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Assessing peptide binding to MHC II: An accurate semi-empirical quantum mechanics-based proposal.

Ortiz-Mahecha CA, Bohórquez HJ, Agudelo WA, Patarroyo MA, Patarroyo ME, Suárez CF.

J Chem Inf Model. 2019 Nov 20. doi: 10.1021/acs.jcim.9b00672. [Epub ahead of print]


Peptides Derived of Kunitz-Type Serine Protease Inhibitor as Potential Vaccine Against Experimental Schistosomiasis.

Hernández-Goenaga J, López-Abán J, Protasio AV, Vicente Santiago B, Del Olmo E, Vanegas M, Fernández-Soto P, Patarroyo MA, Muro A.

Front Immunol. 2019 Nov 1;10:2498. doi: 10.3389/fimmu.2019.02498. eCollection 2019.


NHP-immunome: A translational research-oriented database of non-human primate immune system proteins.

Plaza DF, Gómez MF, Patarroyo MA.

Cell Immunol. 2019 Oct 31:103999. doi: 10.1016/j.cellimm.2019.103999. [Epub ahead of print]


Maternal alloimmune IgG causes anti-glomerular basement membrane disease in perinatal transgenic mice that express human laminin α5.

Abrahamson DR, Steenhard BM, Stroganova L, Zelenchuk A, St John PL, Petroff MG, Patarroyo M, Borza DB.

Kidney Int. 2019 Jul 10. pii: S0085-2538(19)30701-X. doi: 10.1016/j.kint.2019.06.014. [Epub ahead of print]


Using next-generation sequencing for characterising HLA-DRB1 and DQB1 loci in a cohort of Colombian women.

Del Río-Ospina L, Camargo M, Soto-De León SC, Robayo-Calderón KL, Garzón-Ospina D, Patarroyo ME, Patarroyo MA.

HLA. 2019 Nov;94(5):425-434. doi: 10.1111/tan.13672. Epub 2019 Aug 29.


Designing and optimizing new antimicrobial peptides: all targets are not the same.

Barreto-Santamaría A, Patarroyo ME, Curtidor H.

Crit Rev Clin Lab Sci. 2019 Sep;56(6):351-373. doi: 10.1080/10408363.2019.1631249. Epub 2019 Aug 9.


Integrated genomic epidemiology and phenotypic profiling of Clostridium difficile across intra-hospital and community populations in Colombia.

Muñoz M, Restrepo-Montoya D, Kumar N, Iraola G, Camargo M, Díaz-Arévalo D, Roa-Molina NS, Tellez MA, Herrera G, Ríos-Chaparro DI, Birchenall C, Pinilla D, Pardo-Oviedo JM, Rodríguez-Leguizamón G, Josa DF, Lawley TD, Patarroyo MA, Ramírez JD.

Sci Rep. 2019 Aug 5;9(1):11293. doi: 10.1038/s41598-019-47688-2.


Comparative genomics identifies potential virulence factors in Clostridium tertium and C. paraputrificum.

Muñoz M, Restrepo-Montoya D, Kumar N, Iraola G, Herrera G, Ríos-Chaparro DI, Díaz-Arévalo D, Patarroyo MA, Lawley TD, Ramírez JD.

Virulence. 2019 Dec;10(1):657-676. doi: 10.1080/21505594.2019.1637699.


Complement Receptor 1 availability on red blood cell surface modulates Plasmodium vivax invasion of human reticulocytes.

Prajapati SK, Borlon C, Rovira-Vallbona E, Gruszczyk J, Menant S, Tham WH, Kattenberg JH, Villasis E, De Meulenaere K, Gamboa D, Vinetz J, Fujita R, Xuan XN, Urbano Ferreira M, Niño CH, Patarroyo MA, Spanakos G, Kestens L, Abbeele JVD, Rosanas-Urgell A.

Sci Rep. 2019 Jun 20;9(1):8943. doi: 10.1038/s41598-019-45228-6.


High frequency of toxigenic Clostridium difficile and Clostridium perfringens coinfection among diarrheic patients at health care facility-onset (HCFO) and community-onset (CO) centers in Bogotá, Colombia.

Forero AJ, Muñoz M, Camargo M, Soto-De León SC, Ríos-Chaparro DI, Birchenall C, Pinilla D, Pardo JM, Josa DF, Patarroyo MA, Ramírez JD.

Gut Pathog. 2019 Jun 3;11:27. doi: 10.1186/s13099-019-0308-7. eCollection 2019.


Sarconesin II, a New Antimicrobial Peptide Isolated from Sarconesiopsis magellanica Excretions and Secretions.

Díaz-Roa A, Espinoza-Culupú A, Torres-García O, Borges MM, Avino IN, Alves FL, Miranda A, Patarroyo MA, da Silva PI Jr, Bello FJ.

Molecules. 2019 May 31;24(11). pii: E2077. doi: 10.3390/molecules24112077.


Specific Binding Peptides from Rv3632: A Strategy for Blocking Mycobacterium tuberculosis Entry to Target Cells?

Sánchez-Barinas CD, Ocampo M, Tabares L, Bermúdez M, Patarroyo MA, Patarroyo ME.

Biomed Res Int. 2019 Apr 14;2019:8680935. doi: 10.1155/2019/8680935. eCollection 2019.


Immunocompetent patient with a brain abscess caused by Nocardia beijingensis in Latin America: A case report.

Solano-Varela DM, Barrios-Vidales EM, Plaza DF, Riveros WM, Guzmán J, Chica CE, Patarroyo MA.

Medicine (Baltimore). 2019 Mar;98(11):e14879. doi: 10.1097/MD.0000000000014879.


An epidemiological and molecular study regarding the spread of vancomycin-resistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016.

Corredor NC, López C, Aguilera PA, Prieto LM, Rodríguez-Leguizamón G, Leal AL, Ovalle-Guerro MV, Pardo-Oviedo JM, Chica CE, Patarroyo MA.

BMC Infect Dis. 2019 Mar 15;19(1):258. doi: 10.1186/s12879-019-3877-7.


Behavior and abundance of Anopheles darlingi in communities living in the Colombian Amazon riverside.

Prado CC, Alvarado-Cabrera LA, Camargo-Ayala PA, Garzón-Ospina D, Camargo M, Soto-De León SC, Cubides JR, Celis-Giraldo CT, Patarroyo ME, Patarroyo MA.

PLoS One. 2019 Mar 7;14(3):e0213335. doi: 10.1371/journal.pone.0213335. eCollection 2019.


Experimental models used in evaluating anti-tuberculosis vaccines: the latest advances in the field.

Mantilla Galindo A, Ocampo M, Patarroyo MA.

Expert Rev Vaccines. 2019 Apr;18(4):365-377. doi: 10.1080/14760584.2019.1583558. Epub 2019 Feb 27.


Parasite-Related Genetic and Epigenetic Aspects and Host Factors Influencing Plasmodium falciparum Invasion of Erythrocytes.

Ararat-Sarria M, Patarroyo MA, Curtidor H.

Front Cell Infect Microbiol. 2019 Jan 14;8:454. doi: 10.3389/fcimb.2018.00454. eCollection 2018. Review.


Synthetic Evaluation of Standard and Microwave-Assisted Solid Phase Peptide Synthesis of a Long Chimeric Peptide Derived from Four Plasmodium falciparum Proteins.

Varela YF, Vanegas Murcia M, Patarroyo ME.

Molecules. 2018 Nov 5;23(11). pii: E2877. doi: 10.3390/molecules23112877.


Sarconesin: Sarconesiopsis magellanica Blowfly Larval Excretions and Secretions With Antibacterial Properties.

Díaz-Roa A, Patarroyo MA, Bello FJ, Da Silva PI Jr.

Front Microbiol. 2018 Sep 28;9:2249. doi: 10.3389/fmicb.2018.02249. eCollection 2018.


Cryptosporidium spp. CP15 and CSL protein-derived synthetic peptides' immunogenicity and in vitro seroneutralisation capability.

Avendaño C, Jenkins M, Méndez-Callejas G, Oviedo J, Guzmán F, Patarroyo MA, Sánchez-Acedo C, Quílez J.

Vaccine. 2018 Oct 29;36(45):6703-6710. doi: 10.1016/j.vaccine.2018.09.044. Epub 2018 Sep 26.


On the Evolution and Function of Plasmodium vivax Reticulocyte Binding Surface Antigen (pvrbsa).

Camargo-Ayala PA, Garzón-Ospina D, Moreno-Pérez DA, Ricaurte-Contreras LA, Noya O, Patarroyo MA.

Front Genet. 2018 Sep 10;9:372. doi: 10.3389/fgene.2018.00372. eCollection 2018.


Plasmodium vivax Pv12 B-cell epitopes and HLA-DRβ1*-dependent T-cell epitopes in vitro antigenicity.

Yepes-Pérez Y, López C, Suárez CF, Patarroyo MA.

PLoS One. 2018 Sep 10;13(9):e0203715. doi: 10.1371/journal.pone.0203715. eCollection 2018.


Correction to: Comparison of healing of full-thickness skin wounds grafted with multidirectional or unidirectional autologous artificial dermis: differential delivery of healing biomarkers.

Fontanilla MR, Casadiegos S, Bustos RH, Patarroyo MA.

Drug Deliv Transl Res. 2019 Feb;9(1):414. doi: 10.1007/s13346-018-0581-x.


Unveiling the Multilocus Sequence Typing (MLST) Schemes and Core Genome Phylogenies for Genotyping Chlamydia trachomatis.

Patiño LH, Camargo M, Muñoz M, Ríos-Chaparro DI, Patarroyo MA, Ramírez JD.

Front Microbiol. 2018 Aug 22;9:1854. doi: 10.3389/fmicb.2018.01854. eCollection 2018.


Association of HIV status with infection by multiple HPV types.

Camargo M, Del Río-Ospina L, Soto-De León SC, Sánchez R, Pineda-Peña AC, Sussmann O, Patarroyo ME, Patarroyo MA.

Trop Med Int Health. 2018 Nov;23(11):1259-1268. doi: 10.1111/tmi.13142. Epub 2018 Sep 10.


Plasmodium vivax in vitro continuous culture: the spoke in the wheel.

Bermúdez M, Moreno-Pérez DA, Arévalo-Pinzón G, Curtidor H, Patarroyo MA.

Malar J. 2018 Aug 20;17(1):301. doi: 10.1186/s12936-018-2456-5. Review.


Self-assembling functional programmable protein array for studying protein-protein interactions in malaria parasites.

Arévalo-Pinzón G, González-González M, Suárez CF, Curtidor H, Carabias-Sánchez J, Muro A, LaBaer J, Patarroyo MA, Fuentes M.

Malar J. 2018 Jul 17;17(1):270. doi: 10.1186/s12936-018-2414-2.


In silico and in vitro analysis of boAP3d1 protein interaction with bovine leukaemia virus gp51.

Corredor AP, González J, Baquero LA, Curtidor H, Olaya-Galán NN, Patarroyo MA, Gutiérrez MF.

PLoS One. 2018 Jun 21;13(6):e0199397. doi: 10.1371/journal.pone.0199397. eCollection 2018.


HAX-1 overexpression in multiple myeloma is associated with poor survival.

Feng X, Kwiecinska A, Rossmann E, Bottai M, Ishikawa T, Patarroyo M, Österborg A, Porwit A, Zheng C, Fadeel B.

Br J Haematol. 2019 Apr;185(1):179-183. doi: 10.1111/bjh.15430. Epub 2018 Jun 19. No abstract available.


The in Vitro Antigenicity of Plasmodium vivax Rhoptry Neck Protein 2 (PvRON2) B- and T-Epitopes Selected by HLA-DRB1 Binding Profile.

López C, Yepes-Pérez Y, Díaz-Arévalo D, Patarroyo ME, Patarroyo MA.

Front Cell Infect Microbiol. 2018 May 15;8:156. doi: 10.3389/fcimb.2018.00156. eCollection 2018.


Comparison of healing of full-thickness skin wounds grafted with multidirectional or unidirectional autologous artificial dermis: differential delivery of healing biomarkers.

Fontanilla MR, Casadiegos S, Bustos RH, Patarroyo MA.

Drug Deliv Transl Res. 2018 Oct;8(5):1014-1024. doi: 10.1007/s13346-018-0528-2. Erratum in: Drug Deliv Transl Res. 2018 Sep 5;:.


Specific β-Turns Precede PPIIL Structures Binding to Allele-Specific HLA-DRβ1* PBRs in Fully-Protective Malaria Vaccine Components.

Bermudez A, Alba MP, Vanegas M, Patarroyo MA, Patarroyo ME.

Front Chem. 2018 Apr 6;6:106. doi: 10.3389/fchem.2018.00106. eCollection 2018.


Towards designing a synthetic antituberculosis vaccine: The Rv3587c peptide inhibits mycobacterial entry to host cells.

Carabali-Isajar ML, Ocampo M, Rodriguez DC, Vanegas M, Curtidor H, Patarroyo MA, Patarroyo ME.

Bioorg Med Chem. 2018 May 15;26(9):2401-2409. doi: 10.1016/j.bmc.2018.03.044. Epub 2018 Apr 4.


Micro-epidemiology of mixed-species malaria infections in a rural population living in the Colombian Amazon region.

Camargo M, Soto-De León SC, Del Río-Ospina L, Páez AC, González Z, González E, Cubides JR, Camargo-Ayala PA, Patarroyo ME, Patarroyo MA.

Sci Rep. 2018 Apr 3;8(1):5543. doi: 10.1038/s41598-018-23801-9.


Culturing functional pancreatic islets on α5-laminins and curative transplantation to diabetic mice.

Sigmundsson K, Ojala JRM, Öhman MK, Österholm AM, Moreno-Moral A, Domogatskaya A, Chong LY, Sun Y, Chai X, Steele JAM, George B, Patarroyo M, Nilsson AS, Rodin S, Ghosh S, Stevens MM, Petretto E, Tryggvason K.

Matrix Biol. 2018 Sep;70:5-19. doi: 10.1016/j.matbio.2018.03.018. Epub 2018 Mar 27.


Simultaneous detection of Plasmodium vivax dhfr, dhps, mdr1 and crt-o resistance-associated mutations in the Colombian Amazonian region.

Cubides JR, Camargo-Ayala PA, Niño CH, Garzón-Ospina D, Ortega-Ortegón A, Ospina-Cantillo E, Orduz-Durán MF, Patarroyo ME, Patarroyo MA.

Malar J. 2018 Mar 27;17(1):130. doi: 10.1186/s12936-018-2286-5.


Publisher Correction: Mass & secondary structure propensity of amino acids explain their mutability and evolutionary replacements.

Bohórquez HJ, Suárez CF, Patarroyo ME.

Sci Rep. 2018 Mar 6;8(1):4273. doi: 10.1038/s41598-018-21981-y.


Mycobacterium tuberculosis H37Rv LpqG Protein Peptides Can Inhibit Mycobacterial Entry through Specific Interactions.

Sánchez-Barinas CD, Ocampo M, Vanegas M, Castañeda-Ramirez JJ, Patarroyo MA, Patarroyo ME.

Molecules. 2018 Feb 27;23(3). pii: E526. doi: 10.3390/molecules23030526.


Receptor-ligand and parasite protein-protein interactions in Plasmodium vivax: Analysing rhoptry neck proteins 2 and 4.

Bermúdez M, Arévalo-Pinzón G, Rubio L, Chaloin O, Muller S, Curtidor H, Patarroyo MA.

Cell Microbiol. 2018 Jul;20(7):e12835. doi: 10.1111/cmi.12835. Epub 2018 Mar 26.


Quantifying intracellular Mycobacterium tuberculosis: An essential issue for in vitro assays.

Rodriguez DC, Ocampo M, Salazar LM, Patarroyo MA.

Microbiologyopen. 2018 Apr;7(2):e00588. doi: 10.1002/mbo3.588. Epub 2018 Feb 27. Review.


New Insights into Clostridium difficile (CD) Infection in Latin America: Novel Description of Toxigenic Profiles of Diarrhea-Associated to CD in Bogotá, Colombia.

Muñoz M, Ríos-Chaparro DI, Herrera G, Soto-De Leon SC, Birchenall C, Pinilla D, Pardo-Oviedo JM, Josa DF, Patarroyo MA, Ramírez JD.

Front Microbiol. 2018 Jan 30;9:74. doi: 10.3389/fmicb.2018.00074. eCollection 2018.


Identifying Potential Plasmodium vivax Sporozoite Stage Vaccine Candidates: An Analysis of Genetic Diversity and Natural Selection.

Garzón-Ospina D, Buitrago SP, Ramos AE, Patarroyo MA.

Front Genet. 2018 Jan 25;9:10. doi: 10.3389/fgene.2018.00010. eCollection 2018.


Easy and fast method for expression and native extraction of Plasmodium vivax Duffy binding protein fragments.

Moreno-Pérez DA, Baquero LA, Bermúdez M, Gómez-Muñoz LA, Varela Y, Patarroyo MA.

Malar J. 2018 Feb 8;17(1):76. doi: 10.1186/s12936-018-2216-6.


Conserved Binding Regions Provide the Clue for Peptide-Based Vaccine Development: A Chemical Perspective.

Curtidor H, Reyes C, Bermúdez A, Vanegas M, Varela Y, Patarroyo ME.

Molecules. 2017 Dec 12;22(12). pii: E2199. doi: 10.3390/molecules22122199. Review.


A novel loop-mediated isothermal amplification-based test for detecting Neospora caninum DNA.

Ramos AE, Muñoz M, Cortés-Vecino JA, Barato P, Patarroyo MA.

Parasit Vectors. 2017 Nov 29;10(1):590. doi: 10.1186/s13071-017-2549-y.


Community-acquired infection with hypervirulent Clostridium difficile isolates that carry different toxin and antibiotic resistance loci: a case report.

Muñoz M, Camargo M, Ríos-Chaparro DI, Gómez P, Patarroyo MA, Ramírez JD.

Gut Pathog. 2017 Nov 9;9:63. doi: 10.1186/s13099-017-0212-y. eCollection 2017.


A Large Size Chimeric Highly Immunogenic Peptide Presents Multistage Plasmodium Antigens as a Vaccine Candidate System against Malaria.

Lozano JM, Varela Y, Silva Y, Ardila K, Forero M, Guasca L, Guerrero Y, Bermudez A, Alba P, Vanegas M, Patarroyo ME.

Molecules. 2017 Nov 1;22(11). pii: E1837. doi: 10.3390/molecules22111837.


Novel genes and mutations in patients affected by recurrent pregnancy loss.

Quintero-Ronderos P, Mercier E, Fukuda M, González R, Suárez CF, Patarroyo MA, Vaiman D, Gris JC, Laissue P.

PLoS One. 2017 Oct 10;12(10):e0186149. doi: 10.1371/journal.pone.0186149. eCollection 2017.


Evaluating the anti-leishmania activity of Lucilia sericata and Sarconesiopsis magellanica blowfly larval excretions/secretions in an in vitro model.

Laverde-Paz MJ, Echeverry MC, Patarroyo MA, Bello FJ.

Acta Trop. 2018 Jan;177:44-50. doi: 10.1016/j.actatropica.2017.09.033. Epub 2017 Oct 2.


Bovine leukaemia virus DNA in fresh milk and raw beef for human consumption.

Olaya-Galán NN, Corredor-Figueroa AP, Guzmán-Garzón TC, Ríos-Hernandez KS, Salas-Cárdenas SP, Patarroyo MA, Gutierrez MF.

Epidemiol Infect. 2017 Nov;145(15):3125-3130. doi: 10.1017/S0950268817002229. Epub 2017 Sep 28.


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