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Risk of brainstem necrosis in pediatric patients with central nervous system malignancies after pencil beam scanning proton therapy.

Vogel J, Grewal A, O'Reilly S, Lustig R, Kurtz G, Minturn JE, Shah AC, Waanders AJ, Belasco JB, Cole KA, Fisher MJ, Phillips PC, Balamuth NJ, Storm PB, Hill-Kayser CE.

Acta Oncol. 2019 Sep 12:1-5. doi: 10.1080/0284186X.2019.1659996. [Epub ahead of print]


Males, Outcrossing, and Sexual Selection in Caenorhabditis Nematodes.

Cutter AD, Morran LT, Phillips PC.

Genetics. 2019 Sep;213(1):27-57. doi: 10.1534/genetics.119.300244.


The Stress-Chip: A microfluidic platform for stress analysis in Caenorhabditis elegans.

Banse SA, Blue BW, Robinson KJ, Jarrett CM, Phillips PC.

PLoS One. 2019 May 1;14(5):e0216283. doi: 10.1371/journal.pone.0216283. eCollection 2019.


A large close relative of C. elegans is slow-developing but not long-lived.

Woodruff GC, Johnson E, Phillips PC.

BMC Evol Biol. 2019 Mar 11;19(1):74. doi: 10.1186/s12862-019-1388-1.


Environmental and Evolutionary Drivers of the Modular Gene Regulatory Network Underlying Phenotypic Plasticity for Stress Resistance in the Nematode Caenorhabditis remanei.

Sikkink KL, Reynolds RM, Ituarte CM, Cresko WA, Phillips PC.

G3 (Bethesda). 2019 Mar 7;9(3):969-982. doi: 10.1534/g3.118.200017.


Dramatic evolution of body length due to postembryonic changes in cell size in a newly discovered close relative of Caenorhabditis elegans.

Woodruff GC, Willis JH, Phillips PC.

Evol Lett. 2018 Jul 16;2(4):427-441. doi: 10.1002/evl3.67. eCollection 2018 Aug.


Proteomic and evolutionary analyses of sperm activation identify uncharacterized genes in Caenorhabditis nematodes.

Kasimatis KR, Moerdyk-Schauwecker MJ, Timmermeyer N, Phillips PC.

BMC Genomics. 2018 Aug 7;19(1):593. doi: 10.1186/s12864-018-4980-7.


Auxin-Mediated Sterility Induction System for Longevity and Mating Studies in Caenorhabditis elegans.

Kasimatis KR, Moerdyk-Schauwecker MJ, Phillips PC.

G3 (Bethesda). 2018 Jul 31;8(8):2655-2662. doi: 10.1534/g3.118.200278.


A prospective study of family predictors of health-related quality of life in pediatric brain tumor survivors.

Quast LF, Phillips PC, Li Y, Kazak AE, Barakat LP, Hocking MC.

Pediatr Blood Cancer. 2018 Jun;65(6):e26976. doi: 10.1002/pbc.26976. Epub 2018 Jan 19.


Monitoring of arrhythmia and sudden death in a hemodialysis population: The CRASH-ILR Study.

Roberts PR, Zachariah D, Morgan JM, Yue AM, Greenwood EF, Phillips PC, Kalra PA, Green D, Lewis RJ, Kalra PR.

PLoS One. 2017 Dec 14;12(12):e0188713. doi: 10.1371/journal.pone.0188713. eCollection 2017.


Quantifying male and female pheromone-based mate choice in Caenorhabditis nematodes using a novel microfluidic technique.

Borne F, Kasimatis KR, Phillips PC.

PLoS One. 2017 Dec 13;12(12):e0189679. doi: 10.1371/journal.pone.0189679. eCollection 2017.


Pediatric Brain Tumors.

Dang M, Phillips PC.

Continuum (Minneap Minn). 2017 Dec;23(6, Neuro-oncology):1727-1757. doi: 10.1212/CON.0000000000000545. Review.


Rapid Gene Family Evolution of a Nematode Sperm Protein Despite Sequence Hyper-conservation.

Kasimatis KR, Phillips PC.

G3 (Bethesda). 2018 Jan 4;8(1):353-362. doi: 10.1534/g3.117.300281.


Genomic Signatures of Sexual Conflict.

Kasimatis KR, Nelson TC, Phillips PC.

J Hered. 2017 Oct 30;108(7):780-790. doi: 10.1093/jhered/esx080.


Experimental Evolution with Caenorhabditis Nematodes.

Teotónio H, Estes S, Phillips PC, Baer CF.

Genetics. 2017 Jun;206(2):691-716. doi: 10.1534/genetics.115.186288. Review.


Impact of genetic background and experimental reproducibility on identifying chemical compounds with robust longevity effects.

Lucanic M, Plummer WT, Chen E, Harke J, Foulger AC, Onken B, Coleman-Hulbert AL, Dumas KJ, Guo S, Johnson E, Bhaumik D, Xue J, Crist AB, Presley MP, Harinath G, Sedore CA, Chamoli M, Kamat S, Chen MK, Angeli S, Chang C, Willis JH, Edgar D, Royal MA, Chao EA, Patel S, Garrett T, Ibanez-Ventoso C, Hope J, Kish JL, Guo M, Lithgow GJ, Driscoll M, Phillips PC.

Nat Commun. 2017 Feb 21;8:14256. doi: 10.1038/ncomms14256.


Metagenome-Assembled Draft Genome Sequence of a Novel Microbial Stenotrophomonas maltophilia Strain Isolated from Caenorhabditisremanei Tissue.

Fierst JL, Murdock DA, Thanthiriwatte C, Willis JH, Phillips PC.

Genome Announc. 2017 Feb 16;5(7). pii: e01646-16. doi: 10.1128/genomeA.01646-16.


Coevolutionary interactions with parasites constrain the spread of self-fertilization into outcrossing host populations.

Slowinski SP, Morran LT, Parrish RC 2nd, Cui ER, Bhattacharya A, Lively CM, Phillips PC.

Evolution. 2016 Nov;70(11):2632-2639. doi: 10.1111/evo.13048. Epub 2016 Sep 15.


Neuroplastic Response After Radiation Therapy for Pediatric Brain Tumors: A Pilot Study.

Armstrong CL, Fisher MJ, Li Y, Lustig RA, Belasco JB, Minturn JE, Hill-Kayser CE, Batra S, Phillips PC.

Int J Radiat Oncol Biol Phys. 2016 Jul 1;95(3):991-998. doi: 10.1016/j.ijrobp.2016.01.013. Epub 2016 Mar 17.


High-specificity detection of rare alleles with Paired-End Low Error Sequencing (PELE-Seq).

Preston JL, Royall AE, Randel MA, Sikkink KL, Phillips PC, Johnson EA.

BMC Genomics. 2016 Jun 14;17:464. doi: 10.1186/s12864-016-2669-3.


Comparative genomic analysis of upstream miRNA regulatory motifs in Caenorhabditis.

Jovelin R, Krizus A, Taghizada B, Gray JC, Phillips PC, Claycomb JM, Cutter AD.

RNA. 2016 Jul;22(7):968-78. doi: 10.1261/rna.055392.115. Epub 2016 May 2.


Evolution: Five Heads Are Better Than One.

Phillips PC.

Curr Biol. 2016 Apr 4;26(7):R283-5. doi: 10.1016/j.cub.2016.02.048.


Intrinsic differences between males and females determine sex-specific consequences of inbreeding.

Ebel ER, Phillips PC.

BMC Evol Biol. 2016 Feb 9;16:36. doi: 10.1186/s12862-016-0604-5.


Correction: Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes.

Fierst JL, Willis JH, Thomas CG, Wang W, Reynolds RM, Ahearne TE, Cutter AD, Phillips PC.

PLoS Genet. 2015 Sep 22;11(9):e1005497. doi: 10.1371/journal.pgen.1005497. eCollection 2015 Sep. No abstract available.


Carboplatin Rechallenge After Hypersensitivity Reactions in Pediatric Patients With Low-Grade Glioma.

Shah AC, Minturn JE, Li Y, Belasco JB, Phillips PC, Kang TI, Cole KA, Waanders AJ, Pollack R, Didomenico C, Wildes C, Fisher MJ.

Pediatr Blood Cancer. 2016 Jan;63(1):21-6. doi: 10.1002/pbc.25697. Epub 2015 Jul 31.


Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes.

Fierst JL, Willis JH, Thomas CG, Wang W, Reynolds RM, Ahearne TE, Cutter AD, Phillips PC.

PLoS Genet. 2015 Jun 26;11(6):e1005323. doi: 10.1371/journal.pgen.1005323. eCollection 2015 Jun. Erratum in: PLoS Genet. 2015 Sep;11(9):e1005497.


Natural and experimental evolution of sexual conflict within Caenorhabditis nematodes.

Palopoli MF, Peden C, Woo C, Akiha K, Ary M, Cruze L, Anderson JL, Phillips PC.

BMC Evol Biol. 2015 May 22;15:93. doi: 10.1186/s12862-015-0377-2.


Environmentally induced changes in correlated responses to selection reveal variable pleiotropy across a complex genetic network.

Sikkink KL, Reynolds RM, Cresko WA, Phillips PC.

Evolution. 2015 May;69(5):1128-42. doi: 10.1111/evo.12651. Epub 2015 May 7.


The locus of sexual selection: moving sexual selection studies into the post-genomics era.

Wilkinson GS, Breden F, Mank JE, Ritchie MG, Higginson AD, Radwan J, Jaquiery J, Salzburger W, Arriero E, Barribeau SM, Phillips PC, Renn SC, Rowe L.

J Evol Biol. 2015 Apr;28(4):739-55. doi: 10.1111/jeb.12621. Epub 2015 Apr 17. Review.


Cell biology: scaling and the emergence of evolutionary cell biology.

Phillips PC, Bowerman B.

Curr Biol. 2015 Mar 16;25(6):R223-R225. doi: 10.1016/j.cub.2015.01.049.


Modeling the evolution of complex genetic systems: the gene network family tree.

Fierst JL, Phillips PC.

J Exp Zool B Mol Dev Evol. 2015 Jan;324(1):1-12. doi: 10.1002/jez.b.22597.


The transgenerational effects of heat stress in the nematode Caenorhabditis remanei are negative and rapidly eliminated under direct selection for increased stress resistance in larvae.

Sikkink KL, Ituarte CM, Reynolds RM, Cresko WA, Phillips PC.

Genomics. 2014 Dec;104(6 Pt A):438-46. doi: 10.1016/j.ygeno.2014.09.014. Epub 2014 Oct 2.


Hermaphrodite life history and the maintenance of partial selfing in experimental populations of Caenorhabditis elegans.

Carvalho S, Phillips PC, Teotónio H.

BMC Evol Biol. 2014 Jun 2;14:117. doi: 10.1186/1471-2148-14-117.


Rapid evolution of phenotypic plasticity and shifting thresholds of genetic assimilation in the nematode Caenorhabditis remanei.

Sikkink KL, Reynolds RM, Ituarte CM, Cresko WA, Phillips PC.

G3 (Bethesda). 2014 Apr 11;4(6):1103-12. doi: 10.1534/g3.114.010553.


A recent global selective sweep on the age-1 phosphatidylinositol 3-OH kinase regulator of the insulin-like signaling pathway within Caenorhabditis remanei.

Jovelin R, Comstock JS, Cutter AD, Phillips PC.

G3 (Bethesda). 2014 Apr 11;4(6):1123-33. doi: 10.1534/g3.114.010629.


Natural variation for lifespan and stress response in the nematode Caenorhabditis remanei.

Reynolds RM, Phillips PC.

PLoS One. 2013 Apr 26;8(4):e58212. doi: 10.1371/journal.pone.0058212. Print 2013.


Daily temperature fluctuations unpredictably influence developmental rate and morphology at a critical early larval stage in a frog.

Arrighi JM, Lencer ES, Jukar A, Park D, Phillips PC, Kaplan RH.

BMC Ecol. 2013 May 4;13:18. doi: 10.1186/1472-6785-13-18.


Headache as a risk factor for neurovascular events in pediatric brain tumor patients.

Kranick SM, Campen CJ, Kasner SE, Kessler SK, Zimmerman RA, Lustig RA, Phillips PC, Beslow LA, Ichord R, Fisher MJ.

Neurology. 2013 Apr 16;80(16):1452-6. doi: 10.1212/WNL.0b013e31828cf81e. Epub 2013 Mar 13.


More than the sum of its parts: a complex epistatic network underlies natural variation in thermal preference behavior in Caenorhabditis elegans.

Gaertner BE, Parmenter MD, Rockman MV, Kruglyak L, Phillips PC.

Genetics. 2012 Dec;192(4):1533-42. doi: 10.1534/genetics.112.142877. Epub 2012 Oct 19.


Variance in epistasis links gene regulation and evolutionary rate in the yeast genetic interaction network.

Fierst JL, Phillips PC.

Genome Biol Evol. 2012;4(11):1080-7. doi: 10.1093/gbe/evs083.


Cranial irradiation increases risk of stroke in pediatric brain tumor survivors.

Campen CJ, Kranick SM, Kasner SE, Kessler SK, Zimmerman RA, Lustig R, Phillips PC, Storm PB, Smith SE, Ichord R, Fisher MJ.

Stroke. 2012 Nov;43(11):3035-40. doi: 10.1161/STROKEAHA.112.661561. Epub 2012 Sep 11.


Fertility/longevity trade-offs under limiting-male conditions in mating populations of Caenorhabditis elegans.

Wu D, Tedesco PM, Phillips PC, Johnson TE.

Exp Gerontol. 2012 Oct;47(10):759-63. doi: 10.1016/j.exger.2012.06.010. Epub 2012 Jul 4.


Phase measurement of cognitive impairment specific to radiotherapy.

Armstrong CL, Shera DM, Lustig RA, Phillips PC.

Int J Radiat Oncol Biol Phys. 2012 Jul 1;83(3):e319-24. doi: 10.1016/j.ijrobp.2011.12.083. Epub 2012 Mar 13.


Self-fertilization sweeps up variation in the worm genome.

Phillips PC.

Nat Genet. 2012 Feb 27;44(3):237-8. doi: 10.1038/ng.2201.


Independent axes of genetic variation and parallel evolutionary divergence of opercle bone shape in threespine stickleback.

Kimmel CB, Cresko WA, Phillips PC, Ullmann B, Currey M, von Hippel F, Kristjánsson BK, Gelmond O, McGuigan K.

Evolution. 2012 Feb;66(2):419-34. doi: 10.1111/j.1558-5646.2011.01441.x. Epub 2011 Sep 25.


Experimental evolution of the Caenorhabditis elegans sex determination pathway.

Chandler CH, Chadderdon GE, Phillips PC, Dworkin I, Janzen FJ.

Evolution. 2012 Jan;66(1):82-93. doi: 10.1111/j.1558-5646.2011.01420.x. Epub 2011 Sep 8.


Microfluidic devices for analysis of spatial orientation behaviors in semi-restrained Caenorhabditis elegans.

McCormick KE, Gaertner BE, Sottile M, Phillips PC, Lockery SR.

PLoS One. 2011;6(10):e25710. doi: 10.1371/journal.pone.0025710. Epub 2011 Oct 12.


Experimental evolution reveals antagonistic pleiotropy in reproductive timing but not life span in Caenorhabditis elegans.

Anderson JL, Reynolds RM, Morran LT, Tolman-Thompson J, Phillips PC.

J Gerontol A Biol Sci Med Sci. 2011 Dec;66(12):1300-8. doi: 10.1093/gerona/glr143. Epub 2011 Oct 5.


Expression level drives the pattern of selective constraints along the insulin/Tor signal transduction pathway in Caenorhabditis.

Jovelin R, Phillips PC.

Genome Biol Evol. 2011;3:715-22. doi: 10.1093/gbe/evr071. Epub 2011 Aug 17.

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