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Items: 1 to 50 of 99

1.

ARGONAUTE1 and ARGONAUTE4 regulate gene expression and hypoxia tolerance.

Loreti E, Betti F, Ladera-Carmona MJ, Fontana F, Novi G, Valeri MC, Perata P.

Plant Physiol. 2019 Jul 29. pii: pp.00741.2019. doi: 10.1104/pp.19.00741. [Epub ahead of print]

2.

Conserved N-terminal cysteine dioxygenases transduce responses to hypoxia in animals and plants.

Masson N, Keeley TP, Giuntoli B, White MD, Puerta ML, Perata P, Hopkinson RJ, Flashman E, Licausi F, Ratcliffe PJ.

Science. 2019 Jul 5;365(6448):65-69. doi: 10.1126/science.aaw0112.

PMID:
31273118
3.

Exploring Legume-Rhizobia Symbiotic Models for Waterlogging Tolerance.

Pucciariello C, Boscari A, Tagliani A, Brouquisse R, Perata P.

Front Plant Sci. 2019 May 8;10:578. doi: 10.3389/fpls.2019.00578. eCollection 2019. Review.

4.

A Ratiometric Sensor Based on Plant N-Terminal Degrons Able to Report Oxygen Dynamics in Saccharomyces cerevisiae.

Puerta ML, Shukla V, Dalle Carbonare L, Weits DA, Perata P, Licausi F, Giuntoli B.

J Mol Biol. 2019 Jul 12;431(15):2810-2820. doi: 10.1016/j.jmb.2019.05.023. Epub 2019 May 22.

PMID:
31125566
5.

Zinc Excess Induces a Hypoxia-Like Response by Inhibiting Cysteine Oxidases in Poplar Roots.

Carbonare LD, White MD, Shukla V, Francini A, Perata P, Flashman E, Sebastiani L, Licausi F.

Plant Physiol. 2019 Jul;180(3):1614-1628. doi: 10.1104/pp.18.01458. Epub 2019 Apr 24.

6.

Conservation of ethanol fermentation and its regulation in land plants.

Bui LT, Novi G, Lombardi L, Iannuzzi C, Rossi J, Santaniello A, Mensuali A, Corbineau F, Giuntoli B, Perata P, Zaffagnini M, Licausi F.

J Exp Bot. 2019 Mar 27;70(6):1815-1827. doi: 10.1093/jxb/erz052.

7.

Dissection of coleoptile elongation in japonica rice under submergence through integrated genome-wide association mapping and transcriptional analyses.

Nghi KN, Tondelli A, Valè G, Tagliani A, Marè C, Perata P, Pucciariello C.

Plant Cell Environ. 2019 Jun;42(6):1832-1846. doi: 10.1111/pce.13540. Epub 2019 Mar 22.

PMID:
30802973
8.

Endogenous Hypoxia in Lateral Root Primordia Controls Root Architecture by Antagonizing Auxin Signaling in Arabidopsis.

Shukla V, Lombardi L, Iacopino S, Pencik A, Novak O, Perata P, Giuntoli B, Licausi F.

Mol Plant. 2019 Apr 1;12(4):538-551. doi: 10.1016/j.molp.2019.01.007. Epub 2019 Jan 11.

PMID:
30641154
9.

A Synthetic Oxygen Sensor for Plants Based on Animal Hypoxia Signaling.

Iacopino S, Jurinovich S, Cupellini L, Piccinini L, Cardarelli F, Perata P, Mennucci B, Giuntoli B, Licausi F.

Plant Physiol. 2019 Mar;179(3):986-1000. doi: 10.1104/pp.18.01003. Epub 2018 Nov 20.

PMID:
30459266
10.

Optimizing shelf life conditions for anthocyanin-rich tomatoes.

Petric T, Kiferle C, Perata P, Gonzali S.

PLoS One. 2018 Oct 11;13(10):e0205650. doi: 10.1371/journal.pone.0205650. eCollection 2018.

11.

The atroviolacea Gene Encodes an R3-MYB Protein Repressing Anthocyanin Synthesis in Tomato Plants.

Colanero S, Perata P, Gonzali S.

Front Plant Sci. 2018 Jun 19;9:830. doi: 10.3389/fpls.2018.00830. eCollection 2018.

12.

Transcriptome profiling of short-term response to chilling stress in tolerant and sensitive Oryza sativa ssp. Japonica seedlings.

Buti M, Pasquariello M, Ronga D, Milc JA, Pecchioni N, Ho VT, Pucciariello C, Perata P, Francia E.

Funct Integr Genomics. 2018 Nov;18(6):627-644. doi: 10.1007/s10142-018-0615-y. Epub 2018 Jun 6.

PMID:
29876699
13.

The rice SUB1A gene: Making adaptation to submergence and post-submergence possible.

Perata P.

Plant Cell Environ. 2018 Apr;41(4):717-720. doi: 10.1111/pce.13122. Epub 2018 Jan 31. No abstract available.

PMID:
29314086
14.

Group VII Ethylene Response Factors in Arabidopsis: Regulation and Physiological Roles.

Giuntoli B, Perata P.

Plant Physiol. 2018 Feb;176(2):1143-1155. doi: 10.1104/pp.17.01225. Epub 2017 Dec 21. Review. No abstract available.

15.

Gene Regulation and Survival under Hypoxia Requires Starch Availability and Metabolism.

Loreti E, Valeri MC, Novi G, Perata P.

Plant Physiol. 2018 Feb;176(2):1286-1298. doi: 10.1104/pp.17.01002. Epub 2017 Oct 30.

16.

Ascophyllum nodosum Seaweed Extract Alleviates Drought Stress in Arabidopsis by Affecting Photosynthetic Performance and Related Gene Expression.

Santaniello A, Scartazza A, Gresta F, Loreti E, Biasone A, Di Tommaso D, Piaggesi A, Perata P.

Front Plant Sci. 2017 Aug 3;8:1362. doi: 10.3389/fpls.2017.01362. eCollection 2017.

17.

Age-dependent regulation of ERF-VII transcription factor activity in Arabidopsis thaliana.

Giuntoli B, Shukla V, Maggiorelli F, Giorgi FM, Lombardi L, Perata P, Licausi F.

Plant Cell Environ. 2017 Oct;40(10):2333-2346. doi: 10.1111/pce.13037. Epub 2017 Aug 30.

PMID:
28741696
18.

Functional Balancing of the Hypoxia Regulators RAP2.12 and HRA1 Takes Place in vivo in Arabidopsis thaliana Plants.

Giuntoli B, Licausi F, van Veen H, Perata P.

Front Plant Sci. 2017 Apr 25;8:591. doi: 10.3389/fpls.2017.00591. eCollection 2017.

19.

Community recommendations on terminology and procedures used in flooding and low oxygen stress research.

Sasidharan R, Bailey-Serres J, Ashikari M, Atwell BJ, Colmer TD, Fagerstedt K, Fukao T, Geigenberger P, Hebelstrup KH, Hill RD, Holdsworth MJ, Ismail AM, Licausi F, Mustroph A, Nakazono M, Pedersen O, Perata P, Sauter M, Shih MC, Sorrell BK, Striker GG, van Dongen JT, Whelan J, Xiao S, Visser EJW, Voesenek LACJ.

New Phytol. 2017 Jun;214(4):1403-1407. doi: 10.1111/nph.14519. Epub 2017 Mar 9. No abstract available.

20.

Phenotiki: an open software and hardware platform for affordable and easy image-based phenotyping of rosette-shaped plants.

Minervini M, Giuffrida MV, Perata P, Tsaftaris SA.

Plant J. 2017 Apr;90(1):204-216. doi: 10.1111/tpj.13472. Epub 2017 Mar 2.

21.

Iodine biofortification of crops: agronomic biofortification, metabolic engineering and iodine bioavailability.

Gonzali S, Kiferle C, Perata P.

Curr Opin Biotechnol. 2017 Apr;44:16-26. doi: 10.1016/j.copbio.2016.10.004. Epub 2016 Oct 28. Review.

PMID:
27835794
22.

Plant responses to flooding stress.

Loreti E, van Veen H, Perata P.

Curr Opin Plant Biol. 2016 Oct;33:64-71. doi: 10.1016/j.pbi.2016.06.005. Epub 2016 Jun 18. Review.

PMID:
27322538
23.

New insights into reactive oxygen species and nitric oxide signalling under low oxygen in plants.

Pucciariello C, Perata P.

Plant Cell Environ. 2017 Apr;40(4):473-482. doi: 10.1111/pce.12715. Epub 2016 Apr 13. Review.

PMID:
26799776
24.

Tomato R2R3-MYB Proteins SlANT1 and SlAN2: Same Protein Activity, Different Roles.

Kiferle C, Fantini E, Bassolino L, Povero G, Spelt C, Buti S, Giuliano G, Quattrocchio F, Koes R, Perata P, Gonzali S.

PLoS One. 2015 Aug 26;10(8):e0136365. doi: 10.1371/journal.pone.0136365. eCollection 2015.

25.

New mechanistic links between sugar and hormone signalling networks.

Ljung K, Nemhauser JL, Perata P.

Curr Opin Plant Biol. 2015 Jun;25:130-7. doi: 10.1016/j.pbi.2015.05.022. Epub 2015 Jun 2. Review.

PMID:
26037392
26.

Universal stress protein HRU1 mediates ROS homeostasis under anoxia.

Gonzali S, Loreti E, Cardarelli F, Novi G, Parlanti S, Pucciariello C, Bassolino L, Banti V, Licausi F, Perata P.

Nat Plants. 2015 Oct 12;1:15151. doi: 10.1038/nplants.2015.151.

PMID:
27251529
27.

A trihelix DNA binding protein counterbalances hypoxia-responsive transcriptional activation in Arabidopsis.

Giuntoli B, Lee SC, Licausi F, Kosmacz M, Oosumi T, van Dongen JT, Bailey-Serres J, Perata P.

PLoS Biol. 2014 Sep 16;12(9):e1001950. doi: 10.1371/journal.pbio.1001950. eCollection 2014 Sep.

28.

Plant responses to flooding.

Pucciariello C, Voesenek LA, Perata P, Sasidharan R.

Front Plant Sci. 2014 May 23;5:226. doi: 10.3389/fpls.2014.00226. eCollection 2014. No abstract available.

29.

A reassessment of the role of sucrose synthase in the hypoxic sucrose-ethanol transition in Arabidopsis.

Santaniello A, Loreti E, Gonzali S, Novi G, Perata P.

Plant Cell Environ. 2014 Oct;37(10):2294-302. doi: 10.1111/pce.12363. Epub 2014 Jun 2.

30.

Plant cysteine oxidases control the oxygen-dependent branch of the N-end-rule pathway.

Weits DA, Giuntoli B, Kosmacz M, Parlanti S, Hubberten HM, Riegler H, Hoefgen R, Perata P, van Dongen JT, Licausi F.

Nat Commun. 2014 Mar 6;5:3425. doi: 10.1038/ncomms4425.

31.

Accumulation of anthocyanins in tomato skin extends shelf life.

Bassolino L, Zhang Y, Schoonbeek HJ, Kiferle C, Perata P, Martin C.

New Phytol. 2013 Nov;200(3):650-5. doi: 10.1111/nph.12524. Epub 2013 Sep 18.

32.

Nighttime sugar starvation orchestrates gibberellin biosynthesis and plant growth in Arabidopsis.

Paparelli E, Parlanti S, Gonzali S, Novi G, Mariotti L, Ceccarelli N, van Dongen JT, Kölling K, Zeeman SC, Perata P.

Plant Cell. 2013 Oct;25(10):3760-9. doi: 10.1105/tpc.113.115519. Epub 2013 Oct 4.

33.
34.

Tomato fruits: a good target for iodine biofortification.

Kiferle C, Gonzali S, Holwerda HT, Ibaceta RR, Perata P.

Front Plant Sci. 2013 Jun 27;4:205. doi: 10.3389/fpls.2013.00205. Print 2013.

35.

Quiescence in rice submergence tolerance: an evolutionary hypothesis.

Pucciariello C, Perata P.

Trends Plant Sci. 2013 Jul;18(7):377-81. doi: 10.1016/j.tplants.2013.04.007. Epub 2013 May 21. Review.

PMID:
23706591
36.

Analysis of the role of the pyruvate decarboxylase gene family in Arabidopsis thaliana under low-oxygen conditions.

Mithran M, Paparelli E, Novi G, Perata P, Loreti E.

Plant Biol (Stuttg). 2014 Jan;16(1):28-34. doi: 10.1111/plb.12005. Epub 2013 Apr 10.

PMID:
23574450
37.

Iodine fortification of vegetables improves human iodine nutrition: in vivo evidence for a new model of iodine prophylaxis.

Tonacchera M, Dimida A, De Servi M, Frigeri M, Ferrarini E, De Marco G, Grasso L, Agretti P, Piaggi P, Aghini-Lombardi F, Perata P, Pinchera A, Vitti P.

J Clin Endocrinol Metab. 2013 Apr;98(4):E694-7. doi: 10.1210/jc.2012-3509. Epub 2013 Mar 12.

PMID:
23482609
38.

Low oxygen response mechanisms in green organisms.

Banti V, Giuntoli B, Gonzali S, Loreti E, Magneschi L, Novi G, Paparelli E, Parlanti S, Pucciariello C, Santaniello A, Perata P.

Int J Mol Sci. 2013 Feb 27;14(3):4734-61. doi: 10.3390/ijms14034734.

39.

New role for an old rule: N-end rule-mediated degradation of ethylene responsive factor proteins governs low oxygen response in plants(F).

Licausi F, Pucciariello C, Perata P.

J Integr Plant Biol. 2013 Jan;55(1):31-9. doi: 10.1111/jipb.12011.

PMID:
23164408
40.

Misexpression of a chloroplast aspartyl protease leads to severe growth defects and alters carbohydrate metabolism in Arabidopsis.

Paparelli E, Gonzali S, Parlanti S, Novi G, Giorgi FM, Licausi F, Kosmacz M, Feil R, Lunn JE, Brust H, van Dongen JT, Steup M, Perata P.

Plant Physiol. 2012 Nov;160(3):1237-50. doi: 10.1104/pp.112.204016. Epub 2012 Sep 17.

41.

Distinct mechanisms regulating gene expression coexist within the fermentative pathways in Chlamydomonas reinhardtii.

Swirsky Whitney LA, Novi G, Perata P, Loreti E.

ScientificWorldJournal. 2012;2012:565047. doi: 10.1100/2012/565047. Epub 2012 Jun 18.

42.

How plants sense low oxygen.

Pucciariello C, Perata P.

Plant Signal Behav. 2012 Jul;7(7):813-6. doi: 10.4161/psb.20322. Epub 2012 Jul 1. Review.

43.

SUB1A-dependent and -independent mechanisms are involved in the flooding tolerance of wild rice species.

Niroula RK, Pucciariello C, Ho VT, Novi G, Fukao T, Perata P.

Plant J. 2012 Oct;72(2):282-93. doi: 10.1111/j.1365-313X.2012.05078.x. Epub 2012 Jul 24.

44.

Metabolic engineering of the iodine content in Arabidopsis.

Landini M, Gonzali S, Kiferle C, Tonacchera M, Agretti P, Dimida A, Vitti P, Alpi A, Pinchera A, Perata P.

Sci Rep. 2012;2:338. doi: 10.1038/srep00338. Epub 2012 Mar 27.

45.

ROS signaling as common element in low oxygen and heat stresses.

Pucciariello C, Banti V, Perata P.

Plant Physiol Biochem. 2012 Oct;59:3-10. doi: 10.1016/j.plaphy.2012.02.016. Epub 2012 Mar 3. Review.

PMID:
22417734
46.

Reactive oxygen species-driven transcription in Arabidopsis under oxygen deprivation.

Pucciariello C, Parlanti S, Banti V, Novi G, Perata P.

Plant Physiol. 2012 May;159(1):184-96. doi: 10.1104/pp.111.191122. Epub 2012 Mar 13.

47.

Making sense of low oxygen sensing.

Bailey-Serres J, Fukao T, Gibbs DJ, Holdsworth MJ, Lee SC, Licausi F, Perata P, Voesenek LA, van Dongen JT.

Trends Plant Sci. 2012 Mar;17(3):129-38. doi: 10.1016/j.tplants.2011.12.004. Epub 2012 Jan 24. Review.

PMID:
22280796
48.

A mutant in the ADH1 gene of Chlamydomonas reinhardtii elicits metabolic restructuring during anaerobiosis.

Magneschi L, Catalanotti C, Subramanian V, Dubini A, Yang W, Mus F, Posewitz MC, Seibert M, Perata P, Grossman AR.

Plant Physiol. 2012 Mar;158(3):1293-305. doi: 10.1104/pp.111.191569. Epub 2012 Jan 23.

49.

Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization.

Licausi F, Kosmacz M, Weits DA, Giuntoli B, Giorgi FM, Voesenek LA, Perata P, van Dongen JT.

Nature. 2011 Oct 23;479(7373):419-22. doi: 10.1038/nature10536.

PMID:
22020282
50.

HRE-type genes are regulated by growth-related changes in internal oxygen concentrations during the normal development of potato (Solanum tuberosum) tubers.

Licausi F, Giorgi FM, Schmälzlin E, Usadel B, Perata P, van Dongen JT, Geigenberger P.

Plant Cell Physiol. 2011 Nov;52(11):1957-72. doi: 10.1093/pcp/pcr128. Epub 2011 Sep 27.

PMID:
21954444

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