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Items: 16

1.

The Personal Genome Project Canada: findings from whole genome sequences of the inaugural 56 participants.

Reuter MS, Walker S, Thiruvahindrapuram B, Whitney J, Cohn I, Sondheimer N, Yuen RKC, Trost B, Paton TA, Pereira SL, Herbrick JA, Wintle RF, Merico D, Howe J, MacDonald JR, Lu C, Nalpathamkalam T, Sung WWL, Wang Z, Patel RV, Pellecchia G, Wei J, Strug LJ, Bell S, Kellam B, Mahtani MM, Bassett AS, Bombard Y, Weksberg R, Shuman C, Cohn RD, Stavropoulos DJ, Bowdin S, Hildebrandt MR, Wei W, Romm A, Pasceri P, Ellis J, Ray P, Meyn MS, Monfared N, Hosseini SM, Joseph-George AM, Keeley FW, Cook RA, Fiume M, Lee HC, Marshall CR, Davies J, Hazell A, Buchanan JA, Szego MJ, Scherer SW.

CMAJ. 2018 Feb 5;190(5):E126-E136. doi: 10.1503/cmaj.171151.

2.

Genome sequencing as a platform for pharmacogenetic genotyping: a pediatric cohort study.

Cohn I, Paton TA, Marshall CR, Basran R, Stavropoulos DJ, Ray PN, Monfared N, Hayeems RZ, Meyn MS, Bowdin S, Scherer SW, Cohn RD, Ito S.

NPJ Genom Med. 2017 May 26;2:19. doi: 10.1038/s41525-017-0021-8. eCollection 2017.

3.

Oxytocin Receptor Polymorphisms are Differentially Associated with Social Abilities across Neurodevelopmental Disorders.

Baribeau DA, Dupuis A, Paton TA, Scherer SW, Schachar RJ, Arnold PD, Szatmari P, Nicolson R, Georgiades S, Crosbie J, Brian J, Iaboni A, Lerch J, Anagnostou E.

Sci Rep. 2017 Sep 14;7(1):11618. doi: 10.1038/s41598-017-10821-0.

4.

Novel 25 kb Deletion of MERTK Causes Retinitis Pigmentosa With Severe Progression.

Evans DR, Green JS, Johnson GJ, Schwartzentruber J, Majewski J, Beaulieu CL, Qin W, Marshall CR, Paton TA, Roslin NM, Paterson AD, Fahiminiya S, French J, Boycott KM, Woods MO; FORGE Canada Consortium.

Invest Ophthalmol Vis Sci. 2017 Mar 1;58(3):1736-1742. doi: 10.1167/iovs.16-20864.

PMID:
28324114
5.

De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis).

Lok S, Paton TA, Wang Z, Kaur G, Walker S, Yuen RK, Sung WW, Whitney J, Buchanan JA, Trost B, Singh N, Apresto B, Chen N, Coole M, Dawson TJ, Ho K, Hu Z, Pullenayegum S, Samler K, Shipstone A, Tsoi F, Wang T, Pereira SL, Rostami P, Ryan CA, Tong AH, Ng K, Sundaravadanam Y, Simpson JT, Lim BK, Engstrom MD, Dutton CJ, Kerr KC, Franke M, Rapley W, Wintle RF, Scherer SW.

G3 (Bethesda). 2017 Feb 9;7(2):755-773. doi: 10.1534/g3.116.038208.

6.

The genetic diversity of Epstein-Barr virus in the setting of transplantation relative to non-transplant settings: A feasibility study.

Allen UD, Hu P, Pereira SL, Robinson JL, Paton TA, Beyene J, Khodai-Booran N, Dipchand A, Hébert D, Ng V, Nalpathamkalam T, Read S.

Pediatr Transplant. 2016 Feb;20(1):124-9. doi: 10.1111/petr.12610. Epub 2015 Nov 18.

PMID:
26578436
7.

GRIN1 polymorphisms do not affect susceptibility or phenotype in NMDA receptor encephalitis.

Day GS, Prüss H, Benseler SM, Paton TA, Paterson AD, Andrade DM.

Neurol Neuroimmunol Neuroinflamm. 2015 Sep 24;2(5):e153. doi: 10.1212/NXI.0000000000000153. eCollection 2015 Oct.

8.

Whole-Exome Sequencing and Targeted Copy Number Analysis in Primary Ciliary Dyskinesia.

Marshall CR, Scherer SW, Zariwala MA, Lau L, Paton TA, Stockley T, Jobling RK, Ray PN, Knowles MR; FORGE Canada Consortium, Hall DA, Dell SD, Kim RH.

G3 (Bethesda). 2015 Jul 2;5(8):1775-81. doi: 10.1534/g3.115.019851.

9.

Long read nanopore sequencing for detection of HLA and CYP2D6 variants and haplotypes.

Ammar R, Paton TA, Torti D, Shlien A, Bader GD.

Version 2. F1000Res. 2015 Jan 21 [revised 2015 Jan 1];4:17. doi: 10.12688/f1000research.6037.2. eCollection 2015.

10.

Discrimination of SNPs in GC-rich regions using a modified hydrolysis probe chemistry protocol.

Mowjoodi A, Paton TA, Scherer SW.

Biotechniques. 2014 Dec 1;57(6):313-6. doi: 10.2144/000114240. eCollection 2014 Dec.

11.

OTX2 mutations cause autosomal dominant pattern dystrophy of the retinal pigment epithelium.

Vincent A, Forster N, Maynes JT, Paton TA, Billingsley G, Roslin NM, Ali A, Sutherland J, Wright T, Westall CA, Paterson AD, Marshall CR; FORGE Canada Consortium, Héon E.

J Med Genet. 2014 Dec;51(12):797-805. doi: 10.1136/jmedgenet-2014-102620. Epub 2014 Oct 7.

PMID:
25293953
12.

Genome-wide investigation of DNA methylation marks associated with FV Leiden mutation.

Aïssi D, Dennis J, Ladouceur M, Truong V, Zwingerman N, Rocanin-Arjo A, Germain M, Paton TA, Morange PE, Gagnon F, Trégouët DA.

PLoS One. 2014 Sep 29;9(9):e108087. doi: 10.1371/journal.pone.0108087. eCollection 2014.

13.

Reprever: resolving low-copy duplicated sequences using template driven assembly.

Kim S, Medvedev P, Paton TA, Bafna V.

Nucleic Acids Res. 2013 Jul;41(12):e128. doi: 10.1093/nar/gkt339. Epub 2013 May 8.

14.

Phylogenetic relationships and divergence times of Charadriiformes genera: multigene evidence for the Cretaceous origin of at least 14 clades of shorebirds.

Baker AJ, Pereira SL, Paton TA.

Biol Lett. 2007 Apr 22;3(2):205-9. Erratum in: Biol Lett. 2008 Dec 23;4(6):762-3.

15.
16.

RAG-1 sequences resolve phylogenetic relationships within Charadriiform birds.

Paton TA, Baker AJ, Groth JG, Barrowclough GF.

Mol Phylogenet Evol. 2003 Nov;29(2):268-78.

PMID:
13678682

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