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Parasite microbiome project: Grand challenges.

Dheilly NM, Martínez Martínez J, Rosario K, Brindley PJ, Fichorova RN, Kaye JZ, Kohl KD, Knoll LJ, Lukeš J, Perkins SL, Poulin R, Schriml L, Thompson LR.

PLoS Pathog. 2019 Oct 10;15(10):e1008028. doi: 10.1371/journal.ppat.1008028. eCollection 2019 Oct. No abstract available.


Metatranscriptomics yields new genomic resources and sensitive detection of infections for diverse blood parasites.

Galen SC, Borner J, Williamson JL, Witt CC, Perkins SL.

Mol Ecol Resour. 2019 Sep 11. doi: 10.1111/1755-0998.13091. [Epub ahead of print]


Evolutionary lability of host associations promotes phylogenetic overdispersion of co-infecting blood parasites.

Galen SC, Speer KA, Perkins SL.

J Anim Ecol. 2019 Aug 13. doi: 10.1111/1365-2656.13089. [Epub ahead of print]


The Influence of Aspiration Volume on the Number of Osteoblastic Progenitors Obtained From Bone Marrow in Children.

Yandow SM, Van de Velde SK, Siebert J, Perkins SL.

J Pediatr Orthop. 2019 Aug;39(7):382-386. doi: 10.1097/BPO.0000000000000949.


IRF4 translocation status in pediatric follicular and diffuse large B-cell lymphoma patients enrolled in Children's Oncology Group trials.

Chisholm KM, Mohlman J, Liew M, Termuhlen A, Cairo MS, Gross TG, Perkins SL, Miles RR.

Pediatr Blood Cancer. 2019 Aug;66(8):e27770. doi: 10.1002/pbc.27770. Epub 2019 Apr 22.


Ibrutinib significantly inhibited Bruton's tyrosine kinase (BTK) phosphorylation,in-vitro proliferation and enhanced overall survival in a preclinical Burkitt lymphoma (BL) model.

Chu Y, Lee S, Shah T, Yin C, Barth M, Miles RR, Ayello J, Morris E, Harrison L, Van de Ven C, Galardy P, Goldman SC, Lim MS, Hermiston M, McAllister-Lucas LM, Giulino-Roth L, Perkins SL, Cairo MS.

Oncoimmunology. 2018 Oct 11;8(1):e1512455. doi: 10.1080/2162402X.2018.1512455. eCollection 2019.


Bats Are an Untapped System for Understanding Microbiome Evolution in Mammals.

Ingala MR, Simmons NB, Perkins SL.

mSphere. 2018 Sep 19;3(5). pii: e00397-18. doi: 10.1128/mSphere.00397-18. Review.


Excellent outcomes in children and adolescents with CNS+ Burkitt lymphoma or other mature B-NHL using only intrathecal and systemic chemoimmunotherapy: results from FAB/LMB96 and COG ANHL01P1.

Frazer JK, Li KJ, Galardy PJ, Perkins SL, Auperin A, Anderson JR, Pinkerton R, Buxton A, Gross TG, Michon J, Leverger G, Weinstein HJ, Harrison L, Shiramizu B, Barth MJ, Goldman SC, Patte C, Cairo MS.

Br J Haematol. 2019 Apr;185(2):374-377. doi: 10.1111/bjh.15520. Epub 2018 Aug 16. No abstract available.



Perkins SL.

J Parasitol. 2018 Aug 3. doi: 10.1645/18-114. [Epub ahead of print] No abstract available.


Phylogeny of Hepatocystis parasites of Australian flying foxes reveals distinct parasite clade.

Schaer J, McMichael L, Gordon AN, Russell D, Matuschewski K, Perkins SL, Field H, Power M.

Int J Parasitol Parasites Wildl. 2018 Jun 6;7(2):207-212. doi: 10.1016/j.ijppaw.2018.06.001. eCollection 2018 Aug.


Overall survival of children and adolescents with mature B cell non-Hodgkin lymphoma who had refractory or relapsed disease during or after treatment with FAB/LMB 96: A report from the FAB/LMB 96 study group.

Cairo M, Auperin A, Perkins SL, Pinkerton R, Harrison L, Goldman S, Patte C.

Br J Haematol. 2018 Sep;182(6):859-869. doi: 10.1111/bjh.15491. Epub 2018 Jul 9.


The polyphyly of Plasmodium: comprehensive phylogenetic analyses of the malaria parasites (order Haemosporida) reveal widespread taxonomic conflict.

Galen SC, Borner J, Martinsen ES, Schaer J, Austin CC, West CJ, Perkins SL.

R Soc Open Sci. 2018 May 23;5(5):171780. doi: 10.1098/rsos.171780. eCollection 2018 May.


Multiple origins of green blood in New Guinea lizards.

Rodriguez ZB, Perkins SL, Austin CC.

Sci Adv. 2018 May 16;4(5):eaao5017. doi: 10.1126/sciadv.aao5017. eCollection 2018 May.


Comparing Microbiome Sampling Methods in a Wild Mammal: Fecal and Intestinal Samples Record Different Signals of Host Ecology, Evolution.

Ingala MR, Simmons NB, Wultsch C, Krampis K, Speer KA, Perkins SL.

Front Microbiol. 2018 May 1;9:803. doi: 10.3389/fmicb.2018.00803. eCollection 2018.


Malaria in Farmed Ungulates: an Exciting New System for Comparative Parasitology.

Perkins SL.

mSphere. 2018 Apr 18;3(2). pii: e00161-18. doi: 10.1128/mSphere.00161-18. Print 2018 Apr 25.


Malaria parasites of long-tailed macaques in Sarawak, Malaysian Borneo: a novel species and demographic and evolutionary histories.

Nada Raja T, Hu TH, Zainudin R, Lee KS, Perkins SL, Singh B.

BMC Evol Biol. 2018 Apr 10;18(1):49. doi: 10.1186/s12862-018-1170-9.


MR imaging of magnetic ink patterns via off-resonance sensitivity.

Perkins SL, Daniel BL, Hargreaves BA.

Magn Reson Med. 2018 Nov;80(5):2017-2023. doi: 10.1002/mrm.27187. Epub 2018 Mar 30.


Lymphomatoid Granulomatosis in a 14-Year-Old Boy with Trisomy 21 and History of B-Lymphoblastic Leukemia/Lymphoma.

Matynia AP, Perkins SL, Li D.

Fetal Pediatr Pathol. 2018 Feb;37(1):7-14. doi: 10.1080/15513815.2017.1379042. Epub 2018 Jan 16.


Parasitaemia data and molecular characterization of Haemoproteus catharti from New World vultures (Cathartidae) reveals a novel clade of Haemosporida.

Yabsley MJ, Vanstreels RET, Martinsen ES, Wickson AG, Holland AE, Hernandez SM, Thompson AT, Perkins SL, West CJ, Bryan AL, Cleveland CA, Jolly E, Brown JD, McRuer D, Behmke S, Beasley JC.

Malar J. 2018 Jan 8;17(1):12. doi: 10.1186/s12936-017-2165-5.


Epauletted fruit bats display exceptionally high infections with a Hepatocystis species complex in South Sudan.

Schaer J, Perkins SL, Ejotre I, Vodzak ME, Matuschewski K, Reeder DM.

Sci Rep. 2017 Jul 31;7(1):6928. doi: 10.1038/s41598-017-07093-z.


Genetic evaluation of juvenile xanthogranuloma: genomic abnormalities are uncommon in solitary lesions, advanced cases may show more complexity.

Paxton CN, O'Malley DP, Bellizzi AM, Alkapalan D, Fedoriw Y, Hornick JL, Perkins SL, South ST, Andersen EF.

Mod Pathol. 2017 Sep;30(9):1234-1240. doi: 10.1038/modpathol.2017.50. Epub 2017 Jul 28.


Genomic analysis of follicular dendritic cell sarcoma by molecular inversion probe array reveals tumor suppressor-driven biology.

Andersen EF, Paxton CN, O'Malley DP, Louissaint A Jr, Hornick JL, Griffin GK, Fedoriw Y, Kim YS, Weiss LM, Perkins SL, South ST.

Mod Pathol. 2017 Sep;30(9):1321-1334. doi: 10.1038/modpathol.2017.34. Epub 2017 Jun 16.


Haemosporidian Parasites of Reptiles and Birds from Gabon, Central Africa.

Boundenga L, Perkins SL, Ollomo B, Rougeron V, Leroy EM, Renaud F, Prugnolle F.

J Parasitol. 2017 Aug;103(4):330-337. doi: 10.1645/16-118. Epub 2017 May 16.


Comparative genomic expression signatures of signal transduction pathways and targets in paediatric Burkitt lymphoma: a Children's Oncology Group report.

Lee S, Day NS, Miles RR, Perkins SL, Lim MS, Ayello J, van de Ven C, Harrison L, El-Mallawany NK, Goldman S, Cairo MS.

Br J Haematol. 2017 May;177(4):601-611. doi: 10.1111/bjh.14604. Epub 2017 May 4.


The effects of DLEU1 gene expression in Burkitt lymphoma (BL): potential mechanism of chemoimmunotherapy resistance in BL.

Lee S, Luo W, Shah T, Yin C, O'Connell T, Chung TH, Perkins SL, Miles RR, Ayello J, Morris E, Harrison L, van de Ven C, Cairo MS.

Oncotarget. 2017 Apr 25;8(17):27839-27853. doi: 10.18632/oncotarget.15711.


The Influence of Aspiration Volume on the Number of Osteoblastic Progenitors Obtained From Bone Marrow in Children.

Yandow SM, Van de Velde SK, Siebert J, Perkins SL.

J Pediatr Orthop. 2017 Jan 30. doi: 10.1097/BPO.0000000000000949. [Epub ahead of print]


Genomic characterization of pediatric B-lymphoblastic lymphoma and B-lymphoblastic leukemia using formalin-fixed tissues.

Meyer JA, Zhou D, Mason CC, Downie JM, Rodic V, Abromowitch M, Wistinghausen B, Termuhlen AM, Angiolillo AL, Perkins SL, Lones MA, Barnette P, Schiffman JD, Miles RR.

Pediatr Blood Cancer. 2017 Jul;64(7). doi: 10.1002/pbc.26363. Epub 2016 Dec 13.


A Modern Menagerie of Mammalian Malaria.

Perkins SL, Schaer J.

Trends Parasitol. 2016 Oct;32(10):772-782. doi: 10.1016/ Epub 2016 Aug 1. Review.


Clinical utility of next-generation sequencing in the diagnosis of hereditary haemolytic anaemias.

Agarwal AM, Nussenzveig RH, Reading NS, Patel JL, Sangle N, Salama ME, Prchal JT, Perkins SL, Yaish HM, Christensen RD.

Br J Haematol. 2016 Sep;174(5):806-14. doi: 10.1111/bjh.14131. Epub 2016 Jun 12.


Prognostic Impact of Tumor Microenvironment in Diffuse Large B-Cell Lymphoma Uniformly Treated With R-CHOP Chemotherapy.

Gomez-Gelvez JC, Salama ME, Perkins SL, Leavitt M, Inamdar KV.

Am J Clin Pathol. 2016 Apr;145(4):514-23. doi: 10.1093/ajcp/aqw034. Epub 2016 Apr 22.


Metformin-Induced Fixed-Drug Eruption Confirmed by Multiple Exposures.

Steber CJ, Perkins SL, Harris KB.

Am J Case Rep. 2016 Apr 8;17:231-4.


Current status and future directions of T-lymphoblastic lymphoma in children and adolescents.

Burkhardt B, Mueller S, Khanam T, Perkins SL.

Br J Haematol. 2016 May;173(4):545-59. doi: 10.1111/bjh.14017. Epub 2016 Mar 15. Review.


Hidden in plain sight: Cryptic and endemic malaria parasites in North American white-tailed deer (Odocoileus virginianus).

Martinsen ES, McInerney N, Brightman H, Ferebee K, Walsh T, McShea WJ, Forrester TD, Ware L, Joyner PH, Perkins SL, Latch EK, Yabsley MJ, Schall JJ, Fleischer RC.

Sci Adv. 2016 Feb 5;2(2):e1501486. doi: 10.1126/sciadv.1501486. eCollection 2016 Feb.


Bone Marrow Synoptic Reporting for Hematologic Neoplasms: Guideline From the College of American Pathologists Pathology and Laboratory Quality Center.

Sever C, Abbott CL, de Baca ME, Khoury JD, Perkins SL, Reichard KK, Taylor A, Terebelo HR, Colasacco C, Rumble RB, Thomas NE.

Arch Pathol Lab Med. 2016 Sep;140(9):932-49. doi: 10.5858/arpa.2015-0450-SA. Epub 2016 Feb 23.


Folic Acid Supplementation in Pregnancy and the Risk of Pre-Eclampsia-A Cohort Study.

Wen SW, Guo Y, Rodger M, White RR, Yang Q, Smith GN, Perkins SL, Walker MC.

PLoS One. 2016 Feb 22;11(2):e0149818. doi: 10.1371/journal.pone.0149818. eCollection 2016.


Rare Pediatric Non-Hodgkin Lymphomas: A Report From Children's Oncology Group Study ANHL 04B1.

O'Suoji C, Welch JJ, Perkins SL, Smith LM, Weitzman S, Simko SJ, Galardy PJ, Bollard CM, Gross TG, Termuhlen AM.

Pediatr Blood Cancer. 2016 May;63(5):794-800. doi: 10.1002/pbc.25881. Epub 2016 Jan 5.


Next-generation IgVH sequencing CLL-like monoclonal B-cell lymphocytosis reveals frequent oligoclonality and ongoing hypermutation.

Klinger M, Zheng J, Elenitoba-Johnson KS, Perkins SL, Faham M, Bahler DW.

Leukemia. 2016 May;30(5):1055-61. doi: 10.1038/leu.2015.351. Epub 2015 Dec 21.


Bats, Trypanosomes, and Triatomines in Ecuador: New Insights into the Diversity, Transmission, and Origins of Trypanosoma cruzi and Chagas Disease.

Pinto CM, Ocaña-Mayorga S, Tapia EE, Lobos SE, Zurita AP, Aguirre-Villacís F, MacDonald A, Villacís AG, Lima L, Teixeira MM, Grijalva MJ, Perkins SL.

PLoS One. 2015 Oct 14;10(10):e0139999. doi: 10.1371/journal.pone.0139999. eCollection 2015.


Increased frequency of co-existing JAK2 exon-12 or MPL exon-10 mutations in patients with low JAK2(V617F) allelic burden.

Nussenzveig RH, Pham HT, Perkins SL, Prchal JT, Agarwal AM, Salama ME.

Leuk Lymphoma. 2016;57(6):1429-35. doi: 10.3109/10428194.2015.1091932. Epub 2015 Dec 23.


Non-Hodgkin Lymphoma in Children and Adolescents: Progress Through Effective Collaboration, Current Knowledge, and Challenges Ahead.

Minard-Colin V, Brugières L, Reiter A, Cairo MS, Gross TG, Woessmann W, Burkhardt B, Sandlund JT, Williams D, Pillon M, Horibe K, Auperin A, Le Deley MC, Zimmerman M, Perkins SL, Raphael M, Lamant L, Klapper W, Mussolin L, Poirel HA, Macintyre E, Damm-Welk C, Rosolen A, Patte C.

J Clin Oncol. 2015 Sep 20;33(27):2963-74. doi: 10.1200/JCO.2014.59.5827. Epub 2015 Aug 24. Review.


Clonal reproduction shapes evolution in the lizard malaria parasite Plasmodium floridense.

Falk BG, Glor RE, Perkins SL.

Evolution. 2015 Jun;69(6):1584-1596. doi: 10.1111/evo.12683. Epub 2015 Jun 8.


International Pediatric Non-Hodgkin Lymphoma Response Criteria.

Sandlund JT, Guillerman RP, Perkins SL, Pinkerton CR, Rosolen A, Patte C, Reiter A, Cairo MS.

J Clin Oncol. 2015 Jun 20;33(18):2106-11. doi: 10.1200/JCO.2014.59.0745. Epub 2015 May 4.


Revised International Pediatric Non-Hodgkin Lymphoma Staging System.

Rosolen A, Perkins SL, Pinkerton CR, Guillerman RP, Sandlund JT, Patte C, Reiter A, Cairo MS.

J Clin Oncol. 2015 Jun 20;33(18):2112-8. doi: 10.1200/JCO.2014.59.7203. Epub 2015 May 4.


Impact of persistent minimal residual disease post-consolidation therapy in children and adolescents with advanced Burkitt leukaemia: a Children's Oncology Group Pilot Study Report.

Shiramizu B, Goldman S, Smith L, Agsalda-Garcia M, Galardy P, Perkins SL, Frazer JK, Sanger W, Anderson JR, Gross TG, Weinstein H, Harrison L, Barth MJ, Mussolin L, Cairo MS.

Br J Haematol. 2015 Aug;170(3):367-71. doi: 10.1111/bjh.13443. Epub 2015 Apr 8.


Uncommon non-Hodgkin lymphomas of childhood: pathological diagnosis, clinical features and treatment approaches.

Sandlund JT, Perkins SL.

Br J Haematol. 2015 Jun;169(5):631-46. doi: 10.1111/bjh.13359. Epub 2015 Apr 7. Review.


Clinicopathologic evaluation of MYC expression in primary mediastinal (thymic) large B-cell lymphoma.

Li KD, Miles R, Tripp SR, Glenn MJ, Perkins SL, Salama M.

Am J Clin Pathol. 2015 Apr;143(4):598-604. doi: 10.1309/AJCPKUG0UQO0HMDJ.


Nycteria parasites of Afrotropical insectivorous bats.

Schaer J, Reeder DM, Vodzak ME, Olival KJ, Weber N, Mayer F, Matuschewski K, Perkins SL.

Int J Parasitol. 2015 May;45(6):375-84. doi: 10.1016/j.ijpara.2015.01.008. Epub 2015 Mar 9.


A limited plasma cell flow cytometry panel with reflex CD138 immunohistochemistry is an optimal workflow process for evaluating plasma cell neoplasms in bone marrow specimens.

Chen ZW, Perkins SL, Weiss RL, Bahler DW, Hussong JW, Salama ME.

Am J Clin Pathol. 2015 Jan;143(1):78-83. doi: 10.1309/AJCP3HKHEN8DFIPO.


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