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Items: 1 to 50 of 72

1.

Entrainment of a cellular circadian oscillator by light in the presence of molecular noise.

Wang G, Peskin CS.

Phys Rev E. 2018 Jun;97(6-1):062416. doi: 10.1103/PhysRevE.97.062416.

PMID:
30011522
2.

Spontaneous oscillation and fluid-structure interaction of cilia.

Han J, Peskin CS.

Proc Natl Acad Sci U S A. 2018 Apr 24;115(17):4417-4422. doi: 10.1073/pnas.1712042115. Epub 2018 Apr 9.

3.

Image-based model of the spectrin cytoskeleton for red blood cell simulation.

Fai TG, Leo-Macias A, Stokes DL, Peskin CS.

PLoS Comput Biol. 2017 Oct 9;13(10):e1005790. doi: 10.1371/journal.pcbi.1005790. eCollection 2017 Oct.

4.

Modeling polymorphic transformation of rotating bacterial flagella in a viscous fluid.

Ko W, Lim S, Lee W, Kim Y, Berg HC, Peskin CS.

Phys Rev E. 2017 Jun;95(6-1):063106. doi: 10.1103/PhysRevE.95.063106. Epub 2017 Jun 14.

5.

Modeling and high-throughput experimental data uncover the mechanisms underlying Fshb gene sensitivity to gonadotropin-releasing hormone pulse frequency.

Stern E, Ruf-Zamojski F, Zalepa-King L, Pincas H, Choi SG, Peskin CS, Hayot F, Turgeon JL, Sealfon SC.

J Biol Chem. 2017 Jun 9;292(23):9815-9829. doi: 10.1074/jbc.M117.783886. Epub 2017 Apr 6.

6.

Echocardiographic Linear Dimensions for Assessment of Right Ventricular Chamber Volume as Demonstrated by Cardiac Magnetic Resonance.

Kim J, Srinivasan A, Seoane T, Di Franco A, Peskin CS, McQueen DM, Paul TK, Feher A, Geevarghese A, Rozenstrauch M, Devereux RB, Weinsaft JW.

J Am Soc Echocardiogr. 2016 Sep;29(9):861-70. doi: 10.1016/j.echo.2016.05.002. Epub 2016 Jun 11.

7.

A Mathematical Model of Granule Cell Generation During Mouse Cerebellum Development.

Leffler SR, Legué E, Aristizábal O, Joyner AL, Peskin CS, Turnbull DH.

Bull Math Biol. 2016 May;78(5):859-78. doi: 10.1007/s11538-016-0163-3. Epub 2016 Apr 28.

8.

Stochastic entrainment of a stochastic oscillator.

Wang G, Peskin CS.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015;92(5):052718. doi: 10.1103/PhysRevE.92.052718. Epub 2015 Nov 25.

PMID:
26651734
9.

Improved signaling as a result of randomness in synaptic vesicle release.

Zhang C, Peskin CS.

Proc Natl Acad Sci U S A. 2015 Dec 1;112(48):14954-9. doi: 10.1073/pnas.1513160112. Epub 2015 Nov 16.

10.

Numerical simulation of blood flow and pressure drop in the pulmonary arterial and venous circulation.

Qureshi MU, Vaughan GD, Sainsbury C, Johnson M, Peskin CS, Olufsen MS, Hill NA.

Biomech Model Mechanobiol. 2014 Oct;13(5):1137-54. doi: 10.1007/s10237-014-0563-y. Epub 2014 Mar 9.

11.

Computer simulation of voltage sensitive calcium ion channels in a dendritic spine.

Lee P, Sobie EA, Peskin CS.

J Theor Biol. 2013 Dec 7;338:87-93. doi: 10.1016/j.jtbi.2013.08.019. Epub 2013 Aug 30.

12.

The influence of spatial variation in chromatin density determined by X-ray tomograms on the time to find DNA binding sites.

Isaacson SA, Larabell CA, Le Gros MA, McQueen DM, Peskin CS.

Bull Math Biol. 2013 Nov;75(11):2093-117. doi: 10.1007/s11538-013-9883-9. Epub 2013 Aug 17.

13.

Population density approach for discrete mRNA distributions in generalized switching models for stochastic gene expression.

Stinchcombe AR, Peskin CS, Tranchina D.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Jun;85(6 Pt 1):061919. Epub 2012 Jun 22.

PMID:
23005139
14.

Fluid-mechanical interaction of flexible bacterial flagella by the immersed boundary method.

Lim S, Peskin CS.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Mar;85(3 Pt 2):036307. Epub 2012 Mar 19.

PMID:
22587180
15.

Synchrony and asynchrony for neuronal dynamics defined on complex networks.

Deville RE, Peskin CS.

Bull Math Biol. 2012 Apr;74(4):769-802. doi: 10.1007/s11538-011-9674-0. Epub 2011 Jul 14.

PMID:
21755391
16.

The influence of volume exclusion by chromatin on the time required to find specific DNA binding sites by diffusion.

Isaacson SA, McQueen DM, Peskin CS.

Proc Natl Acad Sci U S A. 2011 Mar 1;108(9):3815-20. doi: 10.1073/pnas.1018821108. Epub 2011 Feb 7.

17.

When the air hits your brain: cerebral autoregulation of brain oxygenation during aerobic exercise allows transient hyperoxygenation: case report.

Bollo RJ, Williams SC, Peskin CS, Samadani U.

Neurosurgery. 2010 Aug;67(2):E507-9. doi: 10.1227/01.NEU.0000371976.21043.C8.

PMID:
20644380
18.
19.

Quantitative theory of telomere length regulation and cellular senescence.

Rodriguez-Brenes IA, Peskin CS.

Proc Natl Acad Sci U S A. 2010 Mar 23;107(12):5387-92. doi: 10.1073/pnas.0914502107. Epub 2010 Mar 5.

20.

The Influence of Look-Ahead on the Error Rate of Transcription.

Yamada YR, Peskin CS.

Math Model Nat Phenom. 2010 Jan 27;5(3):206-227.

21.

Homogenization of an electrophysiological model for a strand of cardiac myocytes with gap-junctional and electric-field coupling.

Hand PE, Peskin CS.

Bull Math Biol. 2010 Aug;72(6):1408-24. doi: 10.1007/s11538-009-9499-2. Epub 2010 Jan 5.

PMID:
20049544
22.

Flexible clap and fling in tiny insect flight.

Miller LA, Peskin CS.

J Exp Biol. 2009 Oct 1;212(19):3076-90. doi: 10.1242/jeb.028662.

23.

A method for decoding the neurophysiological spike-response transform.

Stern E, García-Crescioni K, Miller MW, Peskin CS, Brezina V.

J Neurosci Methods. 2009 Nov 15;184(2):337-56. doi: 10.1016/j.jneumeth.2009.07.034. Epub 2009 Aug 18.

24.

Deriving macroscopic myocardial conductivities by homogenization of microscopic models.

Hand PE, Griffith BE, Peskin CS.

Bull Math Biol. 2009 Oct;71(7):1707-26. doi: 10.1007/s11538-009-9421-y. Epub 2009 May 2.

PMID:
19412638
25.

A look-ahead model for the elongation dynamics of transcription.

Yamada YR, Peskin CS.

Biophys J. 2009 Apr 22;96(8):3015-31. doi: 10.1016/j.bpj.2008.12.3955. Erratum in: Biophys J. 2010 Feb 17;98(4):741.

26.

Synchrony and asynchrony in a fully stochastic neural network.

DeVille RE, Peskin CS.

Bull Math Biol. 2008 Aug;70(6):1608-33. doi: 10.1007/s11538-008-9311-8. Epub 2008 May 30.

PMID:
18512106
27.

Ephaptic conduction in a cardiac strand model with 3D electrodiffusion.

Mori Y, Fishman GI, Peskin CS.

Proc Natl Acad Sci U S A. 2008 Apr 29;105(17):6463-8. doi: 10.1073/pnas.0801089105. Epub 2008 Apr 23.

28.

Effect of bundle branch block on cardiac output: a whole heart simulation study.

Vigmond EJ, Clements C, McQueen DM, Peskin CS.

Prog Biophys Mol Biol. 2008 Jun-Jul;97(2-3):520-42. doi: 10.1016/j.pbiomolbio.2008.02.022. Epub 2008 Mar 11.

PMID:
18384847
29.

Action potential duration gradient protects the right atrium from fibrillating.

Ridler M, McQueen DM, Peskin CS, Vigmond E.

Conf Proc IEEE Eng Med Biol Soc. 2006;1:3978-81.

PMID:
17947064
30.
31.

Decoding modulation of the neuromuscular transform.

Stern E, Fort TJ, Miller MW, Peskin CS, Brezina V.

Neurocomputing. 2007 Jun 1;70(10):1753-1758.

32.

Stochastic mRNA synthesis in mammalian cells.

Raj A, Peskin CS, Tranchina D, Vargas DY, Tyagi S.

PLoS Biol. 2006 Oct;4(10):e309.

33.
34.

The influence of chromosome flexibility on chromosome transport during anaphase A.

Raj A, Peskin CS.

Proc Natl Acad Sci U S A. 2006 Apr 4;103(14):5349-54. Epub 2006 Mar 27.

35.

A computational fluid dynamics of 'clap and fling' in the smallest insects.

Miller LA, Peskin CS.

J Exp Biol. 2005 Jan;208(Pt 2):195-212.

36.

Stochastic simulation of the mammalian circadian clock.

Forger DB, Peskin CS.

Proc Natl Acad Sci U S A. 2005 Jan 11;102(2):321-4. Epub 2004 Dec 30.

37.

Model based conjectures on mammalian clock controversies.

Forger DB, Peskin CS.

J Theor Biol. 2004 Oct 21;230(4):533-9.

PMID:
15363674
38.

When vortices stick: an aerodynamic transition in tiny insect flight.

Miller LA, Peskin CS.

J Exp Biol. 2004 Aug;207(Pt 17):3073-88.

39.

Development and validation of computational models for mammalian circadian oscillators.

Forger DB, Dean DA 2nd, Gurdziel K, Leloup JC, Lee C, Von Gall C, Etchegaray JP, Kronauer RE, Goldbeter A, Peskin CS, Jewett ME, Weaver DR.

OMICS. 2003 Winter;7(4):387-400.

PMID:
14683611
40.

A detailed predictive model of the mammalian circadian clock.

Forger DB, Peskin CS.

Proc Natl Acad Sci U S A. 2003 Dec 9;100(25):14806-11. Epub 2003 Dec 1.

41.

A robust numerical algorithm for studying biomolecular transport processes.

Wang H, Peskin CS, Elston TC.

J Theor Biol. 2003 Apr 21;221(4):491-511.

PMID:
12713936
42.

A mathematical study of volume shifts and ionic concentration changes during ischemia and hypoxia.

Yi CS, Fogelson AL, Keener JP, Peskin CS.

J Theor Biol. 2003 Jan 7;220(1):83-106.

PMID:
12453453
43.

Numerical analysis of the flux and force generated by a correlation ratchet mechanism.

Chiu C, Peskin CS.

J Math Biol. 2002 May;44(5):479-501.

PMID:
12021986
44.

Numerical simulation and experimental validation of blood flow in arteries with structured-tree outflow conditions.

Olufsen MS, Peskin CS, Kim WY, Pedersen EM, Nadim A, Larsen J.

Ann Biomed Eng. 2000 Nov-Dec;28(11):1281-99.

PMID:
11212947
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49.

Coordinated hydrolysis explains the mechanical behavior of kinesin.

Peskin CS, Oster G.

Biophys J. 1995 Apr;68(4 Suppl):202S-210S; discussion 210S-211S.

50.

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