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Best matches for Piškur J[au]:

Why, when, and how did yeast evolve alcoholic fermentation? Dashko S et al. FEMS Yeast Res. (2014)

Coevolution with bacteria drives the evolution of aerobic fermentation in Lachancea kluyveri. Zhou N et al. PLoS One. (2017)

Parallel Evolution of Chromatin Structure Underlying Metabolic Adaptation. Cheng J et al. Mol Biol Evol. (2017)

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Items: 1 to 50 of 155

1.

Understand the genomic diversity and evolution of fungal pathogen Candida glabrata by genome-wide analysis of genetic variations.

Guo X, Zhang R, Li Y, Wang Z, Ishchuk OP, Ahmad KM, Wee J, Piskur J, Shapiro JA, Gu Z.

Methods. 2019 May 3. pii: S1046-2023(18)30469-9. doi: 10.1016/j.ymeth.2019.05.002. [Epub ahead of print]

PMID:
31059831
2.

Improvement of thermotolerance in Lachancea thermotolerans using a bacterial selection pressure.

Zhou N, Ishchuk OP, Knecht W, Compagno C, Piškur J.

J Ind Microbiol Biotechnol. 2019 Feb;46(2):133-145. doi: 10.1007/s10295-018-2107-4. Epub 2018 Nov 28.

3.

Genome dynamics and evolution in yeasts: A long-term yeast-bacteria competition experiment.

Zhou N, Katz M, Knecht W, Compagno C, Piškur J.

PLoS One. 2018 Apr 6;13(4):e0194911. doi: 10.1371/journal.pone.0194911. eCollection 2018.

4.

Chemical signaling and insect attraction is a conserved trait in yeasts.

Becher PG, Hagman A, Verschut V, Chakraborty A, Rozpędowska E, Lebreton S, Bengtsson M, Flick G, Witzgall P, Piškur J.

Ecol Evol. 2018 Feb 14;8(5):2962-2974. doi: 10.1002/ece3.3905. eCollection 2018 Mar.

5.

Parallel Evolution of Chromatin Structure Underlying Metabolic Adaptation.

Cheng J, Guo X, Cai P, Cheng X, Piškur J, Ma Y, Jiang H, Gu Z.

Mol Biol Evol. 2017 Nov 1;34(11):2870-2878. doi: 10.1093/molbev/msx220.

PMID:
28961859
6.

Yeast-bacteria competition induced new metabolic traits through large-scale genomic rearrangements in Lachancea kluyveri.

Zhou N, Bottagisi S, Katz M, Schacherer J, Friedrich A, Gojkovic Z, Swamy KBS, Knecht W, Compagno C, Piškur J.

FEMS Yeast Res. 2017 Sep 1;17(6). doi: 10.1093/femsyr/fox060.

PMID:
28910985
7.

Kazachstania gamospora and Wickerhamomyces subpelliculosus: Two alternative baker's yeasts in the modern bakery.

Zhou N, Schifferdecker AJ, Gamero A, Compagno C, Boekhout T, Piškur J, Knecht W.

Int J Food Microbiol. 2017 Jun 5;250:45-58. doi: 10.1016/j.ijfoodmicro.2017.03.013. Epub 2017 Mar 22.

PMID:
28365494
8.

Coevolution with bacteria drives the evolution of aerobic fermentation in Lachancea kluyveri.

Zhou N, Swamy KB, Leu JY, McDonald MJ, Galafassi S, Compagno C, Piškur J.

PLoS One. 2017 Mar 10;12(3):e0173318. doi: 10.1371/journal.pone.0173318. eCollection 2017.

9.

Gene duplications and losses among vertebrate deoxyribonucleoside kinases of the non-TK1 Family.

Mutahir Z, Christiansen LS, Clausen AR, Berchtold MW, Gojkovic Z, Munch-Petersen B, Knecht W, Piškur J.

Nucleosides Nucleotides Nucleic Acids. 2016 Dec;35(10-12):677-690.

PMID:
27906638
10.

Novel Centromeric Loci of the Wine and Beer Yeast Dekkera bruxellensis CEN1 and CEN2.

Ishchuk OP, Vojvoda Zeljko T, Schifferdecker AJ, Mebrahtu Wisén S, Hagström ÅK, Rozpędowska E, Rørdam Andersen M, Hellborg L, Ling Z, Sibirny AA, Piškur J.

PLoS One. 2016 Aug 25;11(8):e0161741. doi: 10.1371/journal.pone.0161741. eCollection 2016.

11.

Changes in the Relative Abundance of Two Saccharomyces Species from Oak Forests to Wine Fermentations.

Dashko S, Liu P, Volk H, Butinar L, Piškur J, Fay JC.

Front Microbiol. 2016 Feb 24;7:215. doi: 10.3389/fmicb.2016.00215. eCollection 2016.

12.

Erratum to: Alcohol dehydrogenase gene ADH3 activates glucose alcoholic fermentation in genetically engineered Dekkera bruxellensis yeast.

Schifferdecker AJ, Siurkus J, Andersen MR, Joerck-Ramberg D, Ling Z, Zhou N, Blevins JE, Sibirny AA, Piškur J, Ishchuk OP.

Appl Microbiol Biotechnol. 2016 Apr;100(7):3233. doi: 10.1007/s00253-016-7349-3. No abstract available.

13.

Alcohol dehydrogenase gene ADH3 activates glucose alcoholic fermentation in genetically engineered Dekkera bruxellensis yeast.

Schifferdecker AJ, Siurkus J, Andersen MR, Joerck-Ramberg D, Ling Z, Zhou N, Blevins JE, Sibirny AA, Piškur J, Ishchuk OP.

Appl Microbiol Biotechnol. 2016 Apr;100(7):3219-31. doi: 10.1007/s00253-015-7266-x. Epub 2016 Jan 8. Erratum in: Appl Microbiol Biotechnol. 2016 Apr;100(7):3233.

14.

New Variants of Tomato Thymidine Kinase 1 Selected for Increased Sensitivity of E. coli KY895 towards Azidothymidine.

Christiansen LS, Egeblad L, Munch-Petersen B, Piškur J, Knecht W.

Cancers (Basel). 2015 Jun 8;7(2):966-80. doi: 10.3390/cancers7020819.

15.

Use of non-conventional yeast improves the wine aroma profile of Ribolla Gialla.

Dashko S, Zhou N, Tinta T, Sivilotti P, Lemut MS, Trost K, Gamero A, Boekhout T, Butinar L, Vrhovsek U, Piskur J.

J Ind Microbiol Biotechnol. 2015 Jul;42(7):997-1010. doi: 10.1007/s10295-015-1620-y. Epub 2015 Apr 23.

PMID:
25903098
16.

Galactose utilization sheds new light on sugar metabolism in the sequenced strain Dekkera bruxellensis CBS 2499.

Moktaduzzaman M, Galafassi S, Capusoni C, Vigentini I, Ling Z, Piškur J, Compagno C.

FEMS Yeast Res. 2015 Mar;15(2). pii: fou009. doi: 10.1093/femsyr/fou009.

17.

A study on the fundamental mechanism and the evolutionary driving forces behind aerobic fermentation in yeast.

Hagman A, Piškur J.

PLoS One. 2015 Jan 24;10(1):e0116942. doi: 10.1371/journal.pone.0116942. eCollection 2015.

18.

Tomato thymidine kinase-based suicide gene therapy for malignant glioma--an alternative for Herpes Simplex virus-1 thymidine kinase.

Stedt H, Samaranayake H, Kurkipuro J, Wirth G, Christiansen LS, Vuorio T, Määttä AM, Piškur J, Ylä-Herttuala S.

Cancer Gene Ther. 2015 Apr;22(3):130-7. doi: 10.1038/cgt.2014.76. Epub 2015 Jan 23.

PMID:
25613481
19.

Analysis of the yeast short-term Crabtree effect and its origin.

Hagman A, Säll T, Piškur J.

FEBS J. 2014 Nov;281(21):4805-14. doi: 10.1111/febs.13019. Epub 2014 Sep 26.

20.

Plants salvage deoxyribonucleosides in mitochondria.

Clausen AR, Mutahir Z, Munch-Petersen B, Piškur J.

Nucleosides Nucleotides Nucleic Acids. 2014;33(4-6):291-5. doi: 10.1080/15257770.2013.853782.

PMID:
24940682
21.

Tomato thymidine kinase is subject to inefficient TTP feedback regulation.

Larsen NB, Munch-Petersen B, Piškur J.

Nucleosides Nucleotides Nucleic Acids. 2014;33(4-6):287-90. doi: 10.1080/15257770.2013.853781.

PMID:
24940681
22.

The wine and beer yeast Dekkera bruxellensis.

Schifferdecker AJ, Dashko S, Ishchuk OP, Piškur J.

Yeast. 2014 Sep;31(9):323-32. doi: 10.1002/yea.3023. Epub 2014 Jul 7. Review.

23.

Why, when, and how did yeast evolve alcoholic fermentation?

Dashko S, Zhou N, Compagno C, Piškur J.

FEMS Yeast Res. 2014 Sep;14(6):826-32. doi: 10.1111/1567-1364.12161. Epub 2014 Jun 9. Review.

24.

Genome structure and dynamics of the yeast pathogen Candida glabrata.

Ahmad KM, Kokošar J, Guo X, Gu Z, Ishchuk OP, Piškur J.

FEMS Yeast Res. 2014 Jun;14(4):529-35. doi: 10.1111/1567-1364.12145. Epub 2014 Mar 10. Review.

25.

The phylogenetic distribution and evolution of enzymes within the thymidine kinase 2-like gene family in metazoa.

Konrad A, Lai J, Mutahir Z, Piškur J, Liberles DA.

J Mol Evol. 2014 Apr;78(3-4):202-16. doi: 10.1007/s00239-014-9611-6. Epub 2014 Feb 6.

PMID:
24500774
26.

Global expression analysis of the yeast Lachancea (Saccharomyces) kluyveri reveals new URC genes involved in pyrimidine catabolism.

Andersson Rasmussen A, Kandasamy D, Beck H, Crosby SD, Björnberg O, Schnackerz KD, Piškur J.

Eukaryot Cell. 2014 Jan;13(1):31-42. doi: 10.1128/EC.00202-13. Epub 2013 Nov 1.

27.

Osmotic stress response in the wine yeast Dekkera bruxellensis.

Galafassi S, Toscano M, Vigentini I, Piškur J, Compagno C.

Food Microbiol. 2013 Dec;36(2):316-9. doi: 10.1016/j.fm.2013.06.011. Epub 2013 Jul 6.

PMID:
24010612
28.

Yeast "make-accumulate-consume" life strategy evolved as a multi-step process that predates the whole genome duplication.

Hagman A, Säll T, Compagno C, Piskur J.

PLoS One. 2013 Jul 15;8(7):e68734. doi: 10.1371/journal.pone.0068734. Print 2013.

29.

Small chromosomes among Danish Candida glabrata isolates originated through different mechanisms.

Ahmad KM, Ishchuk OP, Hellborg L, Jørgensen G, Skvarc M, Stenderup J, Jørck-Ramberg D, Polakova S, Piškur J.

Antonie Van Leeuwenhoek. 2013 Jul;104(1):111-22. doi: 10.1007/s10482-013-9931-3. Epub 2013 May 14. Erratum in: Antonie Van Leeuwenhoek. 2013 Aug;104(2):281-2.

30.

Thymidine kinase 1 regulatory fine-tuning through tetramer formation.

Mutahir Z, Clausen AR, Andersson KM, Wisen SM, Munch-Petersen B, Piškur J.

FEBS J. 2013 Mar;280(6):1531-41. doi: 10.1111/febs.12154. Epub 2013 Feb 25.

31.

The evolution of catalytic residues and enzyme mechanism within the bacterial nucleoside phosphorylase superfamily 1.

Konrad A, Piškur J, Liberles DA.

Gene. 2012 Dec 1;510(2):154-61. doi: 10.1016/j.gene.2012.08.046. Epub 2012 Sep 3.

PMID:
22967797
32.

Two thymidine kinases and one multisubstrate deoxyribonucleoside kinase salvage DNA precursors in Arabidopsis thaliana.

Clausen AR, Girandon L, Ali A, Knecht W, Rozpedowska E, Sandrini MP, Andreasson E, Munch-Petersen B, Piškur J.

FEBS J. 2012 Oct;279(20):3889-97. doi: 10.1111/j.1742-4658.2012.08747.x. Epub 2012 Sep 11.

33.

"This is not an apple"-yeast mutualism in codling moth.

Witzgall P, Proffit M, Rozpedowska E, Becher PG, Andreadis S, Coracini M, Lindblom TU, Ream LJ, Hagman A, Bengtsson M, Kurtzman CP, Piskur J, Knight A.

J Chem Ecol. 2012 Aug;38(8):949-57. doi: 10.1007/s10886-012-0158-y. Epub 2012 Jul 14.

PMID:
22797850
34.

The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties.

Piškur J, Ling Z, Marcet-Houben M, Ishchuk OP, Aerts A, LaButti K, Copeland A, Lindquist E, Barry K, Compagno C, Bisson L, Grigoriev IV, Gabaldón T, Phister T.

Int J Food Microbiol. 2012 Jul 2;157(2):202-9. doi: 10.1016/j.ijfoodmicro.2012.05.008. Epub 2012 May 14.

PMID:
22663979
35.

Intraspecific variations of Dekkera/Brettanomyces bruxellensis genome studied by capillary electrophoresis separation of the intron splice site profiles.

Vigentini I, De Lorenzis G, Picozzi C, Imazio S, Merico A, Galafassi S, Piškur J, Foschino R.

Int J Food Microbiol. 2012 Jun 15;157(1):6-15. doi: 10.1016/j.ijfoodmicro.2012.02.017. Epub 2012 Mar 3.

PMID:
22607811
36.

Deoxyribonucleoside kinases in two aquatic bacteria with high specificity for thymidine and deoxyadenosine.

Tinta T, Christiansen LS, Konrad A, Liberles DA, Turk V, Munch-Petersen B, Piškur J, Clausen AR.

FEMS Microbiol Lett. 2012 Jun;331(2):120-7. doi: 10.1111/j.1574-6968.2012.02565.x. Epub 2012 Apr 25.

37.

A new expression vector for production of enzymes in the yeast Saccharomyces (Lachancea) kluyveri.

Rasmussen A, Lv Y, Schnackerz KD, Piškur J.

Nucleosides Nucleotides Nucleic Acids. 2011 Dec;30(12):1227-32. doi: 10.1080/15257770.2011.603713.

PMID:
22132979
38.

Characterization of oligomeric and kinetic properties of tomato thymidine kinase 1.

Mutahir Z, Larsen NB, Christiansen LS, Andersson KM, Rico R, Wisen SM, Clausen AR, Munch-Petersen B, Piškur J.

Nucleosides Nucleotides Nucleic Acids. 2011 Dec;30(12):1223-6. doi: 10.1080/15257770.2011.597629.

PMID:
22132978
39.

The global distribution and evolution of deoxyribonucleoside kinases in bacteria.

Konrad A, Yarunova E, Tinta T, Piškur J, Liberles DA.

Gene. 2012 Jan 15;492(1):117-20. doi: 10.1016/j.gene.2011.10.039. Epub 2011 Oct 26.

PMID:
22057012
40.

The crystal structure of Streptococcus pyogenes uridine phosphorylase reveals a distinct subfamily of nucleoside phosphorylases.

Tran TH, Christoffersen S, Allan PW, Parker WB, Piskur J, Serra I, Terreni M, Ealick SE.

Biochemistry. 2011 Aug 2;50(30):6549-58. doi: 10.1021/bi200707z. Epub 2011 Jul 8.

41.

Parallel evolution of the make-accumulate-consume strategy in Saccharomyces and Dekkera yeasts.

Rozpędowska E, Hellborg L, Ishchuk OP, Orhan F, Galafassi S, Merico A, Woolfit M, Compagno C, Piskur J.

Nat Commun. 2011;2:302. doi: 10.1038/ncomms1305.

42.

Candida albicans--a pre-whole genome duplication yeast--is predominantly aerobic and a poor ethanol producer.

Rozpędowska E, Galafassi S, Johansson L, Hagman A, Piškur J, Compagno C.

FEMS Yeast Res. 2011 May;11(3):285-91. doi: 10.1111/j.1567-1364.2010.00715.x. Epub 2011 Feb 2.

43.

Dekkera/Brettanomyces yeasts for ethanol production from renewable sources under oxygen-limited and low-pH conditions.

Galafassi S, Merico A, Pizza F, Hellborg L, Molinari F, Piškur J, Compagno C.

J Ind Microbiol Biotechnol. 2011 Aug;38(8):1079-88. doi: 10.1007/s10295-010-0885-4. Epub 2010 Oct 10.

PMID:
20936422
44.

Nucleoside phosphorylases from clostridium perfringens in the synthesis of 2',3'-dideoxyinosine.

Christoffersen S, Serra I, Terreni M, Piskur J.

Nucleosides Nucleotides Nucleic Acids. 2010 Jun;29(4-6):445-8. doi: 10.1080/15257771003741422.

PMID:
20544534
45.

Ribosylurea accumulates in yeast urc4 mutants.

Björnberg O, Vodnala M, Domkin V, Hofer A, Rasmussen A, Andersen G, Piskur J.

Nucleosides Nucleotides Nucleic Acids. 2010 Jun;29(4-6):433-7. doi: 10.1080/15257771003741265.

PMID:
20544532
46.

Pasteurella multocida thymidine kinase 1 efficiently activates pyrimidine nucleoside analogs.

Clausen AR, Al Meani SA, Piskur J.

Nucleosides Nucleotides Nucleic Acids. 2010 Jun;29(4-6):359-62. doi: 10.1080/15257771003729716.

PMID:
20544520
47.

Mitochondrial genome from the facultative anaerobe and petite-positive yeast Dekkera bruxellensis contains the NADH dehydrogenase subunit genes.

Procházka E, Poláková S, Piskur J, Sulo P.

FEMS Yeast Res. 2010 Aug 1;10(5):545-57. doi: 10.1111/j.1567-1364.2010.00644.x. Epub 2010 May 10.

48.

Elucidation of the sex-pheromone biosynthesis producing 5,7-dodecadienes in Dendrolimus punctatus (Lepidoptera: Lasiocampidae) reveals Delta 11- and Delta 9-desaturases with unusual catalytic properties.

Liénard MA, Lassance JM, Wang HL, Zhao CH, Piskur J, Johansson T, Löfstedt C.

Insect Biochem Mol Biol. 2010 Jun;40(6):440-52. doi: 10.1016/j.ibmb.2010.04.003. Epub 2010 Apr 18.

PMID:
20403437
49.

Bacterial deoxyribonucleoside kinases are poor suicide genes in mammalian cells.

Hébrard C, Cros-Perrial E, Clausen AR, Dumontet C, Piskur J, Jordheim LP.

Nucleosides Nucleotides Nucleic Acids. 2009 Nov;28(11):1068-75. doi: 10.1080/15257770903368393.

PMID:
20183574
50.

Plant thymidine kinase 1: a novel efficient suicide gene for malignant glioma therapy.

Khan Z, Knecht W, Willer M, Rozpedowska E, Kristoffersen P, Clausen AR, Munch-Petersen B, Almqvist PM, Gojkovic Z, Piskur J, Ekström TJ.

Neuro Oncol. 2010 Jun;12(6):549-58. doi: 10.1093/neuonc/nop067. Epub 2010 Feb 13.

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