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Items: 21

1.

Genotyping by low-coverage whole-genome sequencing in intercross pedigrees from outbred founders: a cost-efficient approach.

Zan Y, Payen T, Lillie M, Honaker CF, Siegel PB, Carlborg Ö.

Genet Sel Evol. 2019 Aug 14;51(1):44. doi: 10.1186/s12711-019-0487-1.

2.

Population Genome Sequencing of the Scab Fungal Species Venturia inaequalis, Venturia pirina, Venturia aucupariae and Venturia asperata.

Le Cam B, Sargent D, Gouzy J, Amselem J, Bellanger MN, Bouchez O, Brown S, Caffier V, De Gracia M, Debuchy R, Duvaux L, Payen T, Sannier M, Shiller J, Collemare J, Lemaire C.

G3 (Bethesda). 2019 Aug 8;9(8):2405-2414. doi: 10.1534/g3.119.400047.

3.

3-D Longitudinal Imaging of Tumor Angiogenesis in Mice in Vivo Using Ultrafast Doppler Tomography.

Demené C, Payen T, Dizeux A, Barrois G, Gennisson JL, Bridal L, Tanter M.

Ultrasound Med Biol. 2019 May;45(5):1284-1296. doi: 10.1016/j.ultrasmedbio.2018.12.010. Epub 2019 Feb 22.

PMID:
30799125
4.

Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle.

Murat C, Payen T, Noel B, Kuo A, Morin E, Chen J, Kohler A, Krizsán K, Balestrini R, Da Silva C, Montanini B, Hainaut M, Levati E, Barry KW, Belfiori B, Cichocki N, Clum A, Dockter RB, Fauchery L, Guy J, Iotti M, Le Tacon F, Lindquist EA, Lipzen A, Malagnac F, Mello A, Molinier V, Miyauchi S, Poulain J, Riccioni C, Rubini A, Sitrit Y, Splivallo R, Traeger S, Wang M, Žifčáková L, Wipf D, Zambonelli A, Paolocci F, Nowrousian M, Ottonello S, Baldrian P, Spatafora JW, Henrissat B, Nagy LG, Aury JM, Wincker P, Grigoriev IV, Bonfante P, Martin FM.

Nat Ecol Evol. 2018 Dec;2(12):1956-1965. doi: 10.1038/s41559-018-0710-4. Epub 2018 Nov 12.

5.

Technical Note: In vivo Young's modulus mapping of pancreatic ductal adenocarcinoma during HIFU ablation using harmonic motion elastography (HME).

Nabavizadeh A, Payen T, Saharkhiz N, McGarry M, Olive KP, Konofagou EE.

Med Phys. 2018 Nov;45(11):5244-5250. doi: 10.1002/mp.13170. Epub 2018 Oct 1.

6.

Focused Ultrasound Steering for Harmonic Motion Imaging.

Han Y, Payen T, Wang S, Konofagou E.

IEEE Trans Ultrason Ferroelectr Freq Control. 2018 Feb;65(2):292-294. doi: 10.1109/TUFFC.2017.2781188.

7.

In Vivo Multiparametric Ultrasound Imaging of Structural and Functional Tumor Modifications during Therapy.

Dizeux A, Payen T, Le Guillou-Buffello D, Comperat E, Gennisson JL, Tanter M, Oelze M, Bridal SL.

Ultrasound Med Biol. 2017 Sep;43(9):2000-2012. doi: 10.1016/j.ultrasmedbio.2017.03.021. Epub 2017 May 27.

PMID:
28554540
8.

Fast lesion mapping during HIFU treatment using harmonic motion imaging guided focused ultrasound (HMIgFUS) in vitro and in vivo.

Han Y, Wang S, Payen T, Konofagou E.

Phys Med Biol. 2017 Apr 21;62(8):3111-3123. doi: 10.1088/1361-6560/aa6024. Epub 2017 Mar 21.

9.

Elasticity mapping of murine abdominal organs in vivo using harmonic motion imaging (HMI).

Payen T, Palermo CF, Sastra SA, Chen H, Han Y, Olive KP, Konofagou EE.

Phys Med Biol. 2016 Aug 7;61(15):5741-54. doi: 10.1088/0031-9155/61/15/5741. Epub 2016 Jul 12.

10.

Reproducibility of Contrast-Enhanced Ultrasound in Mice with Controlled Injection.

Dizeux A, Payen T, Barrois G, Le Guillou Buffello D, Bridal SL.

Mol Imaging Biol. 2016 Oct;18(5):651-8. doi: 10.1007/s11307-016-0952-y.

PMID:
27074840
11.

Reconstructing the evolutionary history of gypsy retrotransposons in the Périgord black truffle (Tuber melanosporum Vittad.).

Payen T, Murat C, Martin F.

Mycorrhiza. 2016 Aug;26(6):553-63. doi: 10.1007/s00572-016-0692-5. Epub 2016 Mar 30.

PMID:
27025914
12.
13.

Harmonic motion imaging for abdominal tumor detection and high-intensity focused ultrasound ablation monitoring: an in vivo feasibility study in a transgenic mouse model of pancreatic cancer.

Chen H, Hou GY, Han Y, Payen T, Palermo CF, Olive KP, Konofagou EE.

IEEE Trans Ultrason Ferroelectr Freq Control. 2015 Sep;62(9):1662-73. doi: 10.1109/TUFFC.2015.007113.

14.

VEGFR2-Targeted Contrast-Enhanced Ultrasound to Distinguish between Two Anti-Angiogenic Treatments.

Payen T, Dizeux A, Baldini C, Le Guillou-Buffello D, Lamuraglia M, Comperat E, Lucidarme O, Bridal SL.

Ultrasound Med Biol. 2015 Aug;41(8):2202-11. doi: 10.1016/j.ultrasmedbio.2015.04.010. Epub 2015 May 15.

PMID:
25980323
15.

A survey of genome-wide single nucleotide polymorphisms through genome resequencing in the Périgord black truffle (Tuber melanosporum Vittad.).

Payen T, Murat C, Gigant A, Morin E, De Mita S, Martin F.

Mol Ecol Resour. 2015 Sep;15(5):1243-55. doi: 10.1111/1755-0998.12391. Epub 2015 Mar 5.

PMID:
25703414
16.

Patterns of genomic variation in the poplar rust fungus Melampsora larici-populina identify pathogenesis-related factors.

Persoons A, Morin E, Delaruelle C, Payen T, Halkett F, Frey P, De Mita S, Duplessis S.

Front Plant Sci. 2014 Sep 15;5:450. doi: 10.3389/fpls.2014.00450. eCollection 2014.

17.

Fungal biology: compiling genomes and exploiting them.

Labbé J, Uehling J, Payen T, Plett J.

New Phytol. 2014 Jul;203(2):359-61. doi: 10.1111/nph.12891. No abstract available.

18.

A multiplicative model for improving microvascular flow estimation in dynamic contrast-enhanced ultrasound (DCE-US): theory and experimental validation.

Barrois G, Coron A, Payen T, Dizeux A, Bridal L.

IEEE Trans Ultrason Ferroelectr Freq Control. 2013 Nov;60(11):2284-94. doi: 10.1109/TUFFC.2013.6644733.

PMID:
24158285
19.

Improving prokaryotic transposable elements identification using a combination of de novo and profile HMM methods.

Kamoun C, Payen T, Hua-Van A, Filée J.

BMC Genomics. 2013 Oct 11;14:700. doi: 10.1186/1471-2164-14-700.

20.

Echo-power estimation from log-compressed video data in dynamic contrast-enhanced ultrasound imaging.

Payen T, Coron A, Lamuraglia M, Le Guillou-Buffello D, Gaud E, Arditi M, Lucidarme O, Bridal SL.

Ultrasound Med Biol. 2013 Oct;39(10):1826-37. doi: 10.1016/j.ultrasmedbio.2013.03.022. Epub 2013 Jul 21.

21.

Reconstructing the evolutionary history of transposable elements.

Le Rouzic A, Payen T, Hua-Van A.

Genome Biol Evol. 2013;5(1):77-86. doi: 10.1093/gbe/evs130.

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