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Items: 1 to 50 of 103

1.

The Solution Structure of CCL28 Reveals Structural Lability that Does Not Constrain Antifungal Activity.

Thomas MA, He J, Peterson FC, Huppler AR, Volkman BF.

J Mol Biol. 2018 Sep 14;430(18 Pt B):3266-3282. doi: 10.1016/j.jmb.2018.06.001. Epub 2018 Jun 15.

2.

Development and Validation of 2D Difference Intensity Analysis for Chemical Library Screening by Protein-Detected NMR Spectroscopy.

Egner JM, Jensen DR, Olp MD, Kennedy NW, Volkman BF, Peterson FC, Smith BC, Hill RB.

Chembiochem. 2018 Mar 2;19(5):448-458. doi: 10.1002/cbic.201700386. Epub 2018 Jan 25.

3.

Protein engineering of the chemokine CCL20 prevents psoriasiform dermatitis in an IL-23-dependent murine model.

Getschman AE, Imai Y, Larsen O, Peterson FC, Wu X, Rosenkilde MM, Hwang ST, Volkman BF.

Proc Natl Acad Sci U S A. 2017 Nov 21;114(47):12460-12465. doi: 10.1073/pnas.1704958114. Epub 2017 Nov 6.

4.

A Rationally Designed Agonist Defines Subfamily IIIA Abscisic Acid Receptors As Critical Targets for Manipulating Transpiration.

Vaidya AS, Peterson FC, Yarmolinsky D, Merilo E, Verstraeten I, Park SY, Elzinga D, Kaundal A, Helander J, Lozano-Juste J, Otani M, Wu K, Jensen DR, Kollist H, Volkman BF, Cutler SR.

ACS Chem Biol. 2017 Nov 17;12(11):2842-2848. doi: 10.1021/acschembio.7b00650. Epub 2017 Oct 18.

PMID:
28949512
5.

CCR7 Sulfotyrosine Enhances CCL21 Binding.

Phillips AJ, Taleski D, Koplinski CA, Getschman AE, Moussouras NA, Richard AM, Peterson FC, Dwinell MB, Volkman BF, Payne RJ, Veldkamp CT.

Int J Mol Sci. 2017 Aug 25;18(9). pii: E1857. doi: 10.3390/ijms18091857.

6.

Structure and Dimerization of IreB, a Negative Regulator of Cephalosporin Resistance in Enterococcus faecalis.

Hall CL, Lytle BL, Jensen D, Hoff JS, Peterson FC, Volkman BF, Kristich CJ.

J Mol Biol. 2017 Jul 21;429(15):2324-2336. doi: 10.1016/j.jmb.2017.05.019. Epub 2017 May 24.

7.

Structural basis for chemokine recognition by a G protein-coupled receptor and implications for receptor activation.

Ziarek JJ, Kleist AB, London N, Raveh B, Montpas N, Bonneterre J, St-Onge G, DiCosmo-Ponticello CJ, Koplinski CA, Roy I, Stephens B, Thelen S, Veldkamp CT, Coffman FD, Cohen MC, Dwinell MB, Thelen M, Peterson FC, Heveker N, Volkman BF.

Sci Signal. 2017 Mar 21;10(471). pii: eaah5756. doi: 10.1126/scisignal.aah5756.

8.

NMR Structure of the C-Terminal Transmembrane Domain of the HDL Receptor, SR-BI, and a Functionally Relevant Leucine Zipper Motif.

Chadwick AC, Jensen DR, Hanson PJ, Lange PT, Proudfoot SC, Peterson FC, Volkman BF, Sahoo D.

Structure. 2017 Mar 7;25(3):446-457. doi: 10.1016/j.str.2017.01.001. Epub 2017 Feb 2.

9.

Tyrosine-sulfated V2 peptides inhibit HIV-1 infection via coreceptor mimicry.

Cimbro R, Peterson FC, Liu Q, Guzzo C, Zhang P, Miao H, Van Ryk D, Ambroggio X, Hurt DE, De Gioia L, Volkman BF, Dolan MA, Lusso P.

EBioMedicine. 2016 Aug;10:45-54. doi: 10.1016/j.ebiom.2016.06.037. Epub 2016 Jun 26.

10.

Structure-Based Identification of Novel Ligands Targeting Multiple Sites within a Chemokine-G-Protein-Coupled-Receptor Interface.

Smith EW, Nevins AM, Qiao Z, Liu Y, Getschman AE, Vankayala SL, Kemp MT, Peterson FC, Li R, Volkman BF, Chen Y.

J Med Chem. 2016 May 12;59(9):4342-51. doi: 10.1021/acs.jmedchem.5b02042. Epub 2016 Apr 14.

11.

Correction to Binding of Crumbs to the Par-6 CRIB-PDZ Module Is Regulated by Cdc42.

Whitney DS, Peterson FC, Kittell AW, Egner JM, Prehoda KE, Volkman BF.

Biochemistry. 2016 Apr 5;55(13):2063. doi: 10.1021/acs.biochem.6b00254. Epub 2016 Mar 25. No abstract available.

12.

Production of Recombinant Chemokines and Validation of Refolding.

Veldkamp CT, Koplinski CA, Jensen DR, Peterson FC, Smits KM, Smith BL, Johnson SK, Lettieri C, Buchholz WG, Solheim JC, Volkman BF.

Methods Enzymol. 2016;570:539-65. doi: 10.1016/bs.mie.2015.09.031. Epub 2015 Nov 14.

13.

Binding of Crumbs to the Par-6 CRIB-PDZ Module Is Regulated by Cdc42.

Whitney DS, Peterson FC, Kittell AW, Egner JM, Prehoda KE, Volkman BF.

Biochemistry. 2016 Mar 15;55(10):1455-61. doi: 10.1021/acs.biochem.5b01342. Epub 2016 Mar 3. Erratum in: Biochemistry. 2016 Apr 5;55(13):2063.

14.

Examination of Glycosaminoglycan Binding Sites on the XCL1 Dimer.

Fox JC, Tyler RC, Peterson FC, Dyer DP, Zhang F, Linhardt RJ, Handel TM, Volkman BF.

Biochemistry. 2016 Mar 1;55(8):1214-25. doi: 10.1021/acs.biochem.5b01329. Epub 2016 Feb 17.

15.

Engineering Metamorphic Chemokine Lymphotactin/XCL1 into the GAG-Binding, HIV-Inhibitory Dimer Conformation.

Fox JC, Tyler RC, Guzzo C, Tuinstra RL, Peterson FC, Lusso P, Volkman BF.

ACS Chem Biol. 2015 Nov 20;10(11):2580-8. doi: 10.1021/acschembio.5b00542. Epub 2015 Sep 2.

16.

Solution Structure of CCL19 and Identification of Overlapping CCR7 and PSGL-1 Binding Sites.

Veldkamp CT, Kiermaier E, Gabel-Eissens SJ, Gillitzer ML, Lippner DR, DiSilvio FA, Mueller CJ, Wantuch PL, Chaffee GR, Famiglietti MW, Zgoba DM, Bailey AA, Bah Y, Engebretson SJ, Graupner DR, Lackner ER, LaRosa VD, Medeiros T, Olson ML, Phillips AJ, Pyles H, Richard AM, Schoeller SJ, Touzeau B, Williams LG, Sixt M, Peterson FC.

Biochemistry. 2015 Jul 14;54(27):4163-6. doi: 10.1021/acs.biochem.5b00560. Epub 2015 Jul 6.

17.

Crystal Structure and Functional Analyses of the Lectin Domain of Glucosidase II: Insights into Oligomannose Recognition.

Olson LJ, Orsi R, Peterson FC, Parodi AJ, Kim JJ, D'Alessio C, Dahms NM.

Biochemistry. 2015 Jul 7;54(26):4097-111. doi: 10.1021/acs.biochem.5b00256. Epub 2015 Jun 24.

18.

The aspartate-less receiver (ALR) domains: distribution, structure and function.

Maule AF, Wright DP, Weiner JJ, Han L, Peterson FC, Volkman BF, Silvaggi NR, Ulijasz AT.

PLoS Pathog. 2015 Apr 13;11(4):e1004795. doi: 10.1371/journal.ppat.1004795. eCollection 2015 Apr. Erratum in: PLoS Pathog. 2015 Jun;11(6):e1004951.

19.

Bacterial expression of the phosphodiester-binding site of the cation-independent mannose 6-phosphate receptor for crystallographic and NMR studies.

Olson LJ, Jensen DR, Volkman BF, Kim JJ, Peterson FC, Gundry RL, Dahms NM.

Protein Expr Purif. 2015 Jul;111:91-7. doi: 10.1016/j.pep.2015.04.002. Epub 2015 Apr 8.

20.

Agrochemical control of plant water use using engineered abscisic acid receptors.

Park SY, Peterson FC, Mosquna A, Yao J, Volkman BF, Cutler SR.

Nature. 2015 Apr 23;520(7548):545-8. doi: 10.1038/nature14123. Epub 2015 Feb 4.

PMID:
25652827
21.

Identification of a fourth mannose 6-phosphate binding site in the cation-independent mannose 6-phosphate receptor.

Olson LJ, Castonguay AC, Lasanajak Y, Peterson FC, Cummings RD, Smith DF, Dahms NM.

Glycobiology. 2015 Jun;25(6):591-606. doi: 10.1093/glycob/cwv001. Epub 2015 Jan 8.

22.

Structure-function analysis of CCL28 in the development of post-viral asthma.

Thomas MA, Buelow BJ, Nevins AM, Jones SE, Peterson FC, Gundry RL, Grayson MH, Volkman BF.

J Biol Chem. 2015 Feb 13;290(7):4528-36. doi: 10.1074/jbc.M114.627786. Epub 2015 Jan 2.

23.

Expression, purification and reconstitution of the C-terminal transmembrane domain of scavenger receptor BI into detergent micelles for NMR analysis.

Chadwick AC, Jensen DR, Peterson FC, Volkman BF, Sahoo D.

Protein Expr Purif. 2015 Mar;107:35-42. doi: 10.1016/j.pep.2014.11.001. Epub 2014 Nov 12.

24.

Structural analysis of a novel small molecule ligand bound to the CXCL12 chemokine.

Smith EW, Liu Y, Getschman AE, Peterson FC, Ziarek JJ, Li R, Volkman BF, Chen Y.

J Med Chem. 2014 Nov 26;57(22):9693-9. doi: 10.1021/jm501194p. Epub 2014 Nov 13.

25.

The solution structure of the forkhead box-O DNA binding domain of Brugia malayi DAF-16a.

Casper SK, Schoeller SJ, Zgoba DM, Phillips AJ, Morien TJ, Chaffee GR, Sackett PC, Peterson FC, Crossgrove K, Veldkamp CT.

Proteins. 2014 Dec;82(12):3490-6. doi: 10.1002/prot.24701. Epub 2014 Oct 21.

26.

Identification of the major ubiquitin-binding domain of the Pseudomonas aeruginosa ExoU A2 phospholipase.

Anderson DM, Feix JB, Monroe AL, Peterson FC, Volkman BF, Haas AL, Frank DW.

J Biol Chem. 2013 Sep 13;288(37):26741-52. doi: 10.1074/jbc.M113.478529. Epub 2013 Aug 1.

27.

Recombinant leukemia inhibitory factor suppresses human medullary thyroid carcinoma cell line xenografts in mice.

Starenki D, Singh NK, Jensen DR, Peterson FC, Park JI.

Cancer Lett. 2013 Oct 1;339(1):144-51. doi: 10.1016/j.canlet.2013.07.006. Epub 2013 Jul 12.

28.

Activation of dimeric ABA receptors elicits guard cell closure, ABA-regulated gene expression, and drought tolerance.

Okamoto M, Peterson FC, Defries A, Park SY, Endo A, Nambara E, Volkman BF, Cutler SR.

Proc Natl Acad Sci U S A. 2013 Jul 16;110(29):12132-7. doi: 10.1073/pnas.1305919110. Epub 2013 Jul 1.

29.

Allosteric activation of the Par-6 PDZ via a partial unfolding transition.

Whitney DS, Peterson FC, Kovrigin EL, Volkman BF.

J Am Chem Soc. 2013 Jun 26;135(25):9377-83. doi: 10.1021/ja400092a. Epub 2013 Jun 12.

30.

Structure of the lectin mannose 6-phosphate receptor homology (MRH) domain of glucosidase II, an enzyme that regulates glycoprotein folding quality control in the endoplasmic reticulum.

Olson LJ, Orsi R, Alculumbre SG, Peterson FC, Stigliano ID, Parodi AJ, D'Alessio C, Dahms NM.

J Biol Chem. 2013 Jun 7;288(23):16460-75. doi: 10.1074/jbc.M113.450239. Epub 2013 Apr 22.

31.

Fragment-based optimization of small molecule CXCL12 inhibitors for antagonizing the CXCL12/CXCR4 interaction.

Ziarek JJ, Liu Y, Smith E, Zhang G, Peterson FC, Chen J, Yu Y, Chen Y, Volkman BF, Li R.

Curr Top Med Chem. 2012;12(24):2727-40.

32.

Solution structure of the cold-shock-like protein from Rickettsia rickettsii.

Gerarden KP, Fuchs AM, Koch JM, Mueller MM, Graupner DR, O'Rorke JT, Frost CD, Heinen HA, Lackner ER, Schoeller SJ, House PG, Peterson FC, Veldkamp CT.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Nov 1;68(Pt 11):1284-8. doi: 10.1107/S174430911203881X. Epub 2012 Oct 26.

33.

Electrostatic optimization of the conformational energy landscape in a metamorphic protein.

Tyler RC, Wieting JC, Peterson FC, Volkman BF.

Biochemistry. 2012 Nov 13;51(45):9067-75. doi: 10.1021/bi300842j. Epub 2012 Nov 2.

34.

Unfolding of the C-terminal domain of the J-protein Zuo1 releases autoinhibition and activates Pdr1-dependent transcription.

Ducett JK, Peterson FC, Hoover LA, Prunuske AJ, Volkman BF, Craig EA.

J Mol Biol. 2013 Jan 9;425(1):19-31. doi: 10.1016/j.jmb.2012.09.020. Epub 2012 Oct 2.

35.

E2-binding surface on Uba3 β-grasp domain undergoes a conformational transition.

Elgin ES, Sökmen N, Peterson FC, Volkman BF, Dağ C, Haas AL.

Proteins. 2012 Oct;80(10):2482-7. doi: 10.1002/prot.24148. Epub 2012 Jul 31.

PMID:
22821745
36.

Tyrosine residues mediate fibril formation in a dynamic light chain dimer interface.

DiCostanzo AC, Thompson JR, Peterson FC, Volkman BF, Ramirez-Alvarado M.

J Biol Chem. 2012 Aug 10;287(33):27997-8006. doi: 10.1074/jbc.M112.362921. Epub 2012 Jun 27.

37.

Solution structure of CCL21 and identification of a putative CCR7 binding site.

Love M, Sandberg JL, Ziarek JJ, Gerarden KP, Rode RR, Jensen DR, McCaslin DR, Peterson FC, Veldkamp CT.

Biochemistry. 2012 Jan 24;51(3):733-5. doi: 10.1021/bi201601k. Epub 2012 Jan 17.

38.

Potent and selective activation of abscisic acid receptors in vivo by mutational stabilization of their agonist-bound conformation.

Mosquna A, Peterson FC, Park SY, Lozano-Juste J, Volkman BF, Cutler SR.

Proc Natl Acad Sci U S A. 2011 Dec 20;108(51):20838-43. doi: 10.1073/pnas.1112838108. Epub 2011 Dec 2.

39.

A conformational switch in the CRIB-PDZ module of Par-6.

Whitney DS, Peterson FC, Volkman BF.

Structure. 2011 Nov 9;19(11):1711-22. doi: 10.1016/j.str.2011.07.018.

40.

Orphan macrodomain protein (human C6orf130) is an O-acyl-ADP-ribose deacylase: solution structure and catalytic properties.

Peterson FC, Chen D, Lytle BL, Rossi MN, Ahel I, Denu JM, Volkman BF.

J Biol Chem. 2011 Oct 14;286(41):35955-65. doi: 10.1074/jbc.M111.276238. Epub 2011 Aug 17.

41.

Native-state interconversion of a metamorphic protein requires global unfolding.

Tyler RC, Murray NJ, Peterson FC, Volkman BF.

Biochemistry. 2011 Aug 23;50(33):7077-9. doi: 10.1021/bi200750k. Epub 2011 Jul 26.

42.

Sulfotyrosine recognition as marker for druggable sites in the extracellular space.

Ziarek JJ, Heroux MS, Veldkamp CT, Peterson FC, Volkman BF.

Int J Mol Sci. 2011;12(6):3740-56. doi: 10.3390/ijms12063740. Epub 2011 Jun 8.

43.

Residues within a lipid-associated segment of the PECAM-1 cytoplasmic domain are susceptible to inducible, sequential phosphorylation.

Paddock C, Lytle BL, Peterson FC, Holyst T, Newman PJ, Volkman BF, Newman DK.

Blood. 2011 Jun 2;117(22):6012-23. doi: 10.1182/blood-2010-11-317867. Epub 2011 Apr 4.

44.

Binding site identification and structure determination of protein-ligand complexes by NMR a semiautomated approach.

Ziarek JJ, Peterson FC, Lytle BL, Volkman BF.

Methods Enzymol. 2011;493:241-75. doi: 10.1016/B978-0-12-381274-2.00010-8.

45.

Oxidation of histidine residues in copper-zinc superoxide dismutase by bicarbonate-stimulated peroxidase and thiol oxidase activities: pulse EPR and NMR studies.

Chandran K, McCracken J, Peterson FC, Antholine WE, Volkman BF, Kalyanaraman B.

Biochemistry. 2010 Dec 21;49(50):10616-22. doi: 10.1021/bi1010305. Epub 2010 Nov 23.

46.

Structural and functional insights into core ABA signaling.

Weiner JJ, Peterson FC, Volkman BF, Cutler SR.

Curr Opin Plant Biol. 2010 Oct;13(5):495-502. doi: 10.1016/j.pbi.2010.09.007. Epub 2010 Oct 9. Review.

47.

Structural basis for selective activation of ABA receptors.

Peterson FC, Burgie ES, Park SY, Jensen DR, Weiner JJ, Bingman CA, Chang CE, Cutler SR, Phillips GN Jr, Volkman BF.

Nat Struct Mol Biol. 2010 Sep;17(9):1109-13. doi: 10.1038/nsmb.1898. Epub 2010 Aug 22.

48.

Structural basis for recognition of phosphodiester-containing lysosomal enzymes by the cation-independent mannose 6-phosphate receptor.

Olson LJ, Peterson FC, Castonguay A, Bohnsack RN, Kudo M, Gotschall RR, Canfield WM, Volkman BF, Dahms NM.

Proc Natl Acad Sci U S A. 2010 Jul 13;107(28):12493-8. doi: 10.1073/pnas.1004232107. Epub 2010 Jun 30.

49.

A single mutation promotes amyloidogenicity through a highly promiscuous dimer interface.

Peterson FC, Baden EM, Owen BA, Volkman BF, Ramirez-Alvarado M.

Structure. 2010 May 12;18(5):563-70. doi: 10.1016/j.str.2010.02.012.

50.

Targeting SDF-1/CXCL12 with a ligand that prevents activation of CXCR4 through structure-based drug design.

Veldkamp CT, Ziarek JJ, Peterson FC, Chen Y, Volkman BF.

J Am Chem Soc. 2010 Jun 2;132(21):7242-3. doi: 10.1021/ja1002263.

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