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Items: 1 to 50 of 57

1.

Cross-disciplinary evolution of the genomics revolution.

Petersen AM, Majeti D, Kwon K, Ahmed ME, Pavlidis I.

Sci Adv. 2018 Aug 15;4(8):eaat4211. doi: 10.1126/sciadv.aat4211. eCollection 2018 Aug.

2.

Cloning, expression and characterization of cold active esterase (EstN7) from Bacillus cohnii strain N1: A novel member of family IV.

Noby N, Saeed H, Embaby AM, Pavlidis IV, Hussein A.

Int J Biol Macromol. 2018 Jul 29;120(Pt A):1247-1255. doi: 10.1016/j.ijbiomac.2018.07.169. [Epub ahead of print]

PMID:
30063933
3.

Dynamic quantification of migrainous thermal facial patterns - A Pilot Study.

Pavlidis IT, Garza I, Tsiamyrtzis P, Dcosta M, Swanson JW, Krouskop T, Levine J.

IEEE J Biomed Health Inform. 2018 Jul 12. doi: 10.1109/JBHI.2018.2855670. [Epub ahead of print]

PMID:
30004895
4.

Survey of potential receptivity to robotic-assisted exercise coaching in a diverse sample of smokers and nonsmokers.

Patten C, Levine J, Pavlidis I, Balls-Berry J, Shah A, Hughes C, Brockman T, Valdez Soto M, Witt D, Koepp G, Sinicrope P, Richards J.

PLoS One. 2018 May 10;13(5):e0197090. doi: 10.1371/journal.pone.0197090. eCollection 2018.

5.

S-Adenosyl-L-Homocysteine Hydrolase Inhibition by a Synthetic Nicotinamide Cofactor Biomimetic.

Kailing LL, Bertinetti D, Paul CE, Manszewski T, Jaskolski M, Herberg FW, Pavlidis IV.

Front Microbiol. 2018 Mar 21;9:505. doi: 10.3389/fmicb.2018.00505. eCollection 2018.

6.

A multimodal dataset for various forms of distracted driving.

Taamneh S, Tsiamyrtzis P, Dcosta M, Buddharaju P, Khatri A, Manser M, Ferris T, Wunderlich R, Pavlidis I.

Sci Data. 2017 Aug 15;4:170110. doi: 10.1038/sdata.2017.110.

7.

Mutations of PKA cyclic nucleotide-binding domains reveal novel aspects of cyclic nucleotide selectivity.

Lorenz R, Moon EW, Kim JJ, Schmidt SH, Sankaran B, Pavlidis IV, Kim C, Herberg FW.

Biochem J. 2017 Jul 6;474(14):2389-2403. doi: 10.1042/BCJ20160969.

8.

A coupled photometric assay for characterization of S-adenosyl-l-homocysteine hydrolases in the physiological hydrolytic direction.

Kailing LL, Bertinetti D, Herberg FW, Pavlidis IV.

N Biotechnol. 2017 Oct 25;39(Pt A):11-17. doi: 10.1016/j.nbt.2017.04.005. Epub 2017 Apr 28.

PMID:
28461153
9.

Amine Transaminase Engineering for Spatially Bulky Substrate Acceptance.

Weiß MS, Pavlidis IV, Spurr P, Hanlon SP, Wirz B, Iding H, Bornscheuer UT.

Chembiochem. 2017 Jun 1;18(11):1022-1026. doi: 10.1002/cbic.201700033. Epub 2017 Apr 27.

PMID:
28334484
10.

The ability of human nuclear DNA to cause false positive low-abundance heteroplasmy calls varies across the mitochondrial genome.

Albayrak L, Khanipov K, Pimenova M, Golovko G, Rojas M, Pavlidis I, Chumakov S, Aguilar G, Chávez A, Widger WR, Fofanov Y.

BMC Genomics. 2016 Dec 12;17(1):1017.

11.

Protein-engineering of an amine transaminase for the stereoselective synthesis of a pharmaceutically relevant bicyclic amine.

Weiß MS, Pavlidis IV, Spurr P, Hanlon SP, Wirz B, Iding H, Bornscheuer UT.

Org Biomol Chem. 2016 Nov 2;14(43):10249-10254.

PMID:
27739550
12.

Bioinformatic analysis of fold-type III PLP-dependent enzymes discovers multimeric racemases.

Knight AM, Nobili A, van den Bergh T, Genz M, Joosten HJ, Albrecht D, Riedel K, Pavlidis IV, Bornscheuer UT.

Appl Microbiol Biotechnol. 2017 Feb;101(4):1499-1507. doi: 10.1007/s00253-016-7940-7. Epub 2016 Oct 27.

PMID:
27787586
13.

Identification of (S)-selective transaminases for the asymmetric synthesis of bulky chiral amines.

Pavlidis IV, Weiß MS, Genz M, Spurr P, Hanlon SP, Wirz B, Iding H, Bornscheuer UT.

Nat Chem. 2016 Nov;8(11):1076-1082. doi: 10.1038/nchem.2578. Epub 2016 Jul 18.

PMID:
27768108
14.

Dissecting Driver Behaviors Under Cognitive, Emotional, Sensorimotor, and Mixed Stressors.

Pavlidis I, Dcosta M, Taamneh S, Manser M, Ferris T, Wunderlich R, Akleman E, Tsiamyrtzis P.

Sci Rep. 2016 May 12;6:25651. doi: 10.1038/srep25651.

15.

Graphene oxide derivatives with variable alkyl chain length and terminal functional groups as supports for stabilization of cytochrome c.

Patila M, Pavlidis IV, Kouloumpis A, Dimos K, Spyrou K, Katapodis P, Gournis D, Stamatis H.

Int J Biol Macromol. 2016 Mar;84:227-35. doi: 10.1016/j.ijbiomac.2015.12.023. Epub 2015 Dec 17.

PMID:
26706840
16.

Highly efficient and easy protease-mediated protein purification.

Last D, Müller J, Dawood AW, Moldenhauer EJ, Pavlidis IV, Bornscheuer UT.

Appl Microbiol Biotechnol. 2016 Feb;100(4):1945-53. doi: 10.1007/s00253-015-7206-9. Epub 2015 Dec 16.

PMID:
26671615
17.

Structure of product-bound SMG1 lipase: active site gating implications.

Guo S, Xu J, Pavlidis IV, Lan D, Bornscheuer UT, Liu J, Wang Y.

FEBS J. 2015 Dec;282(23):4538-47. doi: 10.1111/febs.13513. Epub 2015 Oct 1.

18.

Conversion of a Mono- and Diacylglycerol Lipase into a Triacylglycerol Lipase by Protein Engineering.

Lan D, Popowicz GM, Pavlidis IV, Zhou P, Bornscheuer UT, Wang Y.

Chembiochem. 2015 Jul 6;16(10):1431-4. doi: 10.1002/cbic.201500163. Epub 2015 May 29.

PMID:
25955297
19.

Simultaneous use of in silico design and a correlated mutation network as a tool to efficiently guide enzyme engineering.

Nobili A, Tao Y, Pavlidis IV, van den Bergh T, Joosten HJ, Tan T, Bornscheuer UT.

Chembiochem. 2015 Mar 23;16(5):805-10. doi: 10.1002/cbic.201402665. Epub 2015 Feb 25.

PMID:
25711719
20.

Connecting Past with Present: A Mixed-Methods Science Ethics Course and its Evaluation.

Semendeferi I, Tsiamyrtzis P, Dcosta M, Pavlidis I.

Sci Eng Ethics. 2016 Feb;22(1):251-74. doi: 10.1007/s11948-015-9626-4. Epub 2015 Feb 17.

PMID:
25688028
21.

Glycine oxidase based high-throughput solid-phase assay for substrate profiling and directed evolution of (R)- and (S)-selective amine transaminases.

Weiß MS, Pavlidis IV, Vickers C, Höhne M, Bornscheuer UT.

Anal Chem. 2014 Dec 2;86(23):11847-53. doi: 10.1021/ac503445y. Epub 2014 Nov 10.

PMID:
25321325
22.

A quantitative perspective on ethics in large team science.

Petersen AM, Pavlidis I, Semendeferi I.

Sci Eng Ethics. 2014 Dec;20(4):923-45. doi: 10.1007/s11948-014-9562-8. Epub 2014 Jun 12.

PMID:
24919946
23.

Graphene-based nanobiocatalytic systems: recent advances and future prospects.

Pavlidis IV, Patila M, Bornscheuer UT, Gournis D, Stamatis H.

Trends Biotechnol. 2014 Jun;32(6):312-20. doi: 10.1016/j.tibtech.2014.04.004. Epub 2014 May 1. Review.

PMID:
24794165
24.

Enzymatic conversion of flavonoids using bacterial chalcone isomerase and enoate reductase.

Gall M, Thomsen M, Peters C, Pavlidis IV, Jonczyk P, Grünert PP, Beutel S, Scheper T, Gross E, Backes M, Geissler T, Ley JP, Hilmer JM, Krammer G, Palm GJ, Hinrichs W, Bornscheuer UT.

Angew Chem Int Ed Engl. 2014 Jan 27;53(5):1439-42. doi: 10.1002/anie.201306952. Epub 2013 Dec 20.

PMID:
24459060
25.

Improved thermostability of a Bacillus subtilis esterase by domain exchange.

Gall MG, Nobili A, Pavlidis IV, Bornscheuer UT.

Appl Microbiol Biotechnol. 2014 Feb;98(4):1719-26. doi: 10.1007/s00253-013-5053-0. Epub 2013 Jun 30.

PMID:
23812333
26.

Use of 'small but smart' libraries to enhance the enantioselectivity of an esterase from Bacillus stearothermophilus towards tetrahydrofuran-3-yl acetate.

Nobili A, Gall MG, Pavlidis IV, Thompson ML, Schmidt M, Bornscheuer UT.

FEBS J. 2013 Jul;280(13):3084-93. doi: 10.1111/febs.12137. Epub 2013 Feb 14.

27.

Spatiotemporal reconstruction of the breathing function.

Duong D, Shastri D, Tsiamyrtzis P, Pavlidis I.

Med Image Comput Comput Assist Interv. 2012;15(Pt 1):149-56.

PMID:
23285546
28.

Spatiotemporal smoothing as a basis for facial tissue tracking in thermal imaging.

Zhou Y, Tsiamyrtzis P, Lindner P, Timofeyev I, Pavlidis I.

IEEE Trans Biomed Eng. 2013 May;60(5):1280-9. doi: 10.1109/TBME.2012.2232927. Epub 2012 Dec 11.

PMID:
23247840
29.

Fast by nature - how stress patterns define human experience and performance in dexterous tasks.

Pavlidis I, Tsiamyrtzis P, Shastri D, Wesley A, Zhou Y, Lindner P, Buddharaju P, Joseph R, Mandapati A, Dunkin B, Bass B.

Sci Rep. 2012;2:305. doi: 10.1038/srep00305. Epub 2012 Mar 6.

30.

Evaluation of the Accuracy of a Triaxial Accelerometer Embedded into a Cell Phone Platform for Measuring Physical Activity.

Manohar CU, McCrady SK, Fujiki Y, Pavlidis IT, Levine JA.

J Obes Weight Loss Ther. 2011 Dec 20;1(106). pii: 3309.

31.

Development of effective nanobiocatalytic systems through the immobilization of hydrolases on functionalized carbon-based nanomaterials.

Pavlidis IV, Vorhaben T, Tsoufis T, Rudolf P, Bornscheuer UT, Gournis D, Stamatis H.

Bioresour Technol. 2012 Jul;115:164-71. doi: 10.1016/j.biortech.2011.11.007. Epub 2011 Nov 10.

PMID:
22113071
32.

Life events and dementia: what is the nature of their relationship?

Fountoulakis KN, Pavlidis I, Tsolaki M.

Psychiatry Res. 2011 Nov 30;190(1):156-8. doi: 10.1016/j.psychres.2011.05.011. Epub 2011 May 31.

PMID:
21621852
33.

Collaborative tracking for MRI-guided robotic intervention on the beating heart.

Zhou Y, Yeniaras E, Tsiamyrtzis P, Tsekos N, Pavlidis I.

Med Image Comput Comput Assist Interv. 2010;13(Pt 3):351-8.

PMID:
20879419
34.

Water-in-ionic liquid microemulsion-based organogels as novel matrices for enzyme immobilization.

Pavlidis IV, Tzafestas K, Stamatis H.

Biotechnol J. 2010 Aug;5(8):805-12. doi: 10.1002/biot.201000052.

PMID:
20449844
35.

An accelerometer-based earpiece to monitor and quantify physical activity.

Manohar C, McCrady S, Pavlidis IT, Levine JA.

J Phys Act Health. 2009 Nov;6(6):781-9.

36.

Description and clinical studies of a device for the instantaneous detection of office-place stress.

Levine JA, Pavlidis IT, MacBride L, Zhu Z, Tsiamyrtzis P.

Work. 2009;34(3):359-64. doi: 10.3233/WOR-2009-0934.

PMID:
20037251
37.

Thermal infrared imaging: a novel method to monitor airflow during polysomnography.

Murthy JN, van Jaarsveld J, Fei J, Pavlidis I, Harrykissoon RI, Lucke JF, Faiz S, Castriotta RJ.

Sleep. 2009 Nov;32(11):1521-7.

38.

Lipase immobilization on smectite nanoclays: characterization and application to the epoxidation of alpha-pinene.

Tzialla AA, Pavlidis IV, Felicissimo MP, Rudolf P, Gournis D, Stamatis H.

Bioresour Technol. 2010 Mar;101(6):1587-94. doi: 10.1016/j.biortech.2009.10.023. Epub 2009 Nov 11.

PMID:
19910187
39.

Thermistor at a distance: unobtrusive measurement of breathing.

Fei J, Pavlidis I.

IEEE Trans Biomed Eng. 2010 Apr;57(4):988-98. doi: 10.1109/TBME.2009.2032415. Epub 2009 Sep 29.

PMID:
19789102
40.

Imaging facial signs of neurophysiological responses.

Shastri D, Merla A, Tsiamyrtzis P, Pavlidis I.

IEEE Trans Biomed Eng. 2009 Feb;56(2):477-84. doi: 10.1109/TBME.2008.2003265. Epub 2008 Aug 15.

PMID:
19272941
41.

Periorbital thermal signal extraction and applications.

Shastri D, Tsiamyrtzis P, Pavlidis I.

Conf Proc IEEE Eng Med Biol Soc. 2008;2008:102-5. doi: 10.1109/IEMBS.2008.4649101.

PMID:
19162604
42.

Tissue tracking in thermo-physiological imagery through spatio-temporal smoothing.

Zhou Y, Tsiamyrtzis P, Pavlidis IT.

Med Image Comput Comput Assist Interv. 2009;12(Pt 2):1092-9.

PMID:
20426220
43.

Thermal vision for sleep apnea monitoring.

Fei J, Pavlidis I, Murthy J.

Med Image Comput Comput Assist Interv. 2009;12(Pt 2):1084-91.

PMID:
20426219
44.

Virtual thermistor.

Fei J, Pavlidis I.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:250-3.

PMID:
18001937
45.

Forehead thermal signature extraction in lie detection.

Zhu Z, Tsiamyrtzis P, Pavlidis I.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:243-6.

PMID:
18001935
46.

Counting heartbeats at a distance.

Sun N, Pavlidis I.

Conf Proc IEEE Eng Med Biol Soc. 2006;1:228-31.

PMID:
17946388
47.

Analysis of breathing air flow patterns in thermal imaging.

Fei J, Pavlidis I.

Conf Proc IEEE Eng Med Biol Soc. 2006;1:946-52.

PMID:
17945610
48.

Contact-free measurement of cardiac pulse based on the analysis of thermal imagery.

Garbey M, Sun N, Merla A, Pavlidis I.

IEEE Trans Biomed Eng. 2007 Aug;54(8):1418-26.

PMID:
17694862
49.

Harvesting the thermal cardiac pulse signal.

Sun N, Pavlidis I, Garbey M, Fei J.

Med Image Comput Comput Assist Interv. 2006;9(Pt 2):569-76.

PMID:
17354818
50.

Physiology-based face recognition in the thermal infrared spectrum.

Buddharaju P, Pavlidis IT, Tsiamyrtzis P, Bazakos M.

IEEE Trans Pattern Anal Mach Intell. 2007 Apr;29(4):613-26.

PMID:
17299219

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