Wiegand S, Zakrzewski SS, Eichner M, Schulz E, Günzel D, Pieper R, Rosenthal R, Barmeyer C, Bleich A, Dobrindt U, Schulzke JD, Bücker R.

Sci Rep. 2017 Mar 31;7:45649. doi: 10.1038/srep45649.

41.

Molecular typing of Mycobacterium tuberculosis complex isolated from pulmonary tuberculosis patients in central Ethiopia.

Bedewi Z, Worku A, Mekonnen Y, Yimer G, Medhin G, Mamo G, Pieper R, Ameni G.

BMC Infect Dis. 2017 Mar 1;17(1):184. doi: 10.1186/s12879-017-2267-2.

42.

Characterization of Early-Phase Neutrophil Extracellular Traps in Urinary Tract Infections.

Yu Y, Kwon K, Tsitrin T, Bekele S, Sikorski P, Nelson KE, Pieper R.

PLoS Pathog. 2017 Jan 27;13(1):e1006151. doi: 10.1371/journal.ppat.1006151. eCollection 2017 Jan.

43.

Preliminary investigation of the transmission of tuberculosis between farmers and their cattle in smallholder farms in northwestern Ethiopia: a cross-sectional study.

Nuru A, Mamo G, Zewude A, Mulat Y, Yitayew G, Admasu A, Medhin G, Pieper R, Ameni G.

BMC Res Notes. 2017 Jan 7;10(1):31. doi: 10.1186/s13104-016-2349-z.

44.

Comprehensive Metaproteomic Analyses of Urine in the Presence and Absence of Neutrophil-Associated Inflammation in the Urinary Tract.

Yu Y, Sikorski P, Smith M, Bowman-Gholston C, Cacciabeve N, Nelson KE, Pieper R.

Theranostics. 2017 Jan 1;7(2):238-252. doi: 10.7150/thno.16086. eCollection 2017.

45.

Effects of Ex Vivo Infection with ETEC on Jejunal Barrier Properties and Cytokine Expression in Probiotic-Supplemented Pigs.

Lodemann U, Amasheh S, Radloff J, Kern M, Bethe A, Wieler LH, Pieper R, Zentek J, Aschenbach JR.

Dig Dis Sci. 2017 Apr;62(4):922-933. doi: 10.1007/s10620-016-4413-x. Epub 2016 Dec 19.

PMID:
27995406
46.

Evaluation of the GenoType MTBDRplus assay for detection of rifampicin- and isoniazid-resistant Mycobacterium tuberculosis isolates in central Ethiopia.

Bedewi Omer Z, Mekonnen Y, Worku A, Zewde A, Medhin G, Mohammed T, Pieper R, Ameni G.

Int J Mycobacteriol. 2016 Dec;5(4):475-481. doi: 10.1016/j.ijmyco.2016.06.005. Epub 2016 Jun 27.

47.

Intestinal lactose and mineral concentration affect the microbial ecophysiology along the gastrointestinal tract of formula-fed neonatal piglets.

Pieper R, Vahjen W, Zentek J.

J Anim Sci. 2016 Sep;94(9):3786-3795. doi: 10.2527/jas.2016-0459.

PMID:
27898903
48.

Mutant IDH1 Expression Drives TERT Promoter Reactivation as Part of the Cellular Transformation Process.

Ohba S, Mukherjee J, Johannessen TC, Mancini A, Chow TT, Wood M, Jones L, Mazor T, Marshall RE, Viswanath P, Walsh KM, Perry A, Bell RJ, Phillips JJ, Costello JF, Ronen SM, Pieper RO.

Cancer Res. 2016 Nov 15;76(22):6680-6689. doi: 10.1158/0008-5472.CAN-16-0696. Epub 2016 Oct 6.

49.

UBE2S, a novel substrate of Akt1, associates with Ku70 and regulates DNA repair and glioblastoma multiforme resistance to chemotherapy.

Hu L, Li X, Liu Q, Xu J, Ge H, Wang Z, Wang H, Wang Z, Shi C, Xu X, Huang J, Lin Z, Pieper RO, Weng C.

Oncogene. 2017 Feb 23;36(8):1145-1156. doi: 10.1038/onc.2016.281. Epub 2016 Sep 5.

PMID:
27593939
50.

Health relevance of intestinal protein fermentation in young pigs.

Pieper R, Villodre Tudela C, Taciak M, Bindelle J, Pérez JF, Zentek J.

Anim Health Res Rev. 2016 Dec;17(2):137-147. doi: 10.1017/S1466252316000141. Epub 2016 Aug 30.

PMID:
27572670

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