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Items: 5

1.

CHROMATIX: computing the functional landscape of many-body chromatin interactions in transcriptionally active loci from deconvolved single cells.

Perez-Rathke A, Sun Q, Wang B, Boeva V, Shao Z, Liang J.

Genome Biol. 2020 Jan 16;21(1):13. doi: 10.1186/s13059-019-1904-z.

2.

A General Method for Predicting Amino Acid Residues Experiencing Hydrogen Exchange.

Wang B, Perez-Rathke A, Li R, Liang J.

IEEE EMBS Int Conf Biomed Health Inform. 2018 Mar;2018:341-344. doi: 10.1109/BHI.2018.8333438. Epub 2018 Apr 9.

3.

Mechanism of OmpG pH-Dependent Gating from Loop Ensemble and Single Channel Studies.

Perez-Rathke A, Fahie MA, Chisholm C, Liang J, Chen M.

J Am Chem Soc. 2018 Jan 24;140(3):1105-1115. doi: 10.1021/jacs.7b11979. Epub 2018 Jan 11.

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5.

High Performance Multiple Sequence Alignment System for Pyrosequencing Reads from Multiple Reference Genomes.

Saeed F, Perez-Rathke A, Gwarnicki J, Berger-Wolf T, Khokhar A.

J Parallel Distrib Comput. 2012 Jan;72(1):83-93. Epub 2011 Sep 16.

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