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Items: 1 to 50 of 236

1.

Highlighting Clinical Metagenomics for Enhanced Diagnostic Decision-making: A Step Towards Wider Implementation.

Forbes JD, Knox NC, Peterson CL, Reimer AR.

Comput Struct Biotechnol J. 2018 Feb 27;16:108-120. doi: 10.1016/j.csbj.2018.02.006. eCollection 2018. Review.

2.

A sociological approach to resilience in health and illness.

Walker C, Peterson CL.

J Eval Clin Pract. 2018 Jun 14. doi: 10.1111/jep.12955. [Epub ahead of print]

PMID:
29901240
3.

Chromatin remodeling: a complex affair.

Gioacchini N, Peterson CL.

EMBO Rep. 2017 Oct;18(10):1673-1674. doi: 10.15252/embr.201744852. Epub 2017 Aug 23. No abstract available.

4.

Mot1, Ino80C, and NC2 Function Coordinately to Regulate Pervasive Transcription in Yeast and Mammals.

Xue Y, Pradhan SK, Sun F, Chronis C, Tran N, Su T, Van C, Vashisht A, Wohlschlegel J, Peterson CL, Timmers HTM, Kurdistani SK, Carey MF.

Mol Cell. 2017 Aug 17;67(4):594-607.e4. doi: 10.1016/j.molcel.2017.06.029. Epub 2017 Jul 20.

5.

Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes.

Clapier CR, Iwasa J, Cairns BR, Peterson CL.

Nat Rev Mol Cell Biol. 2017 Jul;18(7):407-422. doi: 10.1038/nrm.2017.26. Epub 2017 May 17. Review.

PMID:
28512350
6.

Nucleosomes influence multiple steps during replication initiation.

Azmi IF, Watanabe S, Maloney MF, Kang S, Belsky JA, MacAlpine DM, Peterson CL, Bell SP.

Elife. 2017 Mar 21;6. pii: e22512. doi: 10.7554/eLife.22512.

7.

Older people and knowledge of epilepsy: GPs can help.

Peterson CL, Piccenna L, Williams S, Batchelor F, Dow B, Shears G.

Aust Fam Physician. 2017 Mar;46(3):132-136.

8.

Voluntary activation of biceps-to-triceps and deltoid-to-triceps transfers in quadriplegia.

Peterson CL, Bednar MS, Bryden AM, Keith MW, Perreault EJ, Murray WM.

PLoS One. 2017 Mar 2;12(3):e0171141. doi: 10.1371/journal.pone.0171141. eCollection 2017.

9.

Nucleosome-like, Single-stranded DNA (ssDNA)-Histone Octamer Complexes and the Implication for DNA Double Strand Break Repair.

Adkins NL, Swygert SG, Kaur P, Niu H, Grigoryev SA, Sung P, Wang H, Peterson CL.

J Biol Chem. 2017 Mar 31;292(13):5271-5281. doi: 10.1074/jbc.M117.776369. Epub 2017 Feb 15.

10.

Posture-Dependent Corticomotor Excitability Differs Between the Transferred Biceps in Individuals With Tetraplegia and the Biceps of Nonimpaired Individuals.

Peterson CL, Rogers LM, Bednar MS, Bryden AM, Keith MW, Perreault EJ, Murray WM.

Neurorehabil Neural Repair. 2017 Apr;31(4):354-363. doi: 10.1177/1545968316680488. Epub 2016 Dec 8.

11.

Hsp90 and p23 Molecular Chaperones Control Chromatin Architecture by Maintaining the Functional Pool of the RSC Chromatin Remodeler.

Echtenkamp FJ, Gvozdenov Z, Adkins NL, Zhang Y, Lynch-Day M, Watanabe S, Peterson CL, Freeman BC.

Mol Cell. 2016 Dec 1;64(5):888-899. doi: 10.1016/j.molcel.2016.09.040. Epub 2016 Nov 3.

12.

Genomic Nucleosome Organization Reconstituted with Pure Proteins.

Krietenstein N, Wal M, Watanabe S, Park B, Peterson CL, Pugh BF, Korber P.

Cell. 2016 Oct 20;167(3):709-721.e12. doi: 10.1016/j.cell.2016.09.045.

13.

RNA polymerase II depletion promotes transcription of alternative mRNA species.

Yu L, Rege M, Peterson CL, Volkert MR.

BMC Mol Biol. 2016 Aug 30;17(1):20. doi: 10.1186/s12867-016-0074-8.

14.

Response to Comment on "A histone acetylation switch regulates H2A.Z deposition by the SWR-C remodeling enzyme".

Watanabe S, Peterson CL.

Science. 2016 Jul 22;353(6297):358. doi: 10.1126/science.aad6398.

15.

Multimorbidity: a sociological perspective of systems.

Walker C, Peterson CL.

J Eval Clin Pract. 2017 Feb;23(1):209-212. doi: 10.1111/jep.12599. Epub 2016 Jul 20.

PMID:
27440439
16.

Chromatin Dynamics and the RNA Exosome Function in Concert to Regulate Transcriptional Homeostasis.

Rege M, Subramanian V, Zhu C, Hsieh TH, Weiner A, Friedman N, Clauder-Münster S, Steinmetz LM, Rando OJ, Boyer LA, Peterson CL.

Cell Rep. 2015 Nov 24;13(8):1610-22. doi: 10.1016/j.celrep.2015.10.030. Epub 2015 Nov 12.

17.

A multilaboratory comparison of calibration accuracy and the performance of external references in analytical ultracentrifugation.

Zhao H, Ghirlando R, Alfonso C, Arisaka F, Attali I, Bain DL, Bakhtina MM, Becker DF, Bedwell GJ, Bekdemir A, Besong TM, Birck C, Brautigam CA, Brennerman W, Byron O, Bzowska A, Chaires JB, Chaton CT, Cölfen H, Connaghan KD, Crowley KA, Curth U, Daviter T, Dean WL, Díez AI, Ebel C, Eckert DM, Eisele LE, Eisenstein E, England P, Escalante C, Fagan JA, Fairman R, Finn RM, Fischle W, de la Torre JG, Gor J, Gustafsson H, Hall D, Harding SE, Cifre JG, Herr AB, Howell EE, Isaac RS, Jao SC, Jose D, Kim SJ, Kokona B, Kornblatt JA, Kosek D, Krayukhina E, Krzizike D, Kusznir EA, Kwon H, Larson A, Laue TM, Le Roy A, Leech AP, Lilie H, Luger K, Luque-Ortega JR, Ma J, May CA, Maynard EL, Modrak-Wojcik A, Mok YF, Mücke N, Nagel-Steger L, Narlikar GJ, Noda M, Nourse A, Obsil T, Park CK, Park JK, Pawelek PD, Perdue EE, Perkins SJ, Perugini MA, Peterson CL, Peverelli MG, Piszczek G, Prag G, Prevelige PE, Raynal BD, Rezabkova L, Richter K, Ringel AE, Rosenberg R, Rowe AJ, Rufer AC, Scott DJ, Seravalli JG, Solovyova AS, Song R, Staunton D, Stoddard C, Stott K, Strauss HM, Streicher WW, Sumida JP, Swygert SG, Szczepanowski RH, Tessmer I, Toth RT 4th, Tripathy A, Uchiyama S, Uebel SF, Unzai S, Gruber AV, von Hippel PH, Wandrey C, Wang SH, Weitzel SE, Wielgus-Kutrowska B, Wolberger C, Wolff M, Wright E, Wu YS, Wubben JM, Schuck P.

PLoS One. 2015 May 21;10(5):e0126420. doi: 10.1371/journal.pone.0126420. eCollection 2015.

18.

Structural analyses of the chromatin remodelling enzymes INO80-C and SWR-C.

Watanabe S, Tan D, Lakshminarasimhan M, Washburn MP, Hong EJ, Walz T, Peterson CL.

Nat Commun. 2015 May 12;6:7108. doi: 10.1038/ncomms8108.

19.

The Histone Chaperones FACT and Spt6 Restrict H2A.Z from Intragenic Locations.

Jeronimo C, Watanabe S, Kaplan CD, Peterson CL, Robert F.

Mol Cell. 2015 Jun 18;58(6):1113-23. doi: 10.1016/j.molcel.2015.03.030. Epub 2015 May 7.

20.

SWI/SNF recruitment to a DNA double-strand break by the NuA4 and Gcn5 histone acetyltransferases.

Bennett G, Peterson CL.

DNA Repair (Amst). 2015 Jun;30:38-45. doi: 10.1016/j.dnarep.2015.03.006. Epub 2015 Mar 25.

21.

The Ino80 complex prevents invasion of euchromatin into silent chromatin.

Xue Y, Van C, Pradhan SK, Su T, Gehrke J, Kuryan BG, Kitada T, Vashisht A, Tran N, Wohlschlegel J, Peterson CL, Kurdistani SK, Carey MF.

Genes Dev. 2015 Feb 15;29(4):350-5. doi: 10.1101/gad.256255.114.

22.

Posture-dependent changes in corticomotor excitability of the biceps after spinal cord injury and tendon transfer.

Peterson CL, Rogers LM, Mogk JP, Bednar MS, Bryden AM, Keith MW, Perreault EJ, Murray WM.

Conf Proc IEEE Eng Med Biol Soc. 2014;2014:4302-5. doi: 10.1109/EMBC.2014.6944576.

PMID:
25570944
23.

Deposition of histone H2A.Z by the SWR-C remodeling enzyme prevents genome instability.

Van C, Williams JS, Kunkel TA, Peterson CL.

DNA Repair (Amst). 2015 Jan;25:9-14. doi: 10.1016/j.dnarep.2014.10.010. Epub 2014 Nov 20.

24.

Direct interactions promote eviction of the Sir3 heterochromatin protein by the SWI/SNF chromatin remodeling enzyme.

Manning BJ, Peterson CL.

Proc Natl Acad Sci U S A. 2014 Dec 16;111(50):17827-32. doi: 10.1073/pnas.1420096111. Epub 2014 Dec 1.

25.

Solution-state conformation and stoichiometry of yeast Sir3 heterochromatin fibres.

Swygert SG, Manning BJ, Senapati S, Kaur P, Lindsay S, Demeler B, Peterson CL.

Nat Commun. 2014 Aug 28;5:4751. doi: 10.1038/ncomms5751.

26.

The social context of anxiety and depression: exploring the role of anxiety and depression in the lives of Australian adults with epilepsy.

Peterson CL, Walker C, Shears G.

Epilepsy Behav. 2014 May;34:29-33. doi: 10.1016/j.yebeh.2014.03.005. Epub 2014 Mar 25.

PMID:
24681382
27.

Chromatin dynamics: interplay between remodeling enzymes and histone modifications.

Swygert SG, Peterson CL.

Biochim Biophys Acta. 2014 Aug;1839(8):728-36. doi: 10.1016/j.bbagrm.2014.02.013. Epub 2014 Feb 28. Review.

28.

Phenotypic and genotypic characterization of Canadian clinical isolates of Vibrio parahaemolyticus collected from 2000 to 2009.

Banerjee SK, Kearney AK, Nadon CA, Peterson CL, Tyler K, Bakouche L, Clark CG, Hoang L, Gilmour MW, Farber JM.

J Clin Microbiol. 2014 Apr;52(4):1081-8. doi: 10.1128/JCM.03047-13. Epub 2014 Jan 22.

29.

Nucleosome dynamics as modular systems that integrate DNA damage and repair.

Peterson CL, Almouzni G.

Cold Spring Harb Perspect Biol. 2013 Sep 1;5(9). pii: a012658. doi: 10.1101/cshperspect.a012658. Review.

30.

Withdrawal reflexes in the upper limb adapt to arm posture and stimulus location.

Peterson CL, Riley ZA, Krepkovich ET, Murray WM, Perreault EJ.

Muscle Nerve. 2014 May;49(5):716-23. doi: 10.1002/mus.23987. Epub 2014 Feb 24.

PMID:
23929755
31.

PCR-mediated site-directed mutagenesis.

Carey MF, Peterson CL, Smale ST.

Cold Spring Harb Protoc. 2013 Aug 1;2013(8):738-42. doi: 10.1101/pdb.prot076505.

PMID:
23906918
32.

Chromatin dynamics: flipping the switch on a chromatin remodeling machine.

Watanabe S, Peterson CL.

Cell Cycle. 2013 Aug 1;12(15):2337-8. doi: 10.4161/cc.25704. Epub 2013 Jul 11. No abstract available.

33.

Electrophoretic mobility-shift assays.

Carey MF, Peterson CL, Smale ST.

Cold Spring Harb Protoc. 2013 Jul 1;2013(7):636-9. doi: 10.1101/pdb.prot075861.

PMID:
23818676
34.

DNA repair choice defines a common pathway for recruitment of chromatin regulators.

Bennett G, Papamichos-Chronakis M, Peterson CL.

Nat Commun. 2013;4:2084. doi: 10.1038/ncomms3084.

35.

Nucleosome dynamics regulates DNA processing.

Adkins NL, Niu H, Sung P, Peterson CL.

Nat Struct Mol Biol. 2013 Jul;20(7):836-42. doi: 10.1038/nsmb.2585. Epub 2013 Jun 2.

36.

Preparation of (32)P-end-labeled DNA fragments for performing DNA-binding experiments.

Carey MF, Peterson CL, Smale ST.

Cold Spring Harb Protoc. 2013 May 1;2013(5):464-8. doi: 10.1101/pdb.prot074336.

PMID:
23637369
37.

DNase I footprinting.

Carey MF, Peterson CL, Smale ST.

Cold Spring Harb Protoc. 2013 May 1;2013(5):469-78. doi: 10.1101/pdb.prot074328.

PMID:
23637368
38.

Parent genotype and environmental factors influence introduction success of the critically endangered Savannas Mint (Dicerandra immaculata var. savannarum).

Peterson CL, Kaufmann GS, Vandello C, Richardson ML.

PLoS One. 2013 Apr 9;8(4):e61429. doi: 10.1371/journal.pone.0061429. Print 2013.

39.

A histone acetylation switch regulates H2A.Z deposition by the SWR-C remodeling enzyme.

Watanabe S, Radman-Livaja M, Rando OJ, Peterson CL.

Science. 2013 Apr 12;340(6129):195-9. doi: 10.1126/science.1229758.

40.

The RNase protection assay.

Carey MF, Peterson CL, Smale ST.

Cold Spring Harb Protoc. 2013 Mar 1;2013(3). pii: pdb.prot071910. doi: 10.1101/pdb.prot071910.

PMID:
23457339
41.

The primer extension assay.

Carey MF, Peterson CL, Smale ST.

Cold Spring Harb Protoc. 2013 Feb 1;2013(2):164-73. doi: 10.1101/pdb.prot071902.

PMID:
23378648
42.

Releasing the brakes on a chromatin-remodeling enzyme.

Manning BJ, Peterson CL.

Nat Struct Mol Biol. 2013 Jan;20(1):5-7. doi: 10.1038/nsmb.2482.

PMID:
23288358
43.

Chromatin and the genome integrity network.

Papamichos-Chronakis M, Peterson CL.

Nat Rev Genet. 2013 Jan;14(1):62-75. doi: 10.1038/nrg3345. Review.

44.

Confirming the functional importance of a protein-DNA interaction.

Carey MF, Peterson CL, Smale ST.

Cold Spring Harb Protoc. 2012 Jul 1;2012(7):733-57. doi: 10.1101/pdb.top070060.

PMID:
22753608
45.

Chromatin remodeling by the SWI/SNF complex is essential for transcription mediated by the yeast cell wall integrity MAPK pathway.

Sanz AB, García R, Rodríguez-Peña JM, Díez-Muñiz S, Nombela C, Peterson CL, Arroyo J.

Mol Biol Cell. 2012 Jul;23(14):2805-17. doi: 10.1091/mbc.E12-04-0278. Epub 2012 May 23.

46.

Identifying cis-acting DNA elements within a control region.

Carey MF, Peterson CL, Smale ST.

Cold Spring Harb Protoc. 2012 Mar 1;2012(3):279-96. doi: 10.1101/pdb.top068171. Review.

PMID:
22383646
47.

Experimental strategies for cloning or identifying genes encoding DNA-binding proteins.

Carey MF, Peterson CL, Smale ST.

Cold Spring Harb Protoc. 2012 Feb 1;2012(2):183-92. doi: 10.1101/pdb.top067900.

PMID:
22301659
48.

Experimental strategies for the identification of DNA-binding proteins.

Carey MF, Peterson CL, Smale ST.

Cold Spring Harb Protoc. 2012 Jan 1;2012(1):18-33. doi: 10.1101/pdb.top067470. Review.

PMID:
22194258
49.

SWI/SNF- and RSC-catalyzed nucleosome mobilization requires internal DNA loop translocation within nucleosomes.

Liu N, Peterson CL, Hayes JJ.

Mol Cell Biol. 2011 Oct;31(20):4165-75. doi: 10.1128/MCB.05605-11. Epub 2011 Aug 22.

50.

Muscle work is increased in pre-swing during hemiparetic walking.

Peterson CL, Kautz SA, Neptune RR.

Clin Biomech (Bristol, Avon). 2011 Oct;26(8):859-66. doi: 10.1016/j.clinbiomech.2011.04.010. Epub 2011 May 24.

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