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Items: 1 to 50 of 85

1.

Quantitative proteomic analysis of small and large extracellular vesicles (EVs) reveals enrichment of adhesion proteins in small EVs.

Jimenez L, Yu H, McKenzie A, Franklin JL, Patton JG, Liu Q, Weaver AM.

J Proteome Res. 2019 Jan 4. doi: 10.1021/acs.jproteome.8b00647. [Epub ahead of print]

PMID:
30608700

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2.

Diverse Long RNAs Are Differentially Sorted into Extracellular Vesicles Secreted by Colorectal Cancer Cells.

Hinger SA, Cha DJ, Franklin JL, Higginbotham JN, Dou Y, Ping J, Shu L, Prasad N, Levy S, Zhang B, Liu Q, Weaver AM, Coffey RJ, Patton JG.

Cell Rep. 2018 Oct 16;25(3):715-725.e4. doi: 10.1016/j.celrep.2018.09.054.

PMID:
30332650
Free PMC Article

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3.

Genome-wide microRNA screening in Nile tilapia reveals pervasive isomiRs' transcription, sex-biased arm switching and increasing complexity of expression throughout development.

Pinhal D, Bovolenta LA, Moxon S, Oliveira AC, Nachtigall PG, Acencio ML, Patton JG, Hilsdorf AWS, Lemke N, Martins C.

Sci Rep. 2018 May 29;8(1):8248. doi: 10.1038/s41598-018-26607-x.

PMID:
29844338
Free PMC Article

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4.

lncRNA MIR100HG-derived miR-100 and miR-125b mediate cetuximab resistance via Wnt/β-catenin signaling.

Lu Y, Zhao X, Liu Q, Li C, Graves-Deal R, Cao Z, Singh B, Franklin JL, Wang J, Hu H, Wei T, Yang M, Yeatman TJ, Lee E, Saito-Diaz K, Hinger S, Patton JG, Chung CH, Emmrich S, Klusmann JH, Fan D, Coffey RJ.

Nat Med. 2017 Nov;23(11):1331-1341. doi: 10.1038/nm.4424. Epub 2017 Oct 16.

PMID:
29035371
Free PMC Article

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5.

miR-27 regulates chondrogenesis by suppressing focal adhesion kinase during pharyngeal arch development.

Kara N, Wei C, Commanday AC, Patton JG.

Dev Biol. 2017 Sep 1;429(1):321-334. doi: 10.1016/j.ydbio.2017.06.013. Epub 2017 Jun 16.

PMID:
28625871
Free PMC Article

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6.

Blocking Zebrafish MicroRNAs with Morpholinos.

Flynt AS, Rao M, Patton JG.

Methods Mol Biol. 2017;1565:59-78. doi: 10.1007/978-1-4939-6817-6_6.

PMID:
28364234

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7.

Neurotransmitter-Regulated Regeneration in the Zebrafish Retina.

Rao MB, Didiano D, Patton JG.

Stem Cell Reports. 2017 Apr 11;8(4):831-842. doi: 10.1016/j.stemcr.2017.02.007. Epub 2017 Mar 9.

PMID:
28285877
Free PMC Article

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8.

Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosomes.

Dou Y, Cha DJ, Franklin JL, Higginbotham JN, Jeppesen DK, Weaver AM, Prasad N, Levy S, Coffey RJ, Patton JG, Zhang B.

Sci Rep. 2016 Nov 28;6:37982. doi: 10.1038/srep37982.

PMID:
27892494
Free PMC Article

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9.

A transcription factor network controls cell migration and fate decisions in the developing zebrafish pineal complex.

Khuansuwan S, Clanton JA, Dean BJ, Patton JG, Gamse JT.

Development. 2016 Jul 15;143(14):2641-50. doi: 10.1242/dev.131680. Epub 2016 Jun 17.

PMID:
27317804
Free PMC Article

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10.

Identification of a Paralog-Specific Notch1 Intracellular Domain Degron.

Broadus MR, Chen TW, Neitzel LR, Ng VH, Jodoin JN, Lee LA, Salic A, Robbins DJ, Capobianco AJ, Patton JG, Huppert SS, Lee E.

Cell Rep. 2016 May 31;15(9):1920-9. doi: 10.1016/j.celrep.2016.04.070. Epub 2016 May 19.

PMID:
27210761
Free PMC Article

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11.

KRAS-MEK Signaling Controls Ago2 Sorting into Exosomes.

McKenzie AJ, Hoshino D, Hong NH, Cha DJ, Franklin JL, Coffey RJ, Patton JG, Weaver AM.

Cell Rep. 2016 May 3;15(5):978-987. doi: 10.1016/j.celrep.2016.03.085. Epub 2016 Apr 21.

PMID:
27117408
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12.

Biogenesis, delivery, and function of extracellular RNA.

Patton JG, Franklin JL, Weaver AM, Vickers K, Zhang B, Coffey RJ, Ansel KM, Blelloch R, Goga A, Huang B, L'Etoille N, Raffai RL, Lai CP, Krichevsky AM, Mateescu B, Greiner VJ, Hunter C, Voinnet O, McManus MT.

J Extracell Vesicles. 2015 Aug 28;4:27494. doi: 10.3402/jev.v4.27494. eCollection 2015.

PMID:
26320939
Free PMC Article

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13.

KRAS-dependent sorting of miRNA to exosomes.

Cha DJ, Franklin JL, Dou Y, Liu Q, Higginbotham JN, Demory Beckler M, Weaver AM, Vickers K, Prasad N, Levy S, Zhang B, Coffey RJ, Patton JG.

Elife. 2015 Jul 1;4:e07197. doi: 10.7554/eLife.07197.

PMID:
26132860
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14.

Multiplex Conditional Mutagenesis Using Transgenic Expression of Cas9 and sgRNAs.

Yin L, Maddison LA, Li M, Kara N, LaFave MC, Varshney GK, Burgess SM, Patton JG, Chen W.

Genetics. 2015 Jun;200(2):431-41. doi: 10.1534/genetics.115.176917. Epub 2015 Apr 8.

PMID:
25855067
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15.

miR-216a regulates snx5, a novel notch signaling pathway component, during zebrafish retinal development.

Olena AF, Rao MB, Thatcher EJ, Wu SY, Patton JG.

Dev Biol. 2015 Apr 1;400(1):72-81. doi: 10.1016/j.ydbio.2015.01.016. Epub 2015 Jan 31.

PMID:
25645681
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16.

Technical brief: Constant intense light exposure to lesion and initiate regeneration in normally pigmented zebrafish.

Rajaram K, Summerbell ER, Patton JG.

Mol Vis. 2014 Jul 31;20:1075-84. eCollection 2014.

PMID:
25324680
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17.

Dynamic miRNA expression patterns during retinal regeneration in zebrafish: reduced dicer or miRNA expression suppresses proliferation of Müller glia-derived neuronal progenitor cells.

Rajaram K, Harding RL, Bailey T, Patton JG, Hyde DR.

Dev Dyn. 2014 Dec;243(12):1591-605. doi: 10.1002/dvdy.24188. Epub 2014 Oct 10.

PMID:
25220904
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18.

RNAi-mediated gene silencing in zebrafish triggered by convergent transcription.

Andrews OE, Cha DJ, Wei C, Patton JG.

Sci Rep. 2014 Jun 9;4:5222. doi: 10.1038/srep05222.

PMID:
24909225
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19.

miR-203 regulates progenitor cell proliferation during adult zebrafish retina regeneration.

Rajaram K, Harding RL, Hyde DR, Patton JG.

Dev Biol. 2014 Aug 15;392(2):393-403. doi: 10.1016/j.ydbio.2014.05.005. Epub 2014 May 20.

PMID:
24858486
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20.

Strain-specific suppression of microRNA-320 by carcinogenic Helicobacter pylori promotes expression of the antiapoptotic protein Mcl-1.

Noto JM, Piazuelo MB, Chaturvedi R, Bartel CA, Thatcher EJ, Delgado A, Romero-Gallo J, Wilson KT, Correa P, Patton JG, Peek RM Jr.

Am J Physiol Gastrointest Liver Physiol. 2013 Dec;305(11):G786-96. doi: 10.1152/ajpgi.00279.2013. Epub 2013 Oct 17.

PMID:
24136787
Free PMC Article

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21.

miR-153 regulates SNAP-25, synaptic transmission, and neuronal development.

Wei C, Thatcher EJ, Olena AF, Cha DJ, Perdigoto AL, Marshall AF, Carter BD, Broadie K, Patton JG.

PLoS One. 2013;8(2):e57080. doi: 10.1371/journal.pone.0057080. Epub 2013 Feb 25.

PMID:
23451149
Free PMC Article

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22.

Transcriptome-wide analysis of small RNA expression in early zebrafish development.

Wei C, Salichos L, Wittgrove CM, Rokas A, Patton JG.

RNA. 2012 May;18(5):915-29. doi: 10.1261/rna.029090.111. Epub 2012 Mar 8.

PMID:
22408181
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23.

Regulation of endoderm formation and left-right asymmetry by miR-92 during early zebrafish development.

Li N, Wei C, Olena AF, Patton JG.

Development. 2011 May;138(9):1817-26. doi: 10.1242/dev.056697. Epub 2011 Mar 29.

PMID:
21447552
Free PMC Article

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24.

Small RNAs have a big impact on regeneration.

Thatcher EJ, Patton JG.

RNA Biol. 2010 May-Jun;7(3):333-8. Epub 2010 May 14. Review.

PMID:
20458186
Free PMC Article

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25.

Analysis of SRrp86-regulated alternative splicing: control of c-Jun and IκBβ activity.

Solis AS, Patton JG.

RNA Biol. 2010 Jul-Aug;7(4):486-94. Epub 2010 Jul 1.

PMID:
20400856
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26.

Crosstalk between planar cell polarity signaling and miR-8 control of NHERF1-mediated actin reorganization.

Flynt AS, Patton JG.

Cell Cycle. 2010 Jan 15;9(2):235-7. Epub 2010 Jan 26.

PMID:
20023383
Free PMC Article

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27.

Genomic organization of microRNAs.

Olena AF, Patton JG.

J Cell Physiol. 2010 Mar;222(3):540-5. doi: 10.1002/jcp.21993. Review.

PMID:
20020507
Free PMC Article

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28.

A molecular basis for variation in clinical severity of isolated growth hormone deficiency type II.

Hamid R, Phillips JA 3rd, Holladay C, Cogan JD, Austin ED, Backeljauw PF, Travers SH, Patton JG.

J Clin Endocrinol Metab. 2009 Dec;94(12):4728-34. doi: 10.1210/jc.2009-0746. Epub 2009 Oct 16.

PMID:
19837935
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29.

The role of miR-124a in early development of the Xenopus eye.

Qiu R, Liu K, Liu Y, Mo W, Flynt AS, Patton JG, Kar A, Wu JY, He R.

Mech Dev. 2009 Oct;126(10):804-16. doi: 10.1016/j.mod.2009.08.002. Epub 2009 Aug 22.

PMID:
19703558
Free PMC Article

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30.

miR-8 microRNAs regulate the response to osmotic stress in zebrafish embryos.

Flynt AS, Thatcher EJ, Burkewitz K, Li N, Liu Y, Patton JG.

J Cell Biol. 2009 Apr 6;185(1):115-27. doi: 10.1083/jcb.200807026. Epub 2009 Mar 30.

PMID:
19332888
Free PMC Article

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31.

Regulation of zebrafish fin regeneration by microRNAs.

Thatcher EJ, Paydar I, Anderson KK, Patton JG.

Proc Natl Acad Sci U S A. 2008 Nov 25;105(47):18384-9. doi: 10.1073/pnas.0803713105. Epub 2008 Nov 17.

PMID:
19015519
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32.

Growth hormone deficiency and splicing fidelity: two serine/arginine-rich proteins, ASF/SF2 and SC35, act antagonistically.

Solis AS, Peng R, Crawford JB, Phillips JA 3rd, Patton JG.

J Biol Chem. 2008 Aug 29;283(35):23619-26. doi: 10.1074/jbc.M710175200. Epub 2008 Jun 27.

PMID:
18586677
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33.

Dispatched Homolog 2 is targeted by miR-214 through a combination of three weak microRNA recognition sites.

Li N, Flynt AS, Kim HR, Solnica-Krezel L, Patton JG.

Nucleic Acids Res. 2008 Aug;36(13):4277-85. doi: 10.1093/nar/gkn388. Epub 2008 Jun 26.

PMID:
18583362
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34.

Isolated growth hormone deficiency type II caused by a point mutation that alters both splice site strength and splicing enhancer function.

Shariat N, Holladay CD, Cleary RK, Phillips JA 3rd, Patton JG.

Clin Genet. 2008 Dec;74(6):539-45. doi: 10.1111/j.1399-0004.2008.01042.x. Epub 2008 Jun 11.

PMID:
18554279
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35.

Genomic organization of zebrafish microRNAs.

Thatcher EJ, Bond J, Paydar I, Patton JG.

BMC Genomics. 2008 May 29;9:253. doi: 10.1186/1471-2164-9-253.

PMID:
18510755
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36.

Rescue of pituitary function in a mouse model of isolated growth hormone deficiency type II by RNA interference.

Shariat N, Ryther RC, Phillips JA 3rd, Robinson IC, Patton JG.

Endocrinology. 2008 Feb;149(2):580-6. Epub 2007 Nov 15.

PMID:
18006625
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37.

Splicing fidelity, enhancers, and disease.

Solis AS, Shariat N, Patton JG.

Front Biosci. 2008 Jan 1;13:1926-42. Review.

PMID:
17981680

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38.

MiRNA expression analysis during normal zebrafish development and following inhibition of the Hedgehog and Notch signaling pathways.

Thatcher EJ, Flynt AS, Li N, Patton JR, Patton JG.

Dev Dyn. 2007 Aug;236(8):2172-80.

PMID:
17584857
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39.

Zebrafish miR-214 modulates Hedgehog signaling to specify muscle cell fate.

Flynt AS, Li N, Thatcher EJ, Solnica-Krezel L, Patton JG.

Nat Genet. 2007 Feb;39(2):259-63. Epub 2007 Jan 14.

PMID:
17220889
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40.

The splicing factor PSF is part of a large complex that assembles in the absence of pre-mRNA and contains all five snRNPs.

Peng R, Hawkins I, Link AJ, Patton JG.

RNA Biol. 2006 Apr;3(2):69-76. Epub 2006 Apr 9.

PMID:
17114945

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41.

Activation of alpha-tropomyosin exon 2 is regulated by the SR protein 9G8 and heterogeneous nuclear ribonucleoproteins H and F.

Crawford JB, Patton JG.

Mol Cell Biol. 2006 Dec;26(23):8791-802. Epub 2006 Sep 25.

PMID:
17000773
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42.

Dynamic sorting of nuclear components into distinct nucleolar caps during transcriptional inhibition.

Shav-Tal Y, Blechman J, Darzacq X, Montagna C, Dye BT, Patton JG, Singer RH, Zipori D.

Mol Biol Cell. 2005 May;16(5):2395-413. Epub 2005 Mar 9.

PMID:
15758027
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43.

siRNA therapeutics: big potential from small RNAs.

Ryther RC, Flynt AS, Phillips JA 3rd, Patton JG.

Gene Ther. 2005 Jan;12(1):5-11. Review.

PMID:
15496962

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44.

GH1 splicing is regulated by multiple enhancers whose mutation produces a dominant-negative GH isoform that can be degraded by allele-specific small interfering RNA (siRNA).

Ryther RC, Flynt AS, Harris BD, Phillips JA 3rd, Patton JG.

Endocrinology. 2004 Jun;145(6):2988-96. Epub 2004 Feb 26.

PMID:
14988388

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45.

Regulation of alternative splicing by SRrp86 and its interacting proteins.

Li J, Hawkins IC, Harvey CD, Jennings JL, Link AJ, Patton JG.

Mol Cell Biol. 2003 Nov;23(21):7437-47.

PMID:
14559993
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46.

Take a chance on nursing mentorships. Enhance leadership with this win-win strategy.

Owens JK, Patton JG.

Nurs Educ Perspect. 2003 Jul-Aug;24(4):198-204. Review.

PMID:
14528867

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47.

Disruption of exon definition produces a dominant-negative growth hormone isoform that causes somatotroph death and IGHD II.

Ryther RC, McGuinness LM, Phillips JA 3rd, Moseley CT, Magoulas CB, Robinson IC, Patton JG.

Hum Genet. 2003 Jul;113(2):140-8. Epub 2003 Apr 29.

PMID:
12720086

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48.

PSF and p54nrb bind a conserved stem in U5 snRNA.

Peng R, Dye BT, Pérez I, Barnard DC, Thompson AB, Patton JG.

RNA. 2002 Oct;8(10):1334-47.

PMID:
12403470
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49.

A unique glutamic acid-lysine (EK) domain acts as a splicing inhibitor.

Li J, Barnard DC, Patton JG.

J Biol Chem. 2002 Oct 18;277(42):39485-92. Epub 2002 Aug 14.

PMID:
12183448
Free Article

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50.

Regulation of alternative splicing by SRrp86 through coactivation and repression of specific SR proteins.

Barnard DC, Li J, Peng R, Patton JG.

RNA. 2002 Apr;8(4):526-33.

PMID:
11991645
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