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Items: 32

1.

Publisher Correction: Attachment of the blastoderm to the vitelline envelope affects gastrulation of insects.

Münster S, Jain A, Mietke A, Pavlopoulos A, Grill SW, Tomancak P.

Nature. 2019 Apr;568(7753):E14. doi: 10.1038/s41586-019-1143-1.

PMID:
30971828
2.

Attachment of the blastoderm to the vitelline envelope affects gastrulation of insects.

Münster S, Jain A, Mietke A, Pavlopoulos A, Grill SW, Tomancak P.

Nature. 2019 Apr;568(7752):395-399. doi: 10.1038/s41586-019-1044-3. Epub 2019 Mar 27. Erratum in: Nature. 2019 Apr 10;:.

PMID:
30918398
3.

Multi-view light-sheet imaging and tracking with the MaMuT software reveals the cell lineage of a direct developing arthropod limb.

Wolff C, Tinevez JY, Pietzsch T, Stamataki E, Harich B, Guignard L, Preibisch S, Shorte S, Keller PJ, Tomancak P, Pavlopoulos A.

Elife. 2018 Mar 29;7. pii: e34410. doi: 10.7554/eLife.34410.

4.

Altered Proteome of Extracellular Vesicles Derived from Bladder Cancer Patients Urine.

Lee J, McKinney KQ, Pavlopoulos AJ, Niu M, Kang JW, Oh JW, Kim KP, Hwang S.

Mol Cells. 2018 Mar 31;41(3):179-187. doi: 10.14348/molcells.2018.2110. Epub 2018 Mar 9.

5.

The genome of the crustacean Parhyale hawaiensis, a model for animal development, regeneration, immunity and lignocellulose digestion.

Kao D, Lai AG, Stamataki E, Rosic S, Konstantinides N, Jarvis E, Di Donfrancesco A, Pouchkina-Stancheva N, Sémon M, Grillo M, Bruce H, Kumar S, Siwanowicz I, Le A, Lemire A, Eisen MB, Extavour C, Browne WE, Wolff C, Averof M, Patel NH, Sarkies P, Pavlopoulos A, Aboobaker A.

Elife. 2016 Nov 16;5. pii: e20062. doi: 10.7554/eLife.20062.

6.

Exosomal proteome analysis of cerebrospinal fluid detects biosignatures of neuromyelitis optica and multiple sclerosis.

Lee J, McKinney KQ, Pavlopoulos AJ, Han MH, Kim SH, Kim HJ, Hwang S.

Clin Chim Acta. 2016 Nov 1;462:118-126. doi: 10.1016/j.cca.2016.09.001. Epub 2016 Sep 6.

PMID:
27609124
7.

Non-insect crustacean models in developmental genetics including an encomium to Parhyale hawaiensis.

Stamataki E, Pavlopoulos A.

Curr Opin Genet Dev. 2016 Aug;39:149-156. doi: 10.1016/j.gde.2016.07.004. Epub 2016 Jul 29. Review.

PMID:
27475080
8.

Toll Genes Have an Ancestral Role in Axis Elongation.

Benton MA, Pechmann M, Frey N, Stappert D, Conrads KH, Chen YT, Stamataki E, Pavlopoulos A, Roth S.

Curr Biol. 2016 Jun 20;26(12):1609-1615. doi: 10.1016/j.cub.2016.04.055. Epub 2016 May 19.

9.

Data supporting the identification of anti-metastatic drug and natural compound targets in isogenic colorectal cancer cells.

Lee JG, McKinney KQ, Pavlopoulos AJ, Park JH, Hwang S.

Data Brief. 2014 Nov 4;1:73-5. doi: 10.1016/j.dib.2014.10.005. eCollection 2014 Dec.

10.

A draft map of rhesus monkey tissue proteome for biomedical research.

Lee JG, McKinney KQ, Lee YY, Chung HN, Pavlopoulos AJ, Jung KY, Kim WK, Kuroda MJ, Han DK, Hwang S.

PLoS One. 2015 May 14;10(5):e0126243. doi: 10.1371/journal.pone.0126243. eCollection 2015.

11.

Identification of anti-metastatic drug and natural compound targets in isogenic colorectal cancer cells.

Lee JG, McKinney KQ, Pavlopoulos AJ, Park JH, Hwang S.

J Proteomics. 2015 Jan 15;113:326-36. doi: 10.1016/j.jprot.2014.10.009. Epub 2014 Oct 23.

PMID:
25451013
12.

Transgenesis in non-model organisms: the case of Parhyale.

Kontarakis Z, Pavlopoulos A.

Methods Mol Biol. 2014;1196:145-81. doi: 10.1007/978-1-4939-1242-1_10.

PMID:
25151163
13.

Tribolium embryo morphogenesis: may the force be with you.

Benton MA, Pavlopoulos A.

Bioarchitecture. 2014 Jan-Feb;4(1):16-21. doi: 10.4161/bioa.27815. Epub 2014 Jan 14.

14.

Cell and tissue dynamics during Tribolium embryogenesis revealed by versatile fluorescence labeling approaches.

Benton MA, Akam M, Pavlopoulos A.

Development. 2013 Aug;140(15):3210-20. doi: 10.1242/dev.096271.

15.

Identification of DNA sequences that flank a known region by inverse PCR.

Pavlopoulos A.

Methods Mol Biol. 2011;772:267-75. doi: 10.1007/978-1-61779-228-1_16.

PMID:
22065444
16.

Reconfiguring gene traps for new tasks using iTRAC.

Kontarakis Z, Konstantinides N, Pavlopoulos A, Averof M.

Fly (Austin). 2011 Oct-Dec;5(4):352-5. doi: 10.4161/fly.5.4.18108. Epub 2011 Oct 1.

17.

A versatile strategy for gene trapping and trap conversion in emerging model organisms.

Kontarakis Z, Pavlopoulos A, Kiupakis A, Konstantinides N, Douris V, Averof M.

Development. 2011 Jun;138(12):2625-30. doi: 10.1242/dev.066324.

18.

Hox gene Ultrabithorax regulates distinct sets of target genes at successive stages of Drosophila haltere morphogenesis.

Pavlopoulos A, Akam M.

Proc Natl Acad Sci U S A. 2011 Feb 15;108(7):2855-60. doi: 10.1073/pnas.1015077108. Epub 2011 Jan 31.

19.

Probing the evolution of appendage specialization by Hox gene misexpression in an emerging model crustacean.

Pavlopoulos A, Kontarakis Z, Liubicich DM, Serano JM, Akam M, Patel NH, Averof M.

Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13897-902. doi: 10.1073/pnas.0902804106. Epub 2009 Aug 4.

20.

Knockdown of Parhyale Ultrabithorax recapitulates evolutionary changes in crustacean appendage morphology.

Liubicich DM, Serano JM, Pavlopoulos A, Kontarakis Z, Protas ME, Kwan E, Chatterjee S, Tran KD, Averof M, Patel NH.

Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13892-6. doi: 10.1073/pnas.0903105106. Epub 2009 Aug 4.

21.

MALDI-TOF mass spectrometry as a tool for differentiation of invasive and noninvasive Streptococcus pyogenes isolates.

Moura H, Woolfitt AR, Carvalho MG, Pavlopoulos A, Teixeira LM, Satten GA, Barr JR.

FEMS Immunol Med Microbiol. 2008 Aug;53(3):333-42. doi: 10.1111/j.1574-695X.2008.00428.x. Epub 2008 Jun 5.

22.

The DNA transposon Minos as a tool for transgenesis and functional genomic analysis in vertebrates and invertebrates.

Pavlopoulos A, Oehler S, Kapetanaki MG, Savakis C.

Genome Biol. 2007;8 Suppl 1:S2. Review.

23.

Hox go omics: insights from Drosophila into Hox gene targets.

Pavlopoulos A, Akam M.

Genome Biol. 2007;8(3):208. Review.

24.

The determination of organophosphonate nerve agent metabolites in human urine by hydrophilic interaction liquid chromatography tandem mass spectrometry.

Mawhinney DB, Hamelin EI, Fraser R, Silva SS, Pavlopoulos AJ, Kobelski RJ.

J Chromatogr B Analyt Technol Biomed Life Sci. 2007 Jun 1;852(1-2):235-43. Epub 2007 Jan 26.

PMID:
17289448
25.

Botulinum neurotoxin detection and differentiation by mass spectrometry.

Barr JR, Moura H, Boyer AE, Woolfitt AR, Kalb SR, Pavlopoulos A, McWilliams LG, Schmidt JG, Martinez RA, Ashley DL.

Emerg Infect Dis. 2005 Oct;11(10):1578-83.

26.

From the mouse to the mass spectrometer: detection and differentiation of the endoproteinase activities of botulinum neurotoxins A-G by mass spectrometry.

Boyer AE, Moura H, Woolfitt AR, Kalb SR, McWilliams LG, Pavlopoulos A, Schmidt JG, Ashley DL, Barr JR.

Anal Chem. 2005 Jul 1;77(13):3916-24.

PMID:
15987092
27.

Establishing genetic transformation for comparative developmental studies in the crustacean Parhyale hawaiensis.

Pavlopoulos A, Averof M.

Proc Natl Acad Sci U S A. 2005 May 31;102(22):7888-93. Epub 2005 May 23.

29.

Standardization and denoising algorithms for mass spectra to classify whole-organism bacterial specimens.

Satten GA, Datta S, Moura H, Woolfitt AR, Carvalho Mda G, Carlone GM, De BK, Pavlopoulos A, Barr JR.

Bioinformatics. 2004 Nov 22;20(17):3128-36. Epub 2004 Jun 24.

PMID:
15217815
30.

Developmental evolution: Hox proteins ring the changes.

Pavlopoulos A, Averof M.

Curr Biol. 2002 Apr 16;12(8):R291-3.

31.

Mobility assays confirm the broad host-range activity of the Minos transposable element and validate new transformation tools.

Klinakis AG, Loukeris TG, Pavlopoulos A, Savakis C.

Insect Mol Biol. 2000 Jun;9(3):269-75.

PMID:
10886410
32.

Comparison of roxithromycin with co-amoxiclav in patients with sinusitis.

Chatzimanolis E, Marsan N, Lefatzis D, Pavlopoulos A.

J Antimicrob Chemother. 1998 Mar;41 Suppl B:81-4.

PMID:
9579718

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