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Items: 25

1.

A Brain Module for Scalable Control of Complex, Multi-motor Threat Displays.

Duistermars BJ, Pfeiffer BD, Hoopfer ED, Anderson DJ.

Neuron. 2018 Dec 19;100(6):1474-1490.e4. doi: 10.1016/j.neuron.2018.10.027. Epub 2018 Nov 8.

PMID:
30415997
2.

A Circuit Node that Integrates Convergent Input from Neuromodulatory and Social Behavior-Promoting Neurons to Control Aggression in Drosophila.

Watanabe K, Chiu H, Pfeiffer BD, Wong AM, Hoopfer ED, Rubin GM, Anderson DJ.

Neuron. 2017 Aug 30;95(5):1112-1128.e7. doi: 10.1016/j.neuron.2017.08.017.

3.

Neuron hemilineages provide the functional ground plan for the Drosophila ventral nervous system.

Harris RM, Pfeiffer BD, Rubin GM, Truman JW.

Elife. 2015 Jul 20;4. doi: 10.7554/eLife.04493.

4.

Optimized tools for multicolor stochastic labeling reveal diverse stereotyped cell arrangements in the fly visual system.

Nern A, Pfeiffer BD, Rubin GM.

Proc Natl Acad Sci U S A. 2015 Jun 2;112(22):E2967-76. doi: 10.1073/pnas.1506763112. Epub 2015 May 11.

5.

High-performance probes for light and electron microscopy.

Viswanathan S, Williams ME, Bloss EB, Stasevich TJ, Speer CM, Nern A, Pfeiffer BD, Hooks BM, Li WP, English BP, Tian T, Henry GL, Macklin JJ, Patel R, Gerfen CR, Zhuang X, Wang Y, Rubin GM, Looger LL.

Nat Methods. 2015 Jun;12(6):568-76. doi: 10.1038/nmeth.3365. Epub 2015 Apr 27.

6.

The Release 6 reference sequence of the Drosophila melanogaster genome.

Hoskins RA, Carlson JW, Wan KH, Park S, Mendez I, Galle SE, Booth BW, Pfeiffer BD, George RA, Svirskas R, Krzywinski M, Schein J, Accardo MC, Damia E, Messina G, Méndez-Lago M, de Pablos B, Demakova OV, Andreyeva EN, Boldyreva LV, Marra M, Carvalho AB, Dimitri P, Villasante A, Zhimulev IF, Rubin GM, Karpen GH, Celniker SE.

Genome Res. 2015 Mar;25(3):445-58. doi: 10.1101/gr.185579.114. Epub 2015 Jan 14.

7.

An enhanced gene targeting toolkit for Drosophila: Golic+.

Chen HM, Huang Y, Pfeiffer BD, Yao X, Lee T.

Genetics. 2015 Mar;199(3):683-94. doi: 10.1534/genetics.114.173716. Epub 2015 Jan 2.

8.

Making Drosophila lineage-restricted drivers via patterned recombination in neuroblasts.

Awasaki T, Kao CF, Lee YJ, Yang CP, Huang Y, Pfeiffer BD, Luan H, Jing X, Huang YF, He Y, Schroeder MD, Kuzin A, Brody T, Zugates CT, Odenwald WF, Lee T.

Nat Neurosci. 2014 Apr;17(4):631-7. doi: 10.1038/nn.3654. Epub 2014 Feb 23.

PMID:
24561995
9.

Mutual inhibition among postmitotic neurons regulates robustness of brain wiring in Drosophila.

Langen M, Koch M, Yan J, De Geest N, Erfurth ML, Pfeiffer BD, Schmucker D, Moreau Y, Hassan BA.

Elife. 2013 Mar 5;2:e00337. doi: 10.7554/eLife.00337.

10.

DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila.

Fisher WW, Li JJ, Hammonds AS, Brown JB, Pfeiffer BD, Weiszmann R, MacArthur S, Thomas S, Stamatoyannopoulos JA, Eisen MB, Bickel PJ, Biggin MD, Celniker SE.

Proc Natl Acad Sci U S A. 2012 Dec 26;109(52):21330-5. doi: 10.1073/pnas.1209589110. Epub 2012 Dec 10.

11.

A GAL4-driver line resource for Drosophila neurobiology.

Jenett A, Rubin GM, Ngo TT, Shepherd D, Murphy C, Dionne H, Pfeiffer BD, Cavallaro A, Hall D, Jeter J, Iyer N, Fetter D, Hausenfluck JH, Peng H, Trautman ET, Svirskas RR, Myers EW, Iwinski ZR, Aso Y, DePasquale GM, Enos A, Hulamm P, Lam SC, Li HH, Laverty TR, Long F, Qu L, Murphy SD, Rokicki K, Safford T, Shaw K, Simpson JH, Sowell A, Tae S, Yu Y, Zugates CT.

Cell Rep. 2012 Oct 25;2(4):991-1001. doi: 10.1016/j.celrep.2012.09.011. Epub 2012 Oct 11.

12.

A subset of dopamine neurons signals reward for odour memory in Drosophila.

Liu C, Plaçais PY, Yamagata N, Pfeiffer BD, Aso Y, Friedrich AB, Siwanowicz I, Rubin GM, Preat T, Tanimoto H.

Nature. 2012 Aug 23;488(7412):512-6. doi: 10.1038/nature11304.

PMID:
22810589
13.

Using translational enhancers to increase transgene expression in Drosophila.

Pfeiffer BD, Truman JW, Rubin GM.

Proc Natl Acad Sci U S A. 2012 Apr 24;109(17):6626-31. doi: 10.1073/pnas.1204520109. Epub 2012 Apr 9.

14.

Multiple new site-specific recombinases for use in manipulating animal genomes.

Nern A, Pfeiffer BD, Svoboda K, Rubin GM.

Proc Natl Acad Sci U S A. 2011 Aug 23;108(34):14198-203. doi: 10.1073/pnas.1111704108. Epub 2011 Aug 9.

15.

Refinement of tools for targeted gene expression in Drosophila.

Pfeiffer BD, Ngo TT, Hibbard KL, Murphy C, Jenett A, Truman JW, Rubin GM.

Genetics. 2010 Oct;186(2):735-55. doi: 10.1534/genetics.110.119917. Epub 2010 Aug 9.

16.

A Drosophila resource of transgenic RNAi lines for neurogenetics.

Ni JQ, Liu LP, Binari R, Hardy R, Shim HS, Cavallaro A, Booker M, Pfeiffer BD, Markstein M, Wang H, Villalta C, Laverty TR, Perkins LA, Perrimon N.

Genetics. 2009 Aug;182(4):1089-100. doi: 10.1534/genetics.109.103630. Epub 2009 Jun 1.

17.

Regulation of early endosomal entry by the Drosophila tumor suppressors Rabenosyn and Vps45.

Morrison HA, Dionne H, Rusten TE, Brech A, Fisher WW, Pfeiffer BD, Celniker SE, Stenmark H, Bilder D.

Mol Biol Cell. 2008 Oct;19(10):4167-76. doi: 10.1091/mbc.E08-07-0716. Epub 2008 Aug 6.

18.

Tools for neuroanatomy and neurogenetics in Drosophila.

Pfeiffer BD, Jenett A, Hammonds AS, Ngo TT, Misra S, Murphy C, Scully A, Carlson JW, Wan KH, Laverty TR, Mungall C, Svirskas R, Kadonaga JT, Doe CQ, Eisen MB, Celniker SE, Rubin GM.

Proc Natl Acad Sci U S A. 2008 Jul 15;105(28):9715-20. doi: 10.1073/pnas.0803697105. Epub 2008 Jul 9.

19.
20.

Evolution of the homeobox complex in the Diptera.

Lewis EB, Pfeiffer BD, Mathog DR, Celniker SE.

Curr Biol. 2003 Aug 5;13(15):R587-8. No abstract available.

21.

Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome.

Bergman CM, Pfeiffer BD, Rincón-Limas DE, Hoskins RA, Gnirke A, Mungall CJ, Wang AM, Kronmiller B, Pacleb J, Park S, Stapleton M, Wan K, George RA, de Jong PJ, Botas J, Rubin GM, Celniker SE.

Genome Biol. 2002;3(12):RESEARCH0086. Epub 2002 Dec 30.

22.

Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

Celniker SE, Wheeler DA, Kronmiller B, Carlson JW, Halpern A, Patel S, Adams M, Champe M, Dugan SP, Frise E, Hodgson A, George RA, Hoskins RA, Laverty T, Muzny DM, Nelson CR, Pacleb JM, Park S, Pfeiffer BD, Richards S, Sodergren EJ, Svirskas R, Tabor PE, Wan K, Stapleton M, Sutton GG, Venter C, Weinstock G, Scherer SE, Myers EW, Gibbs RA, Rubin GM.

Genome Biol. 2002;3(12):RESEARCH0079. Epub 2002 Dec 23.

23.

Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome.

Berman BP, Nibu Y, Pfeiffer BD, Tomancak P, Celniker SE, Levine M, Rubin GM, Eisen MB.

Proc Natl Acad Sci U S A. 2002 Jan 22;99(2):757-62.

24.

The genome sequence of Drosophila melanogaster.

Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA, Galle RF, George RA, Lewis SE, Richards S, Ashburner M, Henderson SN, Sutton GG, Wortman JR, Yandell MD, Zhang Q, Chen LX, Brandon RC, Rogers YH, Blazej RG, Champe M, Pfeiffer BD, Wan KH, Doyle C, Baxter EG, Helt G, Nelson CR, Gabor GL, Abril JF, Agbayani A, An HJ, Andrews-Pfannkoch C, Baldwin D, Ballew RM, Basu A, Baxendale J, Bayraktaroglu L, Beasley EM, Beeson KY, Benos PV, Berman BP, Bhandari D, Bolshakov S, Borkova D, Botchan MR, Bouck J, Brokstein P, Brottier P, Burtis KC, Busam DA, Butler H, Cadieu E, Center A, Chandra I, Cherry JM, Cawley S, Dahlke C, Davenport LB, Davies P, de Pablos B, Delcher A, Deng Z, Mays AD, Dew I, Dietz SM, Dodson K, Doup LE, Downes M, Dugan-Rocha S, Dunkov BC, Dunn P, Durbin KJ, Evangelista CC, Ferraz C, Ferriera S, Fleischmann W, Fosler C, Gabrielian AE, Garg NS, Gelbart WM, Glasser K, Glodek A, Gong F, Gorrell JH, Gu Z, Guan P, Harris M, Harris NL, Harvey D, Heiman TJ, Hernandez JR, Houck J, Hostin D, Houston KA, Howland TJ, Wei MH, Ibegwam C, Jalali M, Kalush F, Karpen GH, Ke Z, Kennison JA, Ketchum KA, Kimmel BE, Kodira CD, Kraft C, Kravitz S, Kulp D, Lai Z, Lasko P, Lei Y, Levitsky AA, Li J, Li Z, Liang Y, Lin X, Liu X, Mattei B, McIntosh TC, McLeod MP, McPherson D, Merkulov G, Milshina NV, Mobarry C, Morris J, Moshrefi A, Mount SM, Moy M, Murphy B, Murphy L, Muzny DM, Nelson DL, Nelson DR, Nelson KA, Nixon K, Nusskern DR, Pacleb JM, Palazzolo M, Pittman GS, Pan S, Pollard J, Puri V, Reese MG, Reinert K, Remington K, Saunders RD, Scheeler F, Shen H, Shue BC, Sidén-Kiamos I, Simpson M, Skupski MP, Smith T, Spier E, Spradling AC, Stapleton M, Strong R, Sun E, Svirskas R, Tector C, Turner R, Venter E, Wang AH, Wang X, Wang ZY, Wassarman DA, Weinstock GM, Weissenbach J, Williams SM, WoodageT, Worley KC, Wu D, Yang S, Yao QA, Ye J, Yeh RF, Zaveri JS, Zhan M, Zhang G, Zhao Q, Zheng L, Zheng XH, Zhong FN, Zhong W, Zhou X, Zhu S, Zhu X, Smith HO, Gibbs RA, Myers EW, Rubin GM, Venter JC.

Science. 2000 Mar 24;287(5461):2185-95.

PMID:
10731132
25.

Human herpesvirus 6 infection.

Huang LM, Pfeiffer BD, Cho CT.

Zhonghua Min Guo Xiao Er Ke Yi Xue Hui Za Zhi. 1997 Jan-Feb;38(1):1-7. Review.

PMID:
9066182

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