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Items: 1 to 50 of 452

1.

Exploiting selection at linked sites to infer the rate and strength of adaptation.

Uricchio LH, Petrov DA, Enard D.

Nat Ecol Evol. 2019 Jun;3(6):977-984. doi: 10.1038/s41559-019-0890-6. Epub 2019 May 6.

PMID:
31061475
2.

Model and human observer reproducibility for detection of microcalcification clusters in digital breast tomosynthesis images of three-dimensionally structured test object.

Petrov D, Marshall N, Young K, Zhang G, Bosmans H.

J Med Imaging (Bellingham). 2019 Jan;6(1):015503. doi: 10.1117/1.JMI.6.1.015503. Epub 2019 Mar 23.

PMID:
30915383
3.

RIPK3 expression as a potential predictive and prognostic marker in metastatic colon cancer.

Conev NV, Dimitrova EG, Bogdanova MK, Kashlov YK, Chaushev BG, Radanova MA, Petrov DP, Georgiev KD, Bachvarov CH, Todorov GN, Kalchev KP, Popov HB, Manev RR, Donev IS.

Clin Invest Med. 2019 Mar 23;42(1):E31-E38. doi: 10.25011/cim.v42i1.32390.

PMID:
30904034
4.

Effects of pressure and composition on Raman spectra of CO-H2-CO2-CH4 mixtures.

Petrov DV, Matrosov II, Zaripov AR, Maznoy AS.

Spectrochim Acta A Mol Biomol Spectrosc. 2019 May 15;215:363-370. doi: 10.1016/j.saa.2019.03.006. Epub 2019 Mar 4.

PMID:
30852284
5.

Pharmacological screening of a new alpha-2 adrenergic receptor agonist, mafedine, in zebrafish.

Sysoev YI, Meshalkina DA, Petrov DV, Okovityi SV, Musienko PE, Kalueff AV.

Neurosci Lett. 2019 May 14;701:234-239. doi: 10.1016/j.neulet.2019.03.001. Epub 2019 Mar 2.

PMID:
30836120
6.

Novel approach using ultrasonic bone curettage and transoral robotic surgery for en bloc resection of cervical spine chordoma: case report.

Petrov D, Spadola M, Berger C, Glauser G, Mahmoud AF, O'Malley B, Malhotra NR.

J Neurosurg Spine. 2019 Mar 1:1-6. doi: 10.3171/2018.11.SPINE181162. [Epub ahead of print]

PMID:
30835711
7.

Systematic approach to a channelized Hotelling model observer implementation for a physical phantom containing mass-like lesions: Application to digital breast tomosynthesis.

Petrov D, Marshall NW, Young KC, Bosmans H.

Phys Med. 2019 Feb;58:8-20. doi: 10.1016/j.ejmp.2018.12.033. Epub 2019 Jan 17.

PMID:
30824154
8.

Stress response, behavior, and development are shaped by transposable element-induced mutations in Drosophila.

Rech GE, Bogaerts-Márquez M, Barrón MG, Merenciano M, Villanueva-Cañas JL, Horváth V, Fiston-Lavier AS, Luyten I, Venkataram S, Quesneville H, Petrov DA, González J.

PLoS Genet. 2019 Feb 12;15(2):e1007900. doi: 10.1371/journal.pgen.1007900. eCollection 2019 Feb.

9.

Multimeric Rhodamine Dye-Induced Aggregation of Silver Nanoparticles for Surface-Enhanced Raman Scattering.

Bartolowits MD, Xin M, Petrov DP, Tague TJ Jr, Davisson VJ.

ACS Omega. 2019 Jan 31;4(1):140-145. doi: 10.1021/acsomega.8b02970. Epub 2019 Jan 3.

10.

Stable p-Wave Resonant Two-Dimensional Fermi-Bose Dimers.

Bazak B, Petrov DS.

Phys Rev Lett. 2018 Dec 28;121(26):263001. doi: 10.1103/PhysRevLett.121.263001.

PMID:
30636136
11.

Reaction kinetics of ultracold molecule-molecule collisions.

Hoffmann DK, Paintner T, Limmer W, Petrov DS, Denschlag JH.

Nat Commun. 2018 Dec 7;9(1):5244. doi: 10.1038/s41467-018-07576-1.

12.

[ONSTEP procedure for inguinal hernia repair].

Smirnov AV, Petrov DY, Panin AV, Dubrovsky AV, Nemkova AI.

Khirurgiia (Mosk). 2018;(10):12-17. doi: 10.17116/hirurgia201810112. Russian.

PMID:
30531730
13.

Tissue-Specific cis-Regulatory Divergence Implicates eloF in Inhibiting Interspecies Mating in Drosophila.

Combs PA, Krupp JJ, Khosla NM, Bua D, Petrov DA, Levine JD, Fraser HB.

Curr Biol. 2018 Dec 17;28(24):3969-3975.e3. doi: 10.1016/j.cub.2018.10.036. Epub 2018 Nov 29.

PMID:
30503619
14.

Fully endoscopic microvascular decompression for hemifacial spasm.

Flanders TM, Blue R, Roberts S, McShane BJ, Wilent B, Tambi V, Petrov D, Lee JYK.

J Neurosurg. 2018 Oct 1:1-7. doi: 10.3171/2018.4.JNS172631. [Epub ahead of print]

PMID:
30497190
15.

Management of Primary Osseous Spinal Tumors with PET.

Batouli A, Gholamrezanezhad A, Petrov D, Rudkin S, Matcuk G, Jadvar H.

PET Clin. 2019 Jan;14(1):91-101. doi: 10.1016/j.cpet.2018.08.002. Epub 2018 Oct 24. Review.

PMID:
30420225
16.

Cost-effective assembly of the African wild dog (Lycaon pictus) genome using linked reads.

Armstrong EE, Taylor RW, Prost S, Blinston P, van der Meer E, Madzikanda H, Mufute O, Mandisodza-Chikerema R, Stuelpnagel J, Sillero-Zubiri C, Petrov D.

Gigascience. 2019 Feb 1;8(2). doi: 10.1093/gigascience/giy124.

17.

Evidence that RNA Viruses Drove Adaptive Introgression between Neanderthals and Modern Humans.

Enard D, Petrov DA.

Cell. 2018 Oct 4;175(2):360-371.e13. doi: 10.1016/j.cell.2018.08.034.

PMID:
30290142
18.

[Minimally invasive treatment of rare forms of mechanical intestinal obstruction].

Lebedev AG, Levitskiy VD, Rogal MM, Yartsev PA, Petrov DI.

Khirurgiia (Mosk). 2018;(8. Vyp. 2):24-29. doi: 10.17116/hirurgia201808224. Russian.

PMID:
30199048
19.

Spatiotemporal dynamics and genome-wide association genome-wide association analysis of desiccation tolerance in Drosophila melanogaster.

Rajpurohit S, Gefen E, Bergland AO, Petrov DA, Gibbs AG, Schmidt PS.

Mol Ecol. 2018 Sep;27(17):3525-3540. doi: 10.1111/mec.14814. Epub 2018 Aug 13.

PMID:
30051644
20.

Machine Learning for Large-Scale Quality Control of 3D Shape Models in Neuroimaging.

Petrov D, Gutman BA, Yu SJ, van Erp TGM, Turner JA, Schmaal L, Veltman D, Wang L, Alpert K, Isaev D, Zavaliangos-Petropulu A, Ching CRK, Calhoun V, Glahn D, Satterthwaite TD, Andreasen OA, Borgwardt S, Howells F, Groenewold N, Voineskos A, Radua J, Potkin SG, Crespo-Facorro B, Tordesillas-Gutiérrez D, Shen L, Lebedeva I, Spalletta G, Donohoe G, Kochunov P, Rosa PGP, James A, Dannlowski U, Baune BT, Aleman A, Gotlib IH, Walter H, Walter M, Soares JC, Ehrlich S, Gur RC, Doan NT, Agartz I, Westlye LT, Harrisberger F, Riecher-Rössler A, Uhlmann A, Stein DJ, Dickie EW, Pomarol-Clotet E, Fuentes-Claramonte P, Canales-Rodríguez EJ, Salvador R, Huang AJ, Roiz-Santiañez R, Cong S, Tomyshev A, Piras F, Vecchio D, Banaj N, Ciullo V, Hong E, Busatto G, Zanetti MV, Serpa MH, Cervenka S, Kelly S, Grotegerd D, Sacchet MD, Veer IM, Li M, Wu MJ, Irungu B, Walton E, Thompson PM.

Mach Learn Med Imaging. 2017 Sep;10541:371-378. doi: 10.1007/978-3-319-67389-9_43. Epub 2017 Sep 7.

21.

The two cathepsin B-like proteases of Arabidopsis thaliana are closely related enzymes with discrete endopeptidase and carboxydipeptidase activities.

Porodko A, Cirnski A, Petrov D, Raab T, Paireder M, Mayer B, Maresch D, Nika L, Biniossek ML, Gallois P, Schilling O, Oostenbrink C, Novinec M, Mach L.

Biol Chem. 2018 Sep 25;399(10):1223-1235. doi: 10.1515/hsz-2018-0186.

PMID:
29924726
22.

An epsilon wave on electrocardiogram.

Petrov DB.

BMJ. 2018 Jun 7;361:k1673. doi: 10.1136/bmj.k1673. No abstract available.

PMID:
29880694
23.

Inferior Vena Cava Filter Strut Penetration into the Vertebral Column: A Case of 10-Year Clinical Follow Up.

Petrov DA, Chauhan A, Fitzpatrick S, Altman DT, Casagranda B.

Curr Probl Diagn Radiol. 2018 Apr 18. pii: S0363-0188(18)30091-4. doi: 10.1067/j.cpradiol.2018.04.006. [Epub ahead of print]

PMID:
29773455
24.

Inter-laboratory comparison of channelized hotelling observer computation.

Ba A, Abbey CK, Baek J, Han M, Bouwman RW, Balta C, Brankov J, Massanes F, Gifford HC, Hernandez-Giron I, Veldkamp WJH, Petrov D, Marshall N, Samuelson FW, Zeng R, Solomon JB, Samei E, Timberg P, Förnvik H, Reiser I, Yu L, Gong H, Bochud FO.

Med Phys. 2018 Jul;45(7):3019-3030. doi: 10.1002/mp.12940. Epub 2018 May 17.

PMID:
29704868
25.

Tripolar chromosome segregation drives the association between maternal genotype at variants spanning PLK4 and aneuploidy in human preimplantation embryos.

McCoy RC, Newnham LJ, Ottolini CS, Hoffmann ER, Chatzimeletiou K, Cornejo OE, Zhan Q, Zaninovic N, Rosenwaks Z, Petrov DA, Demko ZP, Sigurjonsson S, Handyside AH.

Hum Mol Genet. 2018 Jul 15;27(14):2573-2585. doi: 10.1093/hmg/ddy147.

PMID:
29688390
26.

Mapping the in vivo fitness landscape of lung adenocarcinoma tumor suppression in mice.

Rogers ZN, McFarland CD, Winters IP, Seoane JA, Brady JJ, Yoon S, Curtis C, Petrov DA, Winslow MM.

Nat Genet. 2018 Apr;50(4):483-486. doi: 10.1038/s41588-018-0083-2. Epub 2018 Apr 2.

27.

Hidden Complexity of Yeast Adaptation under Simple Evolutionary Conditions.

Li Y, Venkataram S, Agarwala A, Dunn B, Petrov DA, Sherlock G, Fisher DS.

Curr Biol. 2018 Feb 19;28(4):515-525.e6. doi: 10.1016/j.cub.2018.01.009. Epub 2018 Feb 8.

28.

Environment of the Eu3+ Ion within Nanocrystalline Eu-Doped BaAl2O4: Correlation of X-ray Diffraction, Mössbauer Spectroscopy, X-ray Absorption Spectroscopy, and Photoluminescence Investigations.

Gržeta B, Lützenkirchen-Hecht D, Vrankić M, Bosnar S, Šarić A, Takahashi M, Petrov D, Bišćan M.

Inorg Chem. 2018 Feb 19;57(4):1744-1756. doi: 10.1021/acs.inorgchem.7b02322. Epub 2018 Feb 8.

PMID:
29420019
29.

Magnetic field induced orientational transitions in liquid crystals doped with carbon nanotubes.

Petrov DA, Skokov PK, Zakhlevnykh AN.

Beilstein J Nanotechnol. 2017 Dec 29;8:2807-2817. doi: 10.3762/bjnano.8.280. eCollection 2017.

30.

Rapid seasonal evolution in innate immunity of wild Drosophila melanogaster.

Behrman EL, Howick VM, Kapun M, Staubach F, Bergland AO, Petrov DA, Lazzaro BP, Schmidt PS.

Proc Biol Sci. 2018 Jan 10;285(1870). pii: 20172599. doi: 10.1098/rspb.2017.2599.

31.

Multiplexed in vivo homology-directed repair and tumor barcoding enables parallel quantification of Kras variant oncogenicity.

Winters IP, Chiou SH, Paulk NK, McFarland CD, Lalgudi PV, Ma RK, Lisowski L, Connolly AJ, Petrov DA, Kay MA, Winslow MM.

Nat Commun. 2017 Dec 12;8(1):2053. doi: 10.1038/s41467-017-01519-y.

32.

Perioperative Internal Iliac Artery Balloon Occlusion, In the Setting of Placenta Accreta and Its Variants: The Role of the Interventional Radiologist.

Petrov DA, Karlberg B, Singh K, Hartman M, Mittal PK.

Curr Probl Diagn Radiol. 2018 Nov;47(6):445-451. doi: 10.1067/j.cpradiol.2017.10.010. Epub 2017 Nov 10. Review.

PMID:
29224889
33.

Ion-induced modification of the sucrose network and its impact on melting of freeze-dried liposomes. DSC and molecular dynamics study.

Bakarić D, Petrov D, Mouvenchery YK, Heiβler S, Oostenbrink C, Schaumann GE.

Chem Phys Lipids. 2018 Jan;210:38-46. doi: 10.1016/j.chemphyslip.2017.11.015. Epub 2017 Nov 24.

PMID:
29179944
34.

Enhancement of Raman scattering of a gaseous medium near the surface of a silver holographic grating.

Petrov DV, Zaripov AR, Toropov NA.

Opt Lett. 2017 Nov 15;42(22):4728-4731. doi: 10.1364/OL.42.004728.

PMID:
29140354
35.

Raman spectrum of methane in nitrogen, carbon dioxide, hydrogen, ethane, and propane environments.

Petrov DV.

Spectrochim Acta A Mol Biomol Spectrosc. 2018 Feb 15;191:573-578. doi: 10.1016/j.saa.2017.10.058. Epub 2017 Oct 25.

PMID:
29112924
36.

Seasonally fluctuating selection can maintain polymorphism at many loci via segregation lift.

Wittmann MJ, Bergland AO, Feldman MW, Schmidt PS, Petrov DA.

Proc Natl Acad Sci U S A. 2017 Nov 14;114(46):E9932-E9941. doi: 10.1073/pnas.1702994114. Epub 2017 Oct 30.

37.

Deep sequencing of natural and experimental populations of Drosophila melanogaster reveals biases in the spectrum of new mutations.

Assaf ZJ, Tilk S, Park J, Siegal ML, Petrov DA.

Genome Res. 2017 Dec;27(12):1988-2000. doi: 10.1101/gr.219956.116. Epub 2017 Oct 27.

38.

High rate of adaptation of mammalian proteins that interact with Plasmodium and related parasites.

Ebel ER, Telis N, Venkataram S, Petrov DA, Enard D.

PLoS Genet. 2017 Sep 28;13(9):e1007023. doi: 10.1371/journal.pgen.1007023. eCollection 2017 Sep.

39.

Relationship of the Optic Nerve to the Medial Rectus Muscle During Endonasal Dissection of the Medial Intraconal Orbital Apex.

Petrov D, Craig J, Thawani J, Abdullah K, Palmer JN, Adappa ND, Lee JYK.

Oper Neurosurg (Hagerstown). 2017 Feb 1;13(1):131-137. doi: 10.1227/NEU.0000000000001204.

PMID:
28931253
40.

Early Preclinical Changes in Hippocampal CREB-Binding Protein Expression in a Mouse Model of Familial Alzheimer's Disease.

Ettcheto M, Abad S, Petrov D, Pedrós I, Busquets O, Sánchez-López E, Casadesús G, Beas-Zarate C, Carro E, Auladell C, Olloquequi J, Pallàs M, Folch J, Camins A.

Mol Neurobiol. 2018 Jun;55(6):4885-4895. doi: 10.1007/s12035-017-0690-4. Epub 2017 Jul 27.

PMID:
28752224
41.

Anatomically Inspired Three-dimensional Micro-tissue Engineered Neural Networks for Nervous System Reconstruction, Modulation, and Modeling.

Struzyna LA, Adewole DO, Gordián-Vélez WJ, Grovola MR, Burrell JC, Katiyar KS, Petrov D, Harris JP, Cullen DK.

J Vis Exp. 2017 May 31;(123). doi: 10.3791/55609.

42.

A spatio-temporal assessment of simian/human immunodeficiency virus (SHIV) evolution reveals a highly dynamic process within the host.

Feder AF, Kline C, Polacino P, Cottrell M, Kashuba ADM, Keele BF, Hu SL, Petrov DA, Pennings PS, Ambrose Z.

PLoS Pathog. 2017 May 25;13(5):e1006358. doi: 10.1371/journal.ppat.1006358. eCollection 2017 May.

43.

A quantitative and multiplexed approach to uncover the fitness landscape of tumor suppression in vivo.

Rogers ZN, McFarland CD, Winters IP, Naranjo S, Chuang CH, Petrov D, Winslow MM.

Nat Methods. 2017 Jul;14(7):737-742. doi: 10.1038/nmeth.4297. Epub 2017 May 22.

44.

Targeting the Hsp90 C-terminal domain to induce allosteric inhibition and selective client downregulation.

Goode KM, Petrov DP, Vickman RE, Crist SA, Pascuzzi PE, Ratliff TL, Davisson VJ, Hazbun TR.

Biochim Biophys Acta Gen Subj. 2017 Aug;1861(8):1992-2006. doi: 10.1016/j.bbagen.2017.05.006. Epub 2017 May 8.

45.

Molecular Dynamics Simulations of the Standard Leonardite Humic Acid: Microscopic Analysis of the Structure and Dynamics.

Petrov D, Tunega D, Gerzabek MH, Oostenbrink C.

Environ Sci Technol. 2017 May 16;51(10):5414-5424. doi: 10.1021/acs.est.7b00266. Epub 2017 May 3.

46.

ALS Clinical Trials Review: 20 Years of Failure. Are We Any Closer to Registering a New Treatment?

Petrov D, Mansfield C, Moussy A, Hermine O.

Front Aging Neurosci. 2017 Mar 22;9:68. doi: 10.3389/fnagi.2017.00068. eCollection 2017. Review.

47.

Thirty-Day Readmission Rates Following Deep Brain Stimulation Surgery.

Ramayya AG, Abdullah KG, Mallela AN, Pierce JT, Thawani J, Petrov D, Baltuch GH.

Neurosurgery. 2017 Aug 1;81(2):259-267. doi: 10.1093/neuros/nyx019.

PMID:
28327899
48.

Five-Body Efimov Effect and Universal Pentamer in Fermionic Mixtures.

Bazak B, Petrov DS.

Phys Rev Lett. 2017 Feb 24;118(8):083002. doi: 10.1103/PhysRevLett.118.083002. Epub 2017 Feb 23.

PMID:
28282181
49.

Role of the pretreatment 18F-fluorodeoxyglucose positron emission tomography maximal standardized uptake value in predicting outcomes of colon liver metastases and that value's association with Beclin-1 expression.

Dimitrova EG, Chaushev BG, Conev NV, Kashlov JK, Zlatarov AK, Petrov DP, Popov HB, Stefanova NT, Klisarova AD, Bratoeva KZ, Donev IS.

Biosci Trends. 2017 May 23;11(2):221-228. doi: 10.5582/bst.2016.01205. Epub 2017 Feb 28.

50.

Soft Selective Sweeps in Evolutionary Rescue.

Wilson BA, Pennings PS, Petrov DA.

Genetics. 2017 Apr;205(4):1573-1586. doi: 10.1534/genetics.116.191478. Epub 2017 Feb 17.

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