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Items: 1 to 50 of 235

1.

Molecular Determinants of Substrate Affinity and Enzyme Activity of a Cytochrome P450BM3 Variant.

Geronimo I, Denning CA, Heidary DK, Glazer EC, Payne CM.

Biophys J. 2018 Aug 27. pii: S0006-3495(18)30980-9. doi: 10.1016/j.bpj.2018.08.026. [Epub ahead of print]

PMID:
30224054
2.

Desulfination by 2'-hydroxybiphenyl-2-sulfinate desulfinase proceeds via electrophilic aromatic substitution by the cysteine-27 proton.

Geronimo I, Nigam SR, Payne CM.

Chem Sci. 2017 Jul 1;8(7):5078-5086. doi: 10.1039/c7sc00496f. Epub 2017 May 17.

3.

Structural and molecular dynamics studies of a C1-oxidizing lytic polysaccharide monooxygenase from Heterobasidion irregulare reveal amino acids important for substrate recognition.

Liu B, Kognole AA, Wu M, Westereng B, Crowley MF, Kim S, Dimarogona M, Payne CM, Sandgren M.

FEBS J. 2018 Jun;285(12):2225-2242. doi: 10.1111/febs.14472. Epub 2018 Apr 24.

PMID:
29660793
4.

Correlation of structure, function and protein dynamics in GH7 cellobiohydrolases from Trichoderma atroviride, T. reesei and T. harzianum.

Borisova AS, Eneyskaya EV, Jana S, Badino SF, Kari J, Amore A, Karlsson M, Hansson H, Sandgren M, Himmel ME, Westh P, Payne CM, Kulminskaya AA, Ståhlberg J.

Biotechnol Biofuels. 2018 Jan 13;11:5. doi: 10.1186/s13068-017-1006-7. eCollection 2018.

5.

The role of catalytic residue pKa on the hydrolysis/transglycosylation partition in family 3 β-glucosidases.

Geronimo I, Payne CM, Sandgren M.

Org Biomol Chem. 2018 Jan 3;16(2):316-324. doi: 10.1039/c7ob02558k.

PMID:
29251740
6.

Improving the thermal stability of cellobiohydrolase Cel7A from Hypocrea jecorina by directed evolution.

Goedegebuur F, Dankmeyer L, Gualfetti P, Karkehabadi S, Hansson H, Jana S, Huynh V, Kelemen BR, Kruithof P, Larenas EA, Teunissen PJM, Ståhlberg J, Payne CM, Mitchinson C, Sandgren M.

J Biol Chem. 2017 Oct 20;292(42):17418-17430. doi: 10.1074/jbc.M117.803270. Epub 2017 Aug 31.

PMID:
28860192
7.

Inhibition of Mammalian Glycoprotein YKL-40: IDENTIFICATION OF THE PHYSIOLOGICAL LIGAND.

Kognole AA, Payne CM.

J Biol Chem. 2017 Feb 17;292(7):2624-2636. doi: 10.1074/jbc.M116.764985. Epub 2017 Jan 4.

8.

CHARMM force field parameters for 2'-hydroxybiphenyl-2-sulfinate, 2-hydroxybiphenyl, and related analogs.

Yu Y, Fursule IA, Mills LC, Englert DL, Berron BJ, Payne CM.

J Mol Graph Model. 2017 Mar;72:32-42. doi: 10.1016/j.jmgm.2016.12.005. Epub 2016 Dec 15.

PMID:
28027509
9.

Effect of Mutation and Substrate Binding on the Stability of Cytochrome P450BM3 Variants.

Geronimo I, Denning CA, Rogers WE, Othman T, Huxford T, Heidary DK, Glazer EC, Payne CM.

Biochemistry. 2016 Jun 28;55(25):3594-606. doi: 10.1021/acs.biochem.6b00183. Epub 2016 Jun 16.

PMID:
27267136
10.

Aromatic-Mediated Carbohydrate Recognition in Processive Serratia marcescens Chitinases.

Jana S, Hamre AG, Wildberger P, Holen MM, Eijsink VG, Beckham GT, Sørlie M, Payne CM.

J Phys Chem B. 2016 Feb 25;120(7):1236-49. doi: 10.1021/acs.jpcb.5b12610. Epub 2016 Feb 15.

PMID:
26824449
11.

Plant α-glucan phosphatases SEX4 and LSF2 display different affinity for amylopectin and amylose.

Wilkens C, Auger KD, Anderson NT, Meekins DA, Raththagala M, Abou Hachem M, Payne CM, Gentry MS, Svensson B.

FEBS Lett. 2016 Jan;590(1):118-28. doi: 10.1002/1873-3468.12027. Epub 2016 Jan 4.

12.

Processivity, Substrate Positioning, and Binding: The Role of Polar Residues in a Family 18 Glycoside Hydrolase.

Hamre AG, Jana S, Reppert NK, Payne CM, Sørlie M.

Biochemistry. 2015 Dec 15;54(49):7292-306. doi: 10.1021/acs.biochem.5b00830. Epub 2015 Dec 2.

PMID:
26503416
13.

Sequencing, biochemical characterization, crystal structure and molecular dynamics of cellobiohydrolase Cel7A from Geotrichum candidum 3C.

Borisova AS, Eneyskaya EV, Bobrov KS, Jana S, Logachev A, Polev DE, Lapidus AL, Ibatullin FM, Saleem U, Sandgren M, Payne CM, Kulminskaya AA, Ståhlberg J.

FEBS J. 2015 Dec;282(23):4515-37. doi: 10.1111/febs.13509. Epub 2015 Oct 8.

14.

Analysis of Phospholipid Bilayers on Gold Nanorods by Plasmon Resonance Sensing and Surface-Enhanced Raman Scattering.

Matthews JR, Payne CM, Hafner JH.

Langmuir. 2015 Sep 15;31(36):9893-900. doi: 10.1021/acs.langmuir.5b01203. Epub 2015 Sep 2.

PMID:
26302310
15.

Structural and Functional Characterization of a Lytic Polysaccharide Monooxygenase with Broad Substrate Specificity.

Borisova AS, Isaksen T, Dimarogona M, Kognole AA, Mathiesen G, Várnai A, Røhr ÅK, Payne CM, Sørlie M, Sandgren M, Eijsink VG.

J Biol Chem. 2015 Sep 18;290(38):22955-69. doi: 10.1074/jbc.M115.660183. Epub 2015 Jul 15.

16.

Thermodynamic Relationships with Processivity in Serratia marcescens Family 18 Chitinases.

Hamre AG, Jana S, Holen MM, Mathiesen G, Väljamäe P, Payne CM, Sørlie M.

J Phys Chem B. 2015 Jul 30;119(30):9601-13. doi: 10.1021/acs.jpcb.5b03817. Epub 2015 Jul 22.

PMID:
26154587
17.

Cello-oligomer-binding dynamics and directionality in family 4 carbohydrate-binding modules.

Kognole AA, Payne CM.

Glycobiology. 2015 Oct;25(10):1100-11. doi: 10.1093/glycob/cwv048. Epub 2015 Jul 7.

PMID:
26153106
18.

Effects of lytic polysaccharide monooxygenase oxidation on cellulose structure and binding of oxidized cellulose oligomers to cellulases.

Vermaas JV, Crowley MF, Beckham GT, Payne CM.

J Phys Chem B. 2015 May 21;119(20):6129-43. doi: 10.1021/acs.jpcb.5b00778. Epub 2015 Apr 2.

PMID:
25785779
19.

Fungal cellulases.

Payne CM, Knott BC, Mayes HB, Hansson H, Himmel ME, Sandgren M, Ståhlberg J, Beckham GT.

Chem Rev. 2015 Feb 11;115(3):1308-448. doi: 10.1021/cr500351c. Epub 2015 Jan 28. Review. No abstract available.

PMID:
25629559
20.

Towards a molecular-level theory of carbohydrate processivity in glycoside hydrolases.

Beckham GT, Ståhlberg J, Knott BC, Himmel ME, Crowley MF, Sandgren M, Sørlie M, Payne CM.

Curr Opin Biotechnol. 2014 Jun;27:96-106. doi: 10.1016/j.copbio.2013.12.002. Epub 2014 Jan 4. Review.

PMID:
24863902
21.

Synthesis and Crystal Structure of Gold Nanobelts.

Payne CM, Tsentalovich DE, Benoit DN, Anderson LJ, Guo W, Colvin VL, Pasquali M, Hafner JH.

Chem Mater. 2014 Mar 25;26(6):1999-2004. Epub 2014 Feb 11.

22.

Glycoside hydrolase processivity is directly related to oligosaccharide binding free energy.

Payne CM, Jiang W, Shirts MR, Himmel ME, Crowley MF, Beckham GT.

J Am Chem Soc. 2013 Dec 18;135(50):18831-9. doi: 10.1021/ja407287f. Epub 2013 Dec 5.

PMID:
24279927
23.

Gold nanobelts as high confinement plasmonic waveguides.

Anderson LJ, Zhen YR, Payne CM, Nordlander P, Hafner JH.

Nano Lett. 2013;13(12):6256-61. doi: 10.1021/nl4037356. Epub 2013 Nov 26.

PMID:
24205882
24.

Why women are dying from unsafe abortion: narratives of Ghanaian abortion providers.

Payne CM, Debbink MP, Steele EA, Buck CT, Martin LA, Hassinger JA, Harris LH.

Afr J Reprod Health. 2013 Jun;17(2):118-28.

PMID:
24069757
25.

Glycosylated linkers in multimodular lignocellulose-degrading enzymes dynamically bind to cellulose.

Payne CM, Resch MG, Chen L, Crowley MF, Himmel ME, Taylor LE 2nd, Sandgren M, Ståhlberg J, Stals I, Tan Z, Beckham GT.

Proc Natl Acad Sci U S A. 2013 Sep 3;110(36):14646-51. doi: 10.1073/pnas.1309106110. Epub 2013 Aug 19.

26.
27.

Structural characterization of a unique marine animal family 7 cellobiohydrolase suggests a mechanism of cellulase salt tolerance.

Kern M, McGeehan JE, Streeter SD, Martin RN, Besser K, Elias L, Eborall W, Malyon GP, Payne CM, Himmel ME, Schnorr K, Beckham GT, Cragg SM, Bruce NC, McQueen-Mason SJ.

Proc Natl Acad Sci U S A. 2013 Jun 18;110(25):10189-94. doi: 10.1073/pnas.1301502110. Epub 2013 Jun 3.

28.

Uses of phage display in agriculture: a review of food-related protein-protein interactions discovered by biopanning over diverse baits.

Kushwaha R, Payne CM, Downie AB.

Comput Math Methods Med. 2013;2013:653759. doi: 10.1155/2013/653759. Epub 2013 Apr 28. Review.

29.

Binding site dynamics and aromatic-carbohydrate interactions in processive and non-processive family 7 glycoside hydrolases.

Taylor CB, Payne CM, Himmel ME, Crowley MF, McCabe C, Beckham GT.

J Phys Chem B. 2013 May 2;117(17):4924-33. doi: 10.1021/jp401410h. Epub 2013 Apr 10.

PMID:
23534900
30.

Crystal structure and computational characterization of the lytic polysaccharide monooxygenase GH61D from the Basidiomycota fungus Phanerochaete chrysosporium.

Wu M, Beckham GT, Larsson AM, Ishida T, Kim S, Payne CM, Himmel ME, Crowley MF, Horn SJ, Westereng B, Igarashi K, Samejima M, Ståhlberg J, Eijsink VG, Sandgren M.

J Biol Chem. 2013 May 3;288(18):12828-39. doi: 10.1074/jbc.M113.459396. Epub 2013 Mar 22.

31.

Structural, biochemical, and computational characterization of the glycoside hydrolase family 7 cellobiohydrolase of the tree-killing fungus Heterobasidion irregulare.

Momeni MH, Payne CM, Hansson H, Mikkelsen NE, Svedberg J, Engström Å, Sandgren M, Beckham GT, Ståhlberg J.

J Biol Chem. 2013 Feb 22;288(8):5861-72. doi: 10.1074/jbc.M112.440891. Epub 2013 Jan 9.

32.

Cellulase linkers are optimized based on domain type and function: insights from sequence analysis, biophysical measurements, and molecular simulation.

Sammond DW, Payne CM, Brunecky R, Himmel ME, Crowley MF, Beckham GT.

PLoS One. 2012;7(11):e48615. doi: 10.1371/journal.pone.0048615. Epub 2012 Nov 6.

33.

Urogenital symptoms and pain history as precursors of vulvodynia: a longitudinal study.

Reed BD, Payne CM, Harlow SD, Legocki LJ, Haefner HK, Sen A.

J Womens Health (Larchmt). 2012 Nov;21(11):1139-43. doi: 10.1089/jwh.2012.3566.

34.

Hallmarks of processivity in glycoside hydrolases from crystallographic and computational studies of the Serratia marcescens chitinases.

Payne CM, Baban J, Horn SJ, Backe PH, Arvai AS, Dalhus B, Bjørås M, Eijsink VG, Sørlie M, Beckham GT, Vaaje-Kolstad G.

J Biol Chem. 2012 Oct 19;287(43):36322-30. doi: 10.1074/jbc.M112.402149. Epub 2012 Sep 5.

35.

Deficient expression of DNA repair enzymes in early progression to sporadic colon cancer.

Facista A, Nguyen H, Lewis C, Prasad AR, Ramsey L, Zaitlin B, Nfonsam V, Krouse RS, Bernstein H, Payne CM, Stern S, Oatman N, Banerjee B, Bernstein C.

Genome Integr. 2012 Apr 11;3(1):3. doi: 10.1186/2041-9414-3-3.

36.

Harnessing glycosylation to improve cellulase activity.

Beckham GT, Dai Z, Matthews JF, Momany M, Payne CM, Adney WS, Baker SE, Himmel ME.

Curr Opin Biotechnol. 2012 Jun;23(3):338-45. doi: 10.1016/j.copbio.2011.11.030. Epub 2011 Dec 18. Review.

PMID:
22186222
37.

Maspin is a deoxycholate-inducible, anti-apoptotic stress-response protein differentially expressed during colon carcinogenesis.

Payne CM, Holubec H, Crowley-Skillicorn C, Nguyen H, Bernstein H, Wilcox G, Bernstein C.

Clin Exp Gastroenterol. 2011;4:239-53. doi: 10.2147/CEG.S24093. Epub 2011 Oct 3.

38.

A tunable plasmon resonance in gold nanobelts.

Anderson LJ, Payne CM, Zhen YR, Nordlander P, Hafner JH.

Nano Lett. 2011 Nov 9;11(11):5034-7. doi: 10.1021/nl203085t. Epub 2011 Oct 11.

PMID:
21973047
39.

Structural transition in the surfactant layer that surrounds gold nanorods as observed by analytical surface-enhanced Raman spectroscopy.

Lee S, Anderson LJ, Payne CM, Hafner JH.

Langmuir. 2011 Dec 20;27(24):14748-56. doi: 10.1021/la202918n. Epub 2011 Nov 17.

PMID:
21967525
40.

Multiple functions of aromatic-carbohydrate interactions in a processive cellulase examined with molecular simulation.

Payne CM, Bomble YJ, Taylor CB, McCabe C, Himmel ME, Crowley MF, Beckham GT.

J Biol Chem. 2011 Nov 25;286(47):41028-35. doi: 10.1074/jbc.M111.297713. Epub 2011 Sep 29.

41.

Molecular and cellular pathways associated with chromosome 1p deletions during colon carcinogenesis.

Payne CM, Crowley-Skillicorn C, Bernstein C, Holubec H, Bernstein H.

Clin Exp Gastroenterol. 2011;4:75-119. doi: 10.2147/CEG.S17114. Epub 2011 May 3.

42.

Carcinogenicity of deoxycholate, a secondary bile acid.

Bernstein C, Holubec H, Bhattacharyya AK, Nguyen H, Payne CM, Zaitlin B, Bernstein H.

Arch Toxicol. 2011 Aug;85(8):863-71. doi: 10.1007/s00204-011-0648-7. Epub 2011 Jan 26.

43.

Cancer and age related colonic crypt deficiencies in cytochrome c oxidase I.

Bernstein C, Facista A, Nguyen H, Zaitlin B, Hassounah N, Loustaunau C, Payne CM, Banerjee B, Goldschmid S, Tsikitis VL, Krouse R, Bernstein H.

World J Gastrointest Oncol. 2010 Dec 15;2(12):429-42. doi: 10.4251/wjgo.v2.i12.429.

44.

Persistence of functional hepatocyte-like cells in immune-compromised mice.

Payne CM, Samuel K, Pryde A, King J, Brownstein D, Schrader J, Medine CN, Forbes SJ, Iredale JP, Newsome PN, Hay DC.

Liver Int. 2011 Feb;31(2):254-62. doi: 10.1111/j.1478-3231.2010.02414.x. Epub 2010 Dec 10.

PMID:
21143581
45.

Deficient Pms2, ERCC1, Ku86, CcOI in field defects during progression to colon cancer.

Nguyen H, Loustaunau C, Facista A, Ramsey L, Hassounah N, Taylor H, Krouse R, Payne CM, Tsikitis VL, Goldschmid S, Banerjee B, Perini RF, Bernstein C.

J Vis Exp. 2010 Jul 28;(41). pii: 1931. doi: 10.3791/1931.

46.

Hydrophobic bile acid-induced micronuclei formation, mitotic perturbations, and decreases in spindle checkpoint proteins: relevance to genomic instability in colon carcinogenesis.

Payne CM, Crowley-Skillicorn C, Bernstein C, Holubec H, Moyer MP, Bernstein H.

Nutr Cancer. 2010;62(6):825-40. doi: 10.1080/01635581003695756.

PMID:
20661832
47.

Exposure of mouse colon to dietary bile acid supplement induces sessile adenomas.

Payne CM, Holubec H, Bhattacharyya AK, Bernstein C, Bernstein H.

Inflamm Bowel Dis. 2010 May;16(5):729-30. doi: 10.1002/ibd.21079. No abstract available.

PMID:
20135625
48.

Deoxycholate, an endogenous cytotoxin/genotoxin, induces the autophagic stress-survival pathway: implications for colon carcinogenesis.

Payne CM, Crowley-Skillicorn C, Holubec H, Dvorak K, Bernstein C, Moyer MP, Garewal H, Bernstein H.

J Toxicol. 2009;2009:785907. doi: 10.1155/2009/785907. Epub 2009 May 10.

49.

Generation of functional human hepatic endoderm from human induced pluripotent stem cells.

Sullivan GJ, Hay DC, Park IH, Fletcher J, Hannoun Z, Payne CM, Dalgetty D, Black JR, Ross JA, Samuel K, Wang G, Daley GQ, Lee JH, Church GM, Forbes SJ, Iredale JP, Wilmut I.

Hepatology. 2010 Jan;51(1):329-35. doi: 10.1002/hep.23335.

50.

The stabilization and targeting of surfactant-synthesized gold nanorods.

Rostro-Kohanloo BC, Bickford LR, Payne CM, Day ES, Anderson LJ, Zhong M, Lee S, Mayer KM, Zal T, Adam L, Dinney CP, Drezek RA, West JL, Hafner JH.

Nanotechnology. 2009 Oct 28;20(43):434005. doi: 10.1088/0957-4484/20/43/434005. Epub 2009 Oct 2.

PMID:
19801751

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