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Items: 32

1.

Neutron scattering in the biological sciences: progress and prospects.

Ashkar R, Bilheux HZ, Bordallo H, Briber R, Callaway DJE, Cheng X, Chu XQ, Curtis JE, Dadmun M, Fenimore P, Fushman D, Gabel F, Gupta K, Herberle F, Heinrich F, Hong L, Katsaras J, Kelman Z, Kharlampieva E, Kneller GR, Kovalevsky A, Krueger S, Langan P, Lieberman R, Liu Y, Losche M, Lyman E, Mao Y, Marino J, Mattos C, Meilleur F, Moody P, Nickels JD, O'Dell WB, O'Neill H, Perez-Salas U, Peters J, Petridis L, Sokolov AP, Stanley C, Wagner N, Weinrich M, Weiss K, Wymore T, Zhang Y, Smith JC.

Acta Crystallogr D Struct Biol. 2018 Dec 1;74(Pt 12):1129-1168. doi: 10.1107/S2059798318017503. Epub 2018 Dec 20.

PMID:
30605130
2.

Dynamics of the lignin glass transition.

Vural D, Smith JC, Petridis L.

Phys Chem Chem Phys. 2018 Aug 8;20(31):20504-20512. doi: 10.1039/c8cp03144d.

PMID:
30046795
3.

Quantum Calculations on Plant Cell Wall Component Interactions.

Yang H, Watts HD, Gibilterra V, Weiss TB, Petridis L, Cosgrove DJ, Kubicki JD.

Interdiscip Sci. 2018 Mar 26. doi: 10.1007/s12539-018-0293-4. [Epub ahead of print]

PMID:
29582245
4.

Dynamic Neutron Scattering by Biological Systems.

Smith JC, Tan P, Petridis L, Hong L.

Annu Rev Biophys. 2018 May 20;47:335-354. doi: 10.1146/annurev-biophys-070317-033358. Epub 2018 Mar 21.

PMID:
29561628
5.

Relationship between lignocellulosic biomass dissolution and physicochemical properties of ionic liquids composed of 3-methylimidazolium cations and carboxylate anions.

Moyer P, Smith MD, Abdoulmoumine N, Chmely SC, Smith JC, Petridis L, Labbé N.

Phys Chem Chem Phys. 2018 Jan 24;20(4):2508-2516. doi: 10.1039/c7cp07195g.

PMID:
29313537
6.

Organosolv-Water Cosolvent Phase Separation on Cellulose and its Influence on the Physical Deconstruction of Cellulose: A Molecular Dynamics Analysis.

Smith MD, Cheng X, Petridis L, Mostofian B, Smith JC.

Sci Rep. 2017 Nov 3;7(1):14494. doi: 10.1038/s41598-017-15048-7.

7.

Dynamics of water bound to crystalline cellulose.

O'Neill H, Pingali SV, Petridis L, He J, Mamontov E, Hong L, Urban V, Evans B, Langan P, Smith JC, Davison BH.

Sci Rep. 2017 Sep 19;7(1):11840. doi: 10.1038/s41598-017-12035-w.

8.

Dynamics at a Peptide-TiO2 Anatase (101) Interface.

Polimeni M, Petridis L, Smith JC, Arcangeli C.

J Phys Chem B. 2017 Sep 28;121(38):8869-8877. doi: 10.1021/acs.jpcb.7b04707. Epub 2017 Sep 14.

PMID:
28851213
9.

Middle-aged Female Depression in Perimenopausal Period and Square Dance Intervention.

Gao L, Zhang L, Qi H, Petridis L.

Psychiatr Danub. 2016 Dec;28(4):372-378.

10.

Local Phase Separation of Co-solvents Enhances Pretreatment of Biomass for Bioenergy Applications.

Mostofian B, Cai CM, Smith MD, Petridis L, Cheng X, Wyman CE, Smith JC.

J Am Chem Soc. 2016 Aug 31;138(34):10869-78. doi: 10.1021/jacs.6b03285. Epub 2016 Aug 22.

PMID:
27482599
11.

Relative Binding Affinities of Monolignols to Horseradish Peroxidase.

Sangha AK, Petridis L, Cheng X, Smith JC.

J Phys Chem B. 2016 Aug 11;120(31):7635-40. doi: 10.1021/acs.jpcb.6b00789. Epub 2016 Aug 1.

PMID:
27447548
12.

Enhanced sampling simulation analysis of the structure of lignin in the THF-water miscibility gap.

Smith MD, Petridis L, Cheng X, Mostofian B, Smith JC.

Phys Chem Chem Phys. 2016 Mar 7;18(9):6394-8. doi: 10.1039/c5cp07088k. Epub 2016 Feb 10.

PMID:
26862597
13.

Conformations of Low-Molecular-Weight Lignin Polymers in Water.

Petridis L, Smith JC.

ChemSusChem. 2016 Feb 8;9(3):289-95. doi: 10.1002/cssc.201501350. Epub 2016 Jan 13.

PMID:
26763657
14.

Molecular Driving Forces behind the Tetrahydrofuran-Water Miscibility Gap.

Smith MD, Mostofian B, Petridis L, Cheng X, Smith JC.

J Phys Chem B. 2016 Feb 4;120(4):740-7. doi: 10.1021/acs.jpcb.5b09770. Epub 2016 Jan 20.

PMID:
26734991
15.

Mechanism of lignin inhibition of enzymatic biomass deconstruction.

Vermaas JV, Petridis L, Qi X, Schulz R, Lindner B, Smith JC.

Biotechnol Biofuels. 2015 Dec 21;8:217. doi: 10.1186/s13068-015-0379-8. eCollection 2015.

16.

A Structural Study of CESA1 Catalytic Domain of Arabidopsis Cellulose Synthesis Complex: Evidence for CESA Trimers.

Vandavasi VG, Putnam DK, Zhang Q, Petridis L, Heller WT, Nixon BT, Haigler CH, Kalluri U, Coates L, Langan P, Smith JC, Meiler J, O'Neill H.

Plant Physiol. 2016 Jan;170(1):123-35. doi: 10.1104/pp.15.01356. Epub 2015 Nov 10.

17.

Investigation of Carbohydrate Recognition via Computer Simulation.

Johnson QR, Lindsay RJ, Petridis L, Shen T.

Molecules. 2015 Apr 28;20(5):7700-18. doi: 10.3390/molecules20057700. Review.

18.

The role of histone tails in the nucleosome: a computational study.

Erler J, Zhang R, Petridis L, Cheng X, Smith JC, Langowski J.

Biophys J. 2014 Dec 16;107(12):2911-2922. doi: 10.1016/j.bpj.2014.10.065.

19.

Why genetic modification of lignin leads to low-recalcitrance biomass.

Carmona C, Langan P, Smith JC, Petridis L.

Phys Chem Chem Phys. 2015 Jan 7;17(1):358-64. doi: 10.1039/c4cp05004e.

PMID:
25384960
20.

Hydration control of the mechanical and dynamical properties of cellulose.

Petridis L, O'Neill HM, Johnsen M, Fan B, Schulz R, Mamontov E, Maranas J, Langan P, Smith JC.

Biomacromolecules. 2014 Nov 10;15(11):4152-9. doi: 10.1021/bm5011849. Epub 2014 Oct 29.

PMID:
25325376
21.

Determination of cellulose crystallinity from powder diffraction diagrams.

Lindner B, Petridis L, Langan P, Smith JC.

Biopolymers. 2015 Feb;103(2):67-73. doi: 10.1002/bip.22555.

PMID:
25269646
22.

Spatial arrangement of organic compounds on a model mineral surface: implications for soil organic matter stabilization.

Petridis L, Ambaye H, Jagadamma S, Kilbey SM 2nd, Lokitz BS, Lauter V, Mayes MA.

Environ Sci Technol. 2014;48(1):79-84. doi: 10.1021/es403430k. Epub 2013 Dec 18.

PMID:
24328330
23.

Solvent-driven preferential association of lignin with regions of crystalline cellulose in molecular dynamics simulation.

Lindner B, Petridis L, Schulz R, Smith JC.

Biomacromolecules. 2013 Oct 14;14(10):3390-8. doi: 10.1021/bm400442n. Epub 2013 Sep 26.

PMID:
23980921
24.

The effects of a water polo game on the blood redox status of male water polo players.

Petridis L, Jamurtas AZ, Veskoukis A, Kouretas D.

J Sports Med Phys Fitness. 2013 Oct;53(5):551-8.

PMID:
23903536
25.

Simulation analysis of the temperature dependence of lignin structure and dynamics.

Petridis L, Schulz R, Smith JC.

J Am Chem Soc. 2011 Dec 21;133(50):20277-87. doi: 10.1021/ja206839u. Epub 2011 Nov 28.

PMID:
22035184
26.

Self-similar multiscale structure of lignin revealed by neutron scattering and molecular dynamics simulation.

Petridis L, Pingali SV, Urban V, Heller WT, O'Neill HM, Foston M, Ragauskas A, Smith JC.

Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Jun;83(6 Pt 1):061911. Epub 2011 Jun 15. Erratum in: Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Jul;84(1 Pt 2):019905.

PMID:
21797407
27.

Small angle neutron scattering reveals pH-dependent conformational changes in Trichoderma reesei cellobiohydrolase I: implications for enzymatic activity.

Pingali SV, O'Neill HM, McGaughey J, Urban VS, Rempe CS, Petridis L, Smith JC, Evans BR, Heller WT.

J Biol Chem. 2011 Sep 16;286(37):32801-9. doi: 10.1074/jbc.M111.263004. Epub 2011 Jul 22.

28.

Scaling of Multimillion-Atom Biological Molecular Dynamics Simulation on a Petascale Supercomputer.

Schulz R, Lindner B, Petridis L, Smith JC.

J Chem Theory Comput. 2009 Oct 13;5(10):2798-808. doi: 10.1021/ct900292r.

PMID:
26631792
29.

Fitness test results of Hungarian and international-level soccer referees and assistants.

Bartha C, Petridis L, Hamar P, Puhl S, Castagna C.

J Strength Cond Res. 2009 Jan;23(1):121-6. doi: 10.1519/JSC.0b013e31818ebb84.

PMID:
19125100
30.

A molecular mechanics force field for lignin.

Petridis L, Smith JC.

J Comput Chem. 2009 Feb;30(3):457-67. doi: 10.1002/jcc.21075.

PMID:
18677707
31.

Nematic-isotropic transition with quenched disorder.

Petridis L, Terentjev EM.

Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Nov;74(5 Pt 1):051707. Epub 2006 Nov 17.

PMID:
17279926
32.

Echocardiographic characteristics in adolescent junior male athletes of different sport events.

Petridis L, Kneffel Z, Kispéter Z, Horváth P, Sidó Z, Pavlik G.

Acta Physiol Hung. 2004;91(2):99-109.

PMID:
15484710

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