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Items: 31

1.

Quantitative Trait Locus and Integrative Genomics Revealed Candidate Modifier Genes for Ectopic Mineralization in Mouse Models of Pseudoxanthoma Elasticum.

Li Q, Philip VM, Stearns TM, Bubier JA, King BL, Low BE, Wiles MV, Saeidian AH, Sundberg BA, Uitto J, Sundberg JP.

J Invest Dermatol. 2019 Jun 15. pii: S0022-202X(19)31761-0. doi: 10.1016/j.jid.2019.04.023. [Epub ahead of print]

PMID:
31207231
2.

Exercise prevents obesity-induced cognitive decline and white matter damage in mice.

Graham LC, Grabowska WA, Chun Y, Risacher SL, Philip VM, Saykin AJ; Alzheimer's Disease Neuroimaging Initiative (ADNI), Sukoff Rizzo SJ, Howell GR.

Neurobiol Aging. 2019 Aug;80:154-172. doi: 10.1016/j.neurobiolaging.2019.03.018. Epub 2019 May 3.

3.

High-Diversity Mouse Populations for Complex Traits.

Saul MC, Philip VM, Reinholdt LG; Center for Systems Neurogenetics of Addiction, Chesler EJ.

Trends Genet. 2019 Jul;35(7):501-514. doi: 10.1016/j.tig.2019.04.003. Epub 2019 May 24. Review.

4.

Identification of Pre-symptomatic Gene Signatures That Predict Resilience to Cognitive Decline in the Genetically Diverse AD-BXD Model.

Neuner SM, Heuer SE, Zhang JG, Philip VM, Kaczorowski CC.

Front Genet. 2019 Feb 6;10:35. doi: 10.3389/fgene.2019.00035. eCollection 2019.

5.

Large-scale discovery of mouse transgenic integration sites reveals frequent structural variation and insertional mutagenesis.

Goodwin LO, Splinter E, Davis TL, Urban R, He H, Braun RE, Chesler EJ, Kumar V, van Min M, Ndukum J, Philip VM, Reinholdt LG, Svenson K, White JK, Sasner M, Lutz C, Murray SA.

Genome Res. 2019 Mar;29(3):494-505. doi: 10.1101/gr.233866.117. Epub 2019 Jan 18.

6.

Author Correction: Comparing phenotypic variation between inbred and outbred mice.

Tuttle AH, Philip VM, Chesler EJ, Mogil JS.

Nat Methods. 2019 Feb;16(2):206. doi: 10.1038/s41592-018-0298-2.

PMID:
30584248
7.

Comparing phenotypic variation between inbred and outbred mice.

Tuttle AH, Philip VM, Chesler EJ, Mogil JS.

Nat Methods. 2018 Dec;15(12):994-996. doi: 10.1038/s41592-018-0224-7. No abstract available. Erratum in: Nat Methods. 2019 Feb;16(2):206.

8.

Suitability of Nasotracheal Intubation using King Vision and TruviewPCD Video Laryngoscopes: A Randomized Clinical Trial.

Mishra G, Philip VM, Kumar VRH, Sivashanmugam T.

Anesth Essays Res. 2018 Apr-Jun;12(2):581-585. doi: 10.4103/aer.AER_68_18.

9.

Genome-wide association for testis weight in the diversity outbred mouse population.

Yuan JT, Gatti DM, Philip VM, Kasparek S, Kreuzman AM, Mansky B, Sharif K, Taterra D, Taylor WM, Thomas M, Ward JO, Holmes A, Chesler EJ, Parker CC.

Mamm Genome. 2018 Jun;29(5-6):310-324. doi: 10.1007/s00335-018-9745-8. Epub 2018 Apr 24.

10.

A Bayesian Framework for Generalized Linear Mixed Modeling Identifies New Candidate Loci for Late-Onset Alzheimer's Disease.

Wang X, Philip VM, Ananda G, White CC, Malhotra A, Michalski PJ, Karuturi KRM, Chintalapudi SR, Acklin C, Sasner M, Bennett DA, De Jager PL, Howell GR, Carter GW.

Genetics. 2018 May;209(1):51-64. doi: 10.1534/genetics.117.300673. Epub 2018 Mar 5.

11.

Mouse Phenome Database: an integrative database and analysis suite for curated empirical phenotype data from laboratory mice.

Bogue MA, Grubb SC, Walton DO, Philip VM, Kolishovski G, Stearns T, Dunn MH, Skelly DA, Kadakkuzha B, TeHennepe G, Kunde-Ramamoorthy G, Chesler EJ.

Nucleic Acids Res. 2018 Jan 4;46(D1):D843-D850. doi: 10.1093/nar/gkx1082.

12.

Systems Genetic Analysis in GeneNetwork.org.

Parker CC, Dickson PE, Philip VM, Thomas M, Chesler EJ.

Curr Protoc Neurosci. 2017 Apr 10;79:8.39.1-8.39.20. doi: 10.1002/cpns.23.

13.

Vitamin B3 modulates mitochondrial vulnerability and prevents glaucoma in aged mice.

Williams PA, Harder JM, Foxworth NE, Cochran KE, Philip VM, Porciatti V, Smithies O, John SW.

Science. 2017 Feb 17;355(6326):756-760. doi: 10.1126/science.aal0092.

14.

Temporal dynamics of the developing lung transcriptome in three common inbred strains of laboratory mice reveals multiple stages of postnatal alveolar development.

Beauchemin KJ, Wells JM, Kho AT, Philip VM, Kamir D, Kohane IS, Graber JH, Bult CJ.

PeerJ. 2016 Aug 9;4:e2318. doi: 10.7717/peerj.2318. eCollection 2016.

15.

Minor genomic differences between related B6 and B10 mice affect severity of schistosome infection by governing the mode of dendritic cell activation.

Smith PM, Sproule TJ, Philip VM, Roopenian DC, Stadecker MJ.

Eur J Immunol. 2015 Aug;45(8):2312-23. doi: 10.1002/eji.201545547. Epub 2015 Jun 9.

16.

Discovery of transgene insertion sites by high throughput sequencing of mate pair libraries.

Srivastava A, Philip VM, Greenstein I, Rowe LB, Barter M, Lutz C, Reinholdt LG.

BMC Genomics. 2014 May 14;15:367. doi: 10.1186/1471-2164-15-367.

17.

Molecular identification of collagen 17a1 as a major genetic modifier of laminin gamma 2 mutation-induced junctional epidermolysis bullosa in mice.

Sproule TJ, Bubier JA, Grandi FC, Sun VZ, Philip VM, McPhee CG, Adkins EB, Sundberg JP, Roopenian DC.

PLoS Genet. 2014 Feb 13;10(2):e1004068. doi: 10.1371/journal.pgen.1004068. eCollection 2014 Feb.

18.
19.

CAPE: an R package for combined analysis of pleiotropy and epistasis.

Tyler AL, Lu W, Hendrick JJ, Philip VM, Carter GW.

PLoS Comput Biol. 2013 Oct;9(10):e1003270. doi: 10.1371/journal.pcbi.1003270. Epub 2013 Oct 24.

20.

Genetic modifier loci of mouse Mfrp(rd6) identified by quantitative trait locus analysis.

Won J, Charette JR, Philip VM, Stearns TM, Zhang W, Naggert JK, Krebs MP, Nishina PM.

Exp Eye Res. 2014 Jan;118:30-5. doi: 10.1016/j.exer.2013.10.020. Epub 2013 Nov 4.

21.

High-precision genetic mapping of behavioral traits in the diversity outbred mouse population.

Logan RW, Robledo RF, Recla JM, Philip VM, Bubier JA, Jay JJ, Harwood C, Wilcox T, Gatti DM, Bult CJ, Churchill GA, Chesler EJ.

Genes Brain Behav. 2013 Jun;12(4):424-37. doi: 10.1111/gbb.12029. Epub 2013 Mar 20.

22.

Genetic variation in hippocampal microRNA expression differences in C57BL/6 J X DBA/2 J (BXD) recombinant inbred mouse strains.

Parsons MJ, Grimm C, Paya-Cano JL, Fernandes C, Liu L, Philip VM, Chesler EJ, Nietfeld W, Lehrach H, Schalkwyk LC.

BMC Genomics. 2012 Sep 13;13:476. doi: 10.1186/1471-2164-13-476.

23.

Genetic analysis of albuminuria in collaborative cross and multiple mouse intercross populations.

Thaisz J, Tsaih SW, Feng M, Philip VM, Zhang Y, Yanas L, Sheehan S, Xu L, Miller DR, Paigen B, Chesler EJ, Churchill GA, Dipetrillo K.

Am J Physiol Renal Physiol. 2012 Oct;303(7):F972-81. doi: 10.1152/ajprenal.00690.2011. Epub 2012 Aug 1.

24.

Genetic analysis in the Collaborative Cross breeding population.

Philip VM, Sokoloff G, Ackert-Bicknell CL, Striz M, Branstetter L, Beckmann MA, Spence JS, Jackson BL, Galloway LD, Barker P, Wymore AM, Hunsicker PR, Durtschi DC, Shaw GS, Shinpock S, Manly KF, Miller DR, Donohue KD, Culiat CT, Churchill GA, Lariviere WR, Palmer AA, O'Hara BF, Voy BH, Chesler EJ.

Genome Res. 2011 Aug;21(8):1223-38. doi: 10.1101/gr.113886.110. Epub 2011 Jul 6.

25.

Genomic loci and candidate genes underlying inflammatory nociception.

Nair HK, Hain H, Quock RM, Philip VM, Chesler EJ, Belknap JK, Lariviere WR.

Pain. 2011 Mar;152(3):599-606. doi: 10.1016/j.pain.2010.11.029. Epub 2010 Dec 30.

26.

High-throughput behavioral phenotyping in the expanded panel of BXD recombinant inbred strains.

Philip VM, Duvvuru S, Gomero B, Ansah TA, Blaha CD, Cook MN, Hamre KM, Lariviere WR, Matthews DB, Mittleman G, Goldowitz D, Chesler EJ.

Genes Brain Behav. 2010 Mar 1;9(2):129-59. doi: 10.1111/j.1601-183X.2009.00540.x. Epub 2009 Sep 22.

27.

Ontological Discovery Environment: a system for integrating gene-phenotype associations.

Baker EJ, Jay JJ, Philip VM, Zhang Y, Li Z, Kirova R, Langston MA, Chesler EJ.

Genomics. 2009 Dec;94(6):377-87. doi: 10.1016/j.ygeno.2009.08.016. Epub 2009 Sep 3.

28.

Supplementing high-density SNP microarrays for additional coverage of disease-related genes: addiction as a paradigm.

Saccone SF, Bierut LJ, Chesler EJ, Kalivas PW, Lerman C, Saccone NL, Uhl GR, Li CY, Philip VM, Edenberg HJ, Sherry ST, Feolo M, Moyzis RK, Rutter JL.

PLoS One. 2009;4(4):e5225. doi: 10.1371/journal.pone.0005225. Epub 2009 Apr 21.

29.

The Collaborative Cross at Oak Ridge National Laboratory: developing a powerful resource for systems genetics.

Chesler EJ, Miller DR, Branstetter LR, Galloway LD, Jackson BL, Philip VM, Voy BH, Culiat CT, Threadgill DW, Williams RW, Churchill GA, Johnson DK, Manly KF.

Mamm Genome. 2008 Jun;19(6):382-9. doi: 10.1007/s00335-008-9135-8. Epub 2008 Aug 21.

30.

Genetic mapping of vocalization to a series of increasing acute footshocks using B6.A consomic and B6.D2 congenic mouse strains.

Matthews DB, Chesler EJ, Cook MN, Cockroft J, Philip VM, Goldowitz D.

Behav Genet. 2008 Jul;38(4):417-23. doi: 10.1007/s10519-008-9210-7. Epub 2008 Jun 6.

31.

A preference for edgewise interactions between aromatic rings and carboxylate anions: the biological relevance of anion-quadrupole interactions.

Jackson MR, Beahm R, Duvvuru S, Narasimhan C, Wu J, Wang HN, Philip VM, Hinde RJ, Howell EE.

J Phys Chem B. 2007 Jul 19;111(28):8242-9. Epub 2007 Jun 20.

PMID:
17580852

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