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Items: 17

1.

Why phylogenomic uncertainty enhances introgression analyses.

Pease JB.

Mol Ecol. 2018 Nov;27(22):4347-4349. doi: 10.1111/mec.14851. No abstract available.

PMID:
30474302
2.

Group A Rotavirus VP1 Polymerase and VP2 Core Shell Proteins: Intergenotypic Sequence Variation and In Vitro Functional Compatibility.

Steger CL, Boudreaux CE, LaConte LE, Pease JB, McDonald SM.

J Virol. 2019 Jan 4;93(2). pii: e01642-18. doi: 10.1128/JVI.01642-18. Print 2019 Jan 15.

PMID:
30355692
3.

Loss of Elongation-Like Factor 1 Spontaneously Induces Diverse, RNase H-Related Suppressor Mutations in Schizosaccharomyces pombe.

Marayati BF, Drayton AL, Tucker JF, Huckabee RH, Anderson AM, Pease JB, Zeyl CW, Zhang K.

Genetics. 2018 Aug;209(4):967-981. doi: 10.1534/genetics.118.301055. Epub 2018 May 29.

4.

Quartet Sampling distinguishes lack of support from conflicting support in the green plant tree of life.

Pease JB, Brown JW, Walker JF, Hinchliff CE, Smith SA.

Am J Bot. 2018 Mar;105(3):385-403. doi: 10.1002/ajb2.1016. Epub 2018 Feb 14.

PMID:
29746719
5.

Molecular mechanisms of postmating prezygotic reproductive isolation uncovered by transcriptome analysis.

Pease JB, Guerrero RF, Sherman NA, Hahn MW, Moyle LC.

Mol Ecol. 2016 Jun;25(11):2592-608. doi: 10.1111/mec.13679. Epub 2016 May 30.

PMID:
27136303
6.

Heterogeneous molecular processes among the causes of how sequence similarity scores can fail to recapitulate phylogeny.

Smith SA, Pease JB.

Brief Bioinform. 2017 May 1;18(3):451-457. doi: 10.1093/bib/bbw034.

7.

Powerful methods for detecting introgressed regions from population genomic data.

Rosenzweig BK, Pease JB, Besansky NJ, Hahn MW.

Mol Ecol. 2016 Jun;25(11):2387-97. doi: 10.1111/mec.13610. Epub 2016 Mar 31.

8.

Phylogenomics Reveals Three Sources of Adaptive Variation during a Rapid Radiation.

Pease JB, Haak DC, Hahn MW, Moyle LC.

PLoS Biol. 2016 Feb 12;14(2):e1002379. doi: 10.1371/journal.pbio.1002379. eCollection 2016 Feb.

9.

Encoding Data Using Biological Principles: The Multisample Variant Format for Phylogenomics and Population Genomics.

Pease JB, Rosenzweig BK.

IEEE/ACM Trans Comput Biol Bioinform. 2018 Jul-Aug;15(4):1231-1238. doi: 10.1109/TCBB.2015.2509997. Epub 2015 Dec 17.

PMID:
26701894
10.

Detection and Polarization of Introgression in a Five-Taxon Phylogeny.

Pease JB, Hahn MW.

Syst Biol. 2015 Jul;64(4):651-62. doi: 10.1093/sysbio/syv023. Epub 2015 Apr 17.

PMID:
25888025
11.

Mosquito genomics. Extensive introgression in a malaria vector species complex revealed by phylogenomics.

Fontaine MC, Pease JB, Steele A, Waterhouse RM, Neafsey DE, Sharakhov IV, Jiang X, Hall AB, Catteruccia F, Kakani E, Mitchell SN, Wu YC, Smith HA, Love RR, Lawniczak MK, Slotman MA, Emrich SJ, Hahn MW, Besansky NJ.

Science. 2015 Jan 2;347(6217):1258524. doi: 10.1126/science.1258524. Epub 2014 Nov 27.

12.

Quantitative genetic analysis indicates natural selection on leaf phenotypes across wild tomato species (Solanum sect. Lycopersicon; Solanaceae).

Muir CD, Pease JB, Moyle LC.

Genetics. 2014 Dec;198(4):1629-43. doi: 10.1534/genetics.114.169276. Epub 2014 Oct 8.

13.

More accurate phylogenies inferred from low-recombination regions in the presence of incomplete lineage sorting.

Pease JB, Hahn MW.

Evolution. 2013 Aug;67(8):2376-84. doi: 10.1111/evo.12118. Epub 2013 Apr 19.

14.

Sex chromosomes evolved from independent ancestral linkage groups in winged insects.

Pease JB, Hahn MW.

Mol Biol Evol. 2012 Jun;29(6):1645-53. doi: 10.1093/molbev/mss010. Epub 2012 Jan 16.

PMID:
22319158
15.

No excess gene movement is detected off the avian or lepidopteran Z chromosome.

Toups MA, Pease JB, Hahn MW.

Genome Biol Evol. 2011;3:1381-90. doi: 10.1093/gbe/evr109. Epub 2011 Oct 24.

16.

On the possible role of robustness in the evolution of infectious diseases.

Ogbunugafor CB, Pease JB, Turner PE.

Chaos. 2010 Jun;20(2):026108. doi: 10.1063/1.3455189.

17.

Histone hydrolase activity in regenerating limbs of the adult newt, Diemictylus viridescens.

Procaccini DJ, Procaccini RL, Pease JB.

Oncology. 1974;29(3):265-71. No abstract available.

PMID:
4413690

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