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Items: 1 to 50 of 89


The atroviolacea Gene Encodes an R3-MYB Protein Repressing Anthocyanin Synthesis in Tomato Plants.

Colanero S, Perata P, Gonzali S.

Front Plant Sci. 2018 Jun 19;9:830. doi: 10.3389/fpls.2018.00830. eCollection 2018.


Transcriptome profiling of short-term response to chilling stress in tolerant and sensitive Oryza sativa ssp. Japonica seedlings.

Buti M, Pasquariello M, Ronga D, Milc JA, Pecchioni N, Ho VT, Pucciariello C, Perata P, Francia E.

Funct Integr Genomics. 2018 Jun 6. doi: 10.1007/s10142-018-0615-y. [Epub ahead of print]


The rice SUB1A gene: Making adaptation to submergence and post-submergence possible.

Perata P.

Plant Cell Environ. 2018 Apr;41(4):717-720. doi: 10.1111/pce.13122. Epub 2018 Jan 31. No abstract available.


Group VII Ethylene Response Factors in Arabidopsis: Regulation and Physiological Roles.

Giuntoli B, Perata P.

Plant Physiol. 2018 Feb;176(2):1143-1155. doi: 10.1104/pp.17.01225. Epub 2017 Dec 21. No abstract available.


Gene Regulation and Survival under Hypoxia Requires Starch Availability and Metabolism.

Loreti E, Valeri MC, Novi G, Perata P.

Plant Physiol. 2018 Feb;176(2):1286-1298. doi: 10.1104/pp.17.01002. Epub 2017 Oct 30.


Ascophyllum nodosum Seaweed Extract Alleviates Drought Stress in Arabidopsis by Affecting Photosynthetic Performance and Related Gene Expression.

Santaniello A, Scartazza A, Gresta F, Loreti E, Biasone A, Di Tommaso D, Piaggesi A, Perata P.

Front Plant Sci. 2017 Aug 3;8:1362. doi: 10.3389/fpls.2017.01362. eCollection 2017.


Age-dependent regulation of ERF-VII transcription factor activity in Arabidopsis thaliana.

Giuntoli B, Shukla V, Maggiorelli F, Giorgi FM, Lombardi L, Perata P, Licausi F.

Plant Cell Environ. 2017 Oct;40(10):2333-2346. doi: 10.1111/pce.13037. Epub 2017 Aug 30.


Functional Balancing of the Hypoxia Regulators RAP2.12 and HRA1 Takes Place in vivo in Arabidopsis thaliana Plants.

Giuntoli B, Licausi F, van Veen H, Perata P.

Front Plant Sci. 2017 Apr 25;8:591. doi: 10.3389/fpls.2017.00591. eCollection 2017.


Community recommendations on terminology and procedures used in flooding and low oxygen stress research.

Sasidharan R, Bailey-Serres J, Ashikari M, Atwell BJ, Colmer TD, Fagerstedt K, Fukao T, Geigenberger P, Hebelstrup KH, Hill RD, Holdsworth MJ, Ismail AM, Licausi F, Mustroph A, Nakazono M, Pedersen O, Perata P, Sauter M, Shih MC, Sorrell BK, Striker GG, van Dongen JT, Whelan J, Xiao S, Visser EJW, Voesenek LACJ.

New Phytol. 2017 Jun;214(4):1403-1407. doi: 10.1111/nph.14519. Epub 2017 Mar 9. No abstract available.


Phenotiki: an open software and hardware platform for affordable and easy image-based phenotyping of rosette-shaped plants.

Minervini M, Giuffrida MV, Perata P, Tsaftaris SA.

Plant J. 2017 Apr;90(1):204-216. doi: 10.1111/tpj.13472. Epub 2017 Mar 2.


Iodine biofortification of crops: agronomic biofortification, metabolic engineering and iodine bioavailability.

Gonzali S, Kiferle C, Perata P.

Curr Opin Biotechnol. 2017 Apr;44:16-26. doi: 10.1016/j.copbio.2016.10.004. Epub 2016 Oct 28. Review.


Plant responses to flooding stress.

Loreti E, van Veen H, Perata P.

Curr Opin Plant Biol. 2016 Oct;33:64-71. doi: 10.1016/j.pbi.2016.06.005. Epub 2016 Jun 18. Review.


New insights into reactive oxygen species and nitric oxide signalling under low oxygen in plants.

Pucciariello C, Perata P.

Plant Cell Environ. 2017 Apr;40(4):473-482. doi: 10.1111/pce.12715. Epub 2016 Apr 13. Review.


Tomato R2R3-MYB Proteins SlANT1 and SlAN2: Same Protein Activity, Different Roles.

Kiferle C, Fantini E, Bassolino L, Povero G, Spelt C, Buti S, Giuliano G, Quattrocchio F, Koes R, Perata P, Gonzali S.

PLoS One. 2015 Aug 26;10(8):e0136365. doi: 10.1371/journal.pone.0136365. eCollection 2015.


New mechanistic links between sugar and hormone signalling networks.

Ljung K, Nemhauser JL, Perata P.

Curr Opin Plant Biol. 2015 Jun;25:130-7. doi: 10.1016/j.pbi.2015.05.022. Epub 2015 Jun 2. Review.


Universal stress protein HRU1 mediates ROS homeostasis under anoxia.

Gonzali S, Loreti E, Cardarelli F, Novi G, Parlanti S, Pucciariello C, Bassolino L, Banti V, Licausi F, Perata P.

Nat Plants. 2015 Oct 12;1:15151. doi: 10.1038/nplants.2015.151.


A trihelix DNA binding protein counterbalances hypoxia-responsive transcriptional activation in Arabidopsis.

Giuntoli B, Lee SC, Licausi F, Kosmacz M, Oosumi T, van Dongen JT, Bailey-Serres J, Perata P.

PLoS Biol. 2014 Sep 16;12(9):e1001950. doi: 10.1371/journal.pbio.1001950. eCollection 2014 Sep.


Plant responses to flooding.

Pucciariello C, Voesenek LA, Perata P, Sasidharan R.

Front Plant Sci. 2014 May 23;5:226. doi: 10.3389/fpls.2014.00226. eCollection 2014. No abstract available.


A reassessment of the role of sucrose synthase in the hypoxic sucrose-ethanol transition in Arabidopsis.

Santaniello A, Loreti E, Gonzali S, Novi G, Perata P.

Plant Cell Environ. 2014 Oct;37(10):2294-302. doi: 10.1111/pce.12363. Epub 2014 Jun 2.


Plant cysteine oxidases control the oxygen-dependent branch of the N-end-rule pathway.

Weits DA, Giuntoli B, Kosmacz M, Parlanti S, Hubberten HM, Riegler H, Hoefgen R, Perata P, van Dongen JT, Licausi F.

Nat Commun. 2014 Mar 6;5:3425. doi: 10.1038/ncomms4425.


Accumulation of anthocyanins in tomato skin extends shelf life.

Bassolino L, Zhang Y, Schoonbeek HJ, Kiferle C, Perata P, Martin C.

New Phytol. 2013 Nov;200(3):650-5. doi: 10.1111/nph.12524. Epub 2013 Sep 18.


Nighttime sugar starvation orchestrates gibberellin biosynthesis and plant growth in Arabidopsis.

Paparelli E, Parlanti S, Gonzali S, Novi G, Mariotti L, Ceccarelli N, van Dongen JT, Kölling K, Zeeman SC, Perata P.

Plant Cell. 2013 Oct;25(10):3760-9. doi: 10.1105/tpc.113.115519. Epub 2013 Oct 4.


Tomato fruits: a good target for iodine biofortification.

Kiferle C, Gonzali S, Holwerda HT, Ibaceta RR, Perata P.

Front Plant Sci. 2013 Jun 27;4:205. doi: 10.3389/fpls.2013.00205. Print 2013.


Quiescence in rice submergence tolerance: an evolutionary hypothesis.

Pucciariello C, Perata P.

Trends Plant Sci. 2013 Jul;18(7):377-81. doi: 10.1016/j.tplants.2013.04.007. Epub 2013 May 21. Review.


Analysis of the role of the pyruvate decarboxylase gene family in Arabidopsis thaliana under low-oxygen conditions.

Mithran M, Paparelli E, Novi G, Perata P, Loreti E.

Plant Biol (Stuttg). 2014 Jan;16(1):28-34. doi: 10.1111/plb.12005. Epub 2013 Apr 10.


Iodine fortification of vegetables improves human iodine nutrition: in vivo evidence for a new model of iodine prophylaxis.

Tonacchera M, Dimida A, De Servi M, Frigeri M, Ferrarini E, De Marco G, Grasso L, Agretti P, Piaggi P, Aghini-Lombardi F, Perata P, Pinchera A, Vitti P.

J Clin Endocrinol Metab. 2013 Apr;98(4):E694-7. doi: 10.1210/jc.2012-3509. Epub 2013 Mar 12.


Low oxygen response mechanisms in green organisms.

Banti V, Giuntoli B, Gonzali S, Loreti E, Magneschi L, Novi G, Paparelli E, Parlanti S, Pucciariello C, Santaniello A, Perata P.

Int J Mol Sci. 2013 Feb 27;14(3):4734-61. doi: 10.3390/ijms14034734.


New role for an old rule: N-end rule-mediated degradation of ethylene responsive factor proteins governs low oxygen response in plants(F).

Licausi F, Pucciariello C, Perata P.

J Integr Plant Biol. 2013 Jan;55(1):31-9. doi: 10.1111/jipb.12011.


Misexpression of a chloroplast aspartyl protease leads to severe growth defects and alters carbohydrate metabolism in Arabidopsis.

Paparelli E, Gonzali S, Parlanti S, Novi G, Giorgi FM, Licausi F, Kosmacz M, Feil R, Lunn JE, Brust H, van Dongen JT, Steup M, Perata P.

Plant Physiol. 2012 Nov;160(3):1237-50. doi: 10.1104/pp.112.204016. Epub 2012 Sep 17.


Distinct mechanisms regulating gene expression coexist within the fermentative pathways in Chlamydomonas reinhardtii.

Swirsky Whitney LA, Novi G, Perata P, Loreti E.

ScientificWorldJournal. 2012;2012:565047. doi: 10.1100/2012/565047. Epub 2012 Jun 18.


How plants sense low oxygen.

Pucciariello C, Perata P.

Plant Signal Behav. 2012 Jul;7(7):813-6. doi: 10.4161/psb.20322. Epub 2012 Jul 1. Review.


SUB1A-dependent and -independent mechanisms are involved in the flooding tolerance of wild rice species.

Niroula RK, Pucciariello C, Ho VT, Novi G, Fukao T, Perata P.

Plant J. 2012 Oct;72(2):282-93. doi: 10.1111/j.1365-313X.2012.05078.x. Epub 2012 Jul 24.


Metabolic engineering of the iodine content in Arabidopsis.

Landini M, Gonzali S, Kiferle C, Tonacchera M, Agretti P, Dimida A, Vitti P, Alpi A, Pinchera A, Perata P.

Sci Rep. 2012;2:338. doi: 10.1038/srep00338. Epub 2012 Mar 27.


ROS signaling as common element in low oxygen and heat stresses.

Pucciariello C, Banti V, Perata P.

Plant Physiol Biochem. 2012 Oct;59:3-10. doi: 10.1016/j.plaphy.2012.02.016. Epub 2012 Mar 3. Review.


Reactive oxygen species-driven transcription in Arabidopsis under oxygen deprivation.

Pucciariello C, Parlanti S, Banti V, Novi G, Perata P.

Plant Physiol. 2012 May;159(1):184-96. doi: 10.1104/pp.111.191122. Epub 2012 Mar 13.


Making sense of low oxygen sensing.

Bailey-Serres J, Fukao T, Gibbs DJ, Holdsworth MJ, Lee SC, Licausi F, Perata P, Voesenek LA, van Dongen JT.

Trends Plant Sci. 2012 Mar;17(3):129-38. doi: 10.1016/j.tplants.2011.12.004. Epub 2012 Jan 24. Review.


A mutant in the ADH1 gene of Chlamydomonas reinhardtii elicits metabolic restructuring during anaerobiosis.

Magneschi L, Catalanotti C, Subramanian V, Dubini A, Yang W, Mus F, Posewitz MC, Seibert M, Perata P, Grossman AR.

Plant Physiol. 2012 Mar;158(3):1293-305. doi: 10.1104/pp.111.191569. Epub 2012 Jan 23.


Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization.

Licausi F, Kosmacz M, Weits DA, Giuntoli B, Giorgi FM, Voesenek LA, Perata P, van Dongen JT.

Nature. 2011 Oct 23;479(7373):419-22. doi: 10.1038/nature10536.


HRE-type genes are regulated by growth-related changes in internal oxygen concentrations during the normal development of potato (Solanum tuberosum) tubers.

Licausi F, Giorgi FM, Schmälzlin E, Usadel B, Perata P, van Dongen JT, Geigenberger P.

Plant Cell Physiol. 2011 Nov;52(11):1957-72. doi: 10.1093/pcp/pcr128. Epub 2011 Sep 27.


Proteomic identification of differentially expressed proteins in the anoxic rice coleoptile.

Sadiq I, Fanucchi F, Paparelli E, Alpi E, Bachi A, Alpi A, Perata P.

J Plant Physiol. 2011 Dec 15;168(18):2234-43. doi: 10.1016/j.jplph.2011.07.009. Epub 2011 Sep 13.


Regulatory interplay of the Sub1A and CIPK15 pathways in the regulation of α-amylase production in flooded rice plants.

Kudahettige NP, Pucciariello C, Parlanti S, Alpi A, Perata P.

Plant Biol (Stuttg). 2011 Jul;13(4):611-9. doi: 10.1111/j.1438-8677.2010.00415.x. Epub 2010 Dec 9.


Distinct mechanisms for aerenchyma formation in leaf sheaths of rice genotypes displaying a quiescence or escape strategy for flooding tolerance.

Parlanti S, Kudahettige NP, Lombardi L, Mensuali-Sodi A, Alpi A, Perata P, Pucciariello C.

Ann Bot. 2011 Jun;107(8):1335-43. doi: 10.1093/aob/mcr086. Epub 2011 Apr 12.


Plants and flooding stress.

Perata P, Armstrong W, Voesenek LA.

New Phytol. 2011 Apr;190(2):269-73. doi: 10.1111/j.1469-8137.2011.03702.x. No abstract available.


Transcript profiling of chitosan-treated Arabidopsis seedlings.

Povero G, Loreti E, Pucciariello C, Santaniello A, Di Tommaso D, Di Tommaso G, Kapetis D, Zolezzi F, Piaggesi A, Perata P.

J Plant Res. 2011 Sep;124(5):619-29. doi: 10.1007/s10265-010-0399-1. Epub 2011 Jan 15.


Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera.

Licausi F, Giorgi FM, Zenoni S, Osti F, Pezzotti M, Perata P.

BMC Genomics. 2010 Dec 20;11:719. doi: 10.1186/1471-2164-11-719.


Alcohol dehydrogenase and hydrogenase transcript fluctuations during a day-night cycle in Chlamydomonas reinhardtii: the role of anoxia.

Whitney LA, Loreti E, Alpi A, Perata P.

New Phytol. 2011 Apr;190(2):488-98. doi: 10.1111/j.1469-8137.2010.03503.x. Epub 2010 Oct 22.


Transcriptional analysis in high-anthocyanin tomatoes reveals synergistic effect of Aft and atv genes.

Povero G, Gonzali S, Bassolino L, Mazzucato A, Perata P.

J Plant Physiol. 2011 Feb 15;168(3):270-9. doi: 10.1016/j.jplph.2010.07.022.


Hormonal interplay during adventitious root formation in flooded tomato plants.

Vidoz ML, Loreti E, Mensuali A, Alpi A, Perata P.

Plant J. 2010 Aug;63(4):551-62. doi: 10.1111/j.1365-313X.2010.04262.x.


HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana.

Licausi F, van Dongen JT, Giuntoli B, Novi G, Santaniello A, Geigenberger P, Perata P.

Plant J. 2010 Apr;62(2):302-15. doi: 10.1111/j.1365-313X.2010.04149.x. Epub 2010 Jan 22.

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