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A cautionary tale on using imputation methods for inference in matched pairs design.

Ramosaj B, Amro L, Pauly M.

Bioinformatics. 2020 Feb 12. pii: btaa082. doi: 10.1093/bioinformatics/btaa082. [Epub ahead of print]


Development of an antibody cocktail for treatment of Sudan virus infection.

Herbert AS, Froude JW, Ortiz RA, Kuehne AI, Dorosky DE, Bakken RR, Zak SE, Josleyn NM, Musiychuk K, Jones RM, Green B, Streatfield SJ, Wec AZ, Bohorova N, Bohorov O, Kim DH, Pauly MH, Velasco J, Whaley KJ, Stonier SW, Bornholdt ZA, Chandran K, Zeitlin L, Sampey D, Yusibov V, Dye JM.

Proc Natl Acad Sci U S A. 2020 Feb 18;117(7):3768-3778. doi: 10.1073/pnas.1914985117. Epub 2020 Feb 3.


When Should Medicare Mandate Participation In Alternative Payment Models?

Liao JM, Pauly MV, Navathe AS.

Health Aff (Millwood). 2020 Feb;39(2):305-309. doi: 10.1377/hlthaff.2019.00570.


"Twitching" and Stiffness in POLG1 Mutation Carriers: Red Flag or Red Herring?

Pauly MG, Tunc S, Bäumer T, Gillessen-Kaesbach G, Münchau A.

Mov Disord Clin Pract. 2019 Nov 12;7(1):91-93. doi: 10.1002/mdc3.12860. eCollection 2020 Jan. No abstract available.


A simulation study to compare robust tests for linear mixed-effects meta-regression.

Welz T, Pauly M.

Res Synth Methods. 2020 Jan 12. doi: 10.1002/jrsm.1388. [Epub ahead of print]


Home-Based Physical Activity and Diet Intervention to Improve Physical Function in Advanced Liver Disease: A Randomized Pilot Trial.

Chen HW, Ferrando A, White MG, Dennis RA, Xie J, Pauly M, Park S, Bartter T, Dunn MA, Ruiz-Margain A, Kim WR, Duarte-Rojo A.

Dig Dis Sci. 2020 Jan 6. doi: 10.1007/s10620-019-06034-2. [Epub ahead of print]


High prevalence of helminth infections in mother-child pairs from three central provinces of Lao People's Democratic Republic.

Pauly M, Sayasinh K, Muller CP, Sayasone S, Black AP.

Parasite Epidemiol Control. 2019 Nov 2;7:e00122. doi: 10.1016/j.parepi.2019.e00122. eCollection 2019 Nov.


In-plane aligned assemblies of 1D-nanoobjects: recent approaches and applications.

Hu H, Wang S, Feng X, Pauly M, Decher G, Long Y.

Chem Soc Rev. 2020 Jan 27;49(2):509-553. doi: 10.1039/c9cs00382g. Review.


Innovative particle standards and long-lived imaging for 2D and 3D dSTORM.

Provost A, Rousset C, Bourdon L, Mezhoud S, Reungoat E, Fourneaux C, Bresson T, Pauly M, Béard N, Possi-Tchouanlong L, Grigorov B, Bouvet P, Diaz JJ, Chamot C, Pécheur EI, Ladavière C, Charreyre MT, Favier A, Place C, Monier K.

Sci Rep. 2019 Nov 29;9(1):17967. doi: 10.1038/s41598-019-53528-0.


The Suitability of Orthogonal Hosts to Study Plant Cell Wall Biosynthesis.

Pauly M, Gawenda N, Wagner C, Fischbach P, Ramírez V, Axmann IM, Voiniciuc C.

Plants (Basel). 2019 Nov 17;8(11). pii: E516. doi: 10.3390/plants8110516. Review.


Regulation of acetylation of plant cell wall components is complex and responds to external stimuli.

Sinclair SA, Gille S, Pauly M, Krämer U.

Plant Signal Behav. 2020;15(1):1687185. doi: 10.1080/15592324.2019.1687185. Epub 2019 Nov 7.


Novel Polyomaviruses in Mammals from Multiple Orders and Reassessment of Polyomavirus Evolution and Taxonomy.

Ehlers B, Anoh AE, Ben Salem N, Broll S, Couacy-Hymann E, Fischer D, Gedvilaite A, Ingenhütt N, Liebmann S, Martin M, Mossoun A, Mugisha L, Muyembe-Tamfum JJ, Pauly M, Pérez de Val B, Preugschas H, Richter D, Schubert G, Szentiks CA, Teichmann T, Walter C, Ulrich RG, Wiersma L, Leendertz FH, Calvignac-Spencer S.

Viruses. 2019 Oct 10;11(10). pii: E930. doi: 10.3390/v11100930.


OrganoCat Fractionation of Empty Fruit Bunches from Palm Trees into Lignin, Sugars, and Cellulose-Enriched Pulp.

Grande PM, Weidener D, Dietrich S, Dama M, Bellof M, Maas R, Pauly M, Leitner W, Klose H, Domínguez de María P.

ACS Omega. 2019 Aug 29;4(11):14451-14457. doi: 10.1021/acsomega.9b01371. eCollection 2019 Sep 10.


Impact of nucleic acid extraction platforms on hepatitis virus genome detection.

Pauly MD, Kamili S, Hayden TM.

J Virol Methods. 2019 Nov;273:113715. doi: 10.1016/j.jviromet.2019.113715. Epub 2019 Aug 13.


Addressing the Value of Multidisciplinary Clinical Care in Huntington's Disease: A Snapshot of a New Huntington's Disease Center.

Bardakjian TM, Klapper J, Carey A, Wood J, Pauly M, Gasper K, Lawler K, Tran B, Bell Y, Zwil A, Gonzalez-Alegre P.

J Huntingtons Dis. 2019;8(4):501-507. doi: 10.3233/JHD-190355.


The natural egocenter: An experimental account of locating the self.

Schäfer S, Wentura D, Pauly M, Frings C.

Conscious Cogn. 2019 Sep;74:102775. doi: 10.1016/j.concog.2019.102775. Epub 2019 Jul 3.


Policy Flight Simulators: Accelerating Decisions to Adopt Evidence-Based Health Interventions.

Rouse WB, Naylor MD, Yu Z, Pennock MJ, Hirschman KB, Pauly MV, Pepe KM.

J Healthc Manag. 2019 Jul-Aug;64(4):231-241. doi: 10.1097/JHM-D-18-00114.


Clinical outcome after decompression of intraneural peroneal ganglion cyst and its morphologic correlation to postoperative nerve ultrasound.

Knoll A, Pal'a A, Pedro MT, Bäzner U, Schneider M, König RW, Wirtz CR, Friedrich S, Pauly M, Antoniadis G.

J Neurosurg. 2019 Jun 28:1-7. doi: 10.3171/2019.3.JNS182699. [Epub ahead of print]


Genetic dissection of cell wall defects and the strigolactone pathway in Arabidopsis.

Ramírez V, Pauly M.

Plant Direct. 2019 Jun 22;3(6):e00149. doi: 10.1002/pld3.149. eCollection 2019 Jun.


A sorghum NAC gene is associated with variation in biomass properties and yield potential.

Xia J, Zhao Y, Burks P, Pauly M, Brown PJ.

Plant Direct. 2018 Jul 23;2(7):e00070. doi: 10.1002/pld3.70. eCollection 2018 Jul.


Growth- and stress-related defects associated with wall hypoacetylation are strigolactone-dependent.

Ramírez V, Xiong G, Mashiguchi K, Yamaguchi S, Pauly M.

Plant Direct. 2018 Jun 13;2(6):e00062. doi: 10.1002/pld3.62. eCollection 2018 Jun.


Cross-species transmission of poultry pathogens in backyard farms: ducks as carriers of chicken viruses.

Pauly M, Snoeck CJ, Phoutana V, Keosengthong A, Sausy A, Khenkha L, Nouanthong P, Samountry B, Jutavijittum P, Vilivong K, Hübschen JM, Black AP, Pommasichan S, Muller CP.

Avian Pathol. 2019 Dec;48(6):503-511. doi: 10.1080/03079457.2019.1628919. Epub 2019 Jul 24.


Multiplication-combination tests for incomplete paired data.

Amro L, Konietschke F, Pauly M.

Stat Med. 2019 Jul 30;38(17):3243-3255. doi: 10.1002/sim.8178. Epub 2019 May 17.


Chronic neuromuscular electrical stimulation improves muscle mass and insulin sensitivity in a mouse model.

Lotri-Koffi A, Pauly M, Lemarié E, Godin-Ribuot D, Tamisier R, Pépin JL, Vivodtzev I.

Sci Rep. 2019 May 10;9(1):7252. doi: 10.1038/s41598-019-43696-4.


Somatosensory-motor cortex interactions measured using dual-site transcranial magnetic stimulation.

Brown MJN, Weissbach A, Pauly MG, Vesia M, Gunraj C, Baarbé J, Münchau A, Bäumer T, Chen R.

Brain Stimul. 2019 Sep - Oct;12(5):1229-1243. doi: 10.1016/j.brs.2019.04.009. Epub 2019 Apr 23.


Prevalence of Spontaneous Clearance of Hepatitis C Virus Infection Doubled From 1998 to 2017.

Seo S, Silverberg MJ, Hurley LB, Ready J, Saxena V, Witt D, Hare CB, Champsi JH, Korn DG, Pauly MP, Chamberland S, Lai JB, Marcus JL.

Clin Gastroenterol Hepatol. 2020 Feb;18(2):511-513. doi: 10.1016/j.cgh.2019.04.035. Epub 2019 Apr 19.


Confidence bands for multiplicative hazards models: Flexible resampling approaches.

Dobler D, Pauly M, Scheike T.

Biometrics. 2019 Sep;75(3):906-916. doi: 10.1111/biom.13059. Epub 2019 Apr 17.


Deposition of lignin in four species of Saccharum.

Llerena JPP, Figueiredo R, Brito MDS, Kiyota E, Mayer JLS, Araujo P, Schimpl FC, Dama M, Pauly M, Mazzafera P.

Sci Rep. 2019 Apr 10;9(1):5877. doi: 10.1038/s41598-019-42350-3.


Diversified local CRISPR-Cas immunity to viruses of Sulfolobus islandicus.

Pauly MD, Bautista MA, Black JA, Whitaker RJ.

Philos Trans R Soc Lond B Biol Sci. 2019 May 13;374(1772):20180093. doi: 10.1098/rstb.2018.0093.


Factorial analyses of treatment effects under independent right-censoring.

Dobler D, Pauly M.

Stat Methods Med Res. 2020 Feb;29(2):325-343. doi: 10.1177/0962280219831316. Epub 2019 Mar 5.


Coordination of Care or Conflict of Interest? Exempting ACOs from the Stark Law.

Kanter GP, Pauly MV.

N Engl J Med. 2019 Jan 31;380(5):410-411. doi: 10.1056/NEJMp1811304. No abstract available.


A Two-Antibody Pan-Ebolavirus Cocktail Confers Broad Therapeutic Protection in Ferrets and Nonhuman Primates.

Bornholdt ZA, Herbert AS, Mire CE, He S, Cross RW, Wec AZ, Abelson DM, Geisbert JB, James RM, Rahim MN, Zhu W, Borisevich V, Banadyga L, Gunn BM, Agans KN, Wirchnianski AS, Goodwin E, Tierney K, Shestowsky WS, Bohorov O, Bohorova N, Velasco J, Ailor E, Kim D, Pauly MH, Whaley KJ, Alter G, Walker LM, Chandran K, Zeitlin L, Qiu X, Geisbert TW, Dye JM.

Cell Host Microbe. 2019 Jan 9;25(1):49-58.e5. doi: 10.1016/j.chom.2018.12.005.


Development of a Human Antibody Cocktail that Deploys Multiple Functions to Confer Pan-Ebolavirus Protection.

Wec AZ, Bornholdt ZA, He S, Herbert AS, Goodwin E, Wirchnianski AS, Gunn BM, Zhang Z, Zhu W, Liu G, Abelson DM, Moyer CL, Jangra RK, James RM, Bakken RR, Bohorova N, Bohorov O, Kim DH, Pauly MH, Velasco J, Bortz RH 3rd, Whaley KJ, Goldstein T, Anthony SJ, Alter G, Walker LM, Dye JM, Zeitlin L, Qiu X, Chandran K.

Cell Host Microbe. 2019 Jan 9;25(1):39-48.e5. doi: 10.1016/j.chom.2018.12.004.


Rescue of rhesus macaques from the lethality of aerosolized ricin toxin.

Roy CJ, Ehrbar DJ, Bohorova N, Bohorov O, Kim D, Pauly M, Whaley K, Rong Y, Torres-Velez FJ, Vitetta ES, Didier PJ, Doyle-Meyers L, Zeitlin L, Mantis NJ.

JCI Insight. 2019 Jan 10;4(1). pii: 124771. doi: 10.1172/jci.insight.124771. [Epub ahead of print]


Small-sample performance and underlying assumptions of a bootstrap-based inference method for a general analysis of covariance model with possibly heteroskedastic and nonnormal errors.

Zimmermann G, Pauly M, Bathke AC.

Stat Methods Med Res. 2019 Dec;28(12):3808-3821. doi: 10.1177/0962280218817796. Epub 2019 Jan 2.


Mechanistic insights from plant heteromannan synthesis in yeast.

Voiniciuc C, Dama M, Gawenda N, Stritt F, Pauly M.

Proc Natl Acad Sci U S A. 2019 Jan 8;116(2):522-527. doi: 10.1073/pnas.1814003116. Epub 2018 Dec 24.


Rosai-Dorfman disease with isolated lacrimal gland enlargement.

Pauly M, Naik M, Subramanian K, Anantharaman G.

Oman J Ophthalmol. 2018 Sep-Dec;11(3):297-299. doi: 10.4103/ojo.OJO_110_2016.


Semi-parametric analysis of overdispersed count and metric data with varying follow-up times: Asymptotic theory and small sample approximations.

Konietschke F, Friede T, Pauly M.

Biom J. 2019 May;61(3):616-629. doi: 10.1002/bimj.201800027. Epub 2018 Dec 5.


Switching to High-Deductible Health Plans: It Is Going to Be a Bumpy Ride.

Pauly MV.

Ann Intern Med. 2018 Dec 18;169(12):879-880. doi: 10.7326/M18-2825. Epub 2018 Nov 20. No abstract available.


Evaluating approaches to enhance survival in children with hypodiploid acute lymphoblastic leukaemia (ALL).

Miller L, Kobayashi S, Pauly M, Lew G, Saxe D, Keller F, Qayed M, Castellino S.

Br J Haematol. 2019 May;185(3):613-616. doi: 10.1111/bjh.15590. Epub 2018 Sep 26. No abstract available.


SHOU4 Proteins Regulate Trafficking of Cellulose Synthase Complexes to the Plasma Membrane.

Polko JK, Barnes WJ, Voiniciuc C, Doctor S, Steinwand B, Hill JL Jr, Tien M, Pauly M, Anderson CT, Kieber JJ.

Curr Biol. 2018 Oct 8;28(19):3174-3182.e6. doi: 10.1016/j.cub.2018.07.076. Epub 2018 Sep 20.


Subfossil trees suggest enhanced Mediterranean hydroclimate variability at the onset of the Younger Dryas.

Pauly M, Helle G, Miramont C, Büntgen U, Treydte K, Reinig F, Guibal F, Sivan O, Heinrich I, Riedel F, Kromer B, Balanzategui D, Wacker L, Sookdeo A, Brauer A.

Sci Rep. 2018 Sep 18;8(1):13980. doi: 10.1038/s41598-018-32251-2.


Cost impact of the transitional care model for hospitalized cognitively impaired older adults.

Pauly MV, Hirschman KB, Hanlon AL, Huang L, Bowles KH, Bradway C, McCauley K, Naylor MD.

J Comp Eff Res. 2018 Sep;7(9):913-922. doi: 10.2217/cer-2018-0040. Epub 2018 Sep 11.


New Insights Into Wall Polysaccharide O-Acetylation.

Pauly M, Ramírez V.

Front Plant Sci. 2018 Aug 21;9:1210. doi: 10.3389/fpls.2018.01210. eCollection 2018. Review.


High circulation of Hepatitis E virus in pigs and professionals exposed to pigs in Laos.

Khounvisith V, Tritz S, Khenkha L, Phoutana V, Keosengthong A, Pommasichan S, Nouanthong P, Hübschen JM, Snoeck CJ, Reinharz D, Muller CP, Black AP, Pauly M.

Zoonoses Public Health. 2018 Dec;65(8):1020-1026. doi: 10.1111/zph.12520. Epub 2018 Aug 27.


Systematic Analysis of Monoclonal Antibodies against Ebola Virus GP Defines Features that Contribute to Protection.

Saphire EO, Schendel SL, Fusco ML, Gangavarapu K, Gunn BM, Wec AZ, Halfmann PJ, Brannan JM, Herbert AS, Qiu X, Wagh K, He S, Giorgi EE, Theiler J, Pommert KBJ, Krause TB, Turner HL, Murin CD, Pallesen J, Davidson E, Ahmed R, Aman MJ, Bukreyev A, Burton DR, Crowe JE Jr, Davis CW, Georgiou G, Krammer F, Kyratsous CA, Lai JR, Nykiforuk C, Pauly MH, Rijal P, Takada A, Townsend AR, Volchkov V, Walker LM, Wang CI, Zeitlin L, Doranz BJ, Ward AB, Korber B, Kobinger GP, Andersen KG, Kawaoka Y, Alter G, Chandran K, Dye JM; Viral Hemorrhagic Fever Immunotherapeutic Consortium.

Cell. 2018 Aug 9;174(4):938-952.e13. doi: 10.1016/j.cell.2018.07.033.


Contractile activity attenuates autophagy suppression and reverses mitochondrial defects in skeletal muscle cells.

Parousis A, Carter HN, Tran C, Erlich AT, Mesbah Moosavi ZS, Pauly M, Hood DA.

Autophagy. 2018;14(11):1886-1897. doi: 10.1080/15548627.2018.1491488. Epub 2018 Aug 4.


Germline mutations in the bone marrow microenvironment and dysregulated hematopoiesis.

Miller LH, Qu CK, Pauly M.

Exp Hematol. 2018 Oct;66:17-26. doi: 10.1016/j.exphem.2018.07.001. Epub 2018 Aug 1. Review.


Contribution to the discussion of "When should meta-analysis avoid making hidden normality assumptions?"

Pauly M, Welz T.

Biom J. 2018 Nov;60(6):1075-1076. doi: 10.1002/bimj.201800184. Epub 2018 Aug 1. No abstract available.


Adaptations of the evidence-based Transitional Care Model in the U.S.

Naylor MD, Hirschman KB, Toles MP, Jarrín OF, Shaid E, Pauly MV.

Soc Sci Med. 2018 Sep;213:28-36. doi: 10.1016/j.socscimed.2018.07.023. Epub 2018 Jul 17.


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