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Environmental and epigenetic regulation of Rider retrotransposons in tomato.

Benoit M, Drost HG, Catoni M, Gouil Q, Lopez-Gomollon S, Baulcombe D, Paszkowski J.

PLoS Genet. 2019 Sep 16;15(9):e1008370. doi: 10.1371/journal.pgen.1008370. eCollection 2019 Sep.


Efficacy of combined prophylactic therapy (rifaximine alpha + prebiotic arabinogalactan with lactofferin) on GUT function in patients with diagnosed symptomatic uncomplicated diverticular disease.

Banasiewicz T, Paszkowski J, Borejsza-Wysocki M, Bobkiewicz A, Pietrzak A, Szczepkowski M, Francuzik W.

Pol Przegl Chir. 2019 Aug 31;91(4):1-8. doi: 10.5604/01.3001.0013.4115.


Lactose intolerance, lactose malabsorption and genetic predisposition to adult-type hypolactasia in patients after restorative proctocolectomy.

Walkowiak J, Fidler-Witoń E, Glapa A, Paszkowski J, Borejsza-Wysocki M, Miśkiewicz-Chotnicka A, Banasiewicz T, Lisowska A.

Acta Biochim Pol. 2019 May 28;66(2):173-175. doi: 10.18388/abp.2018_2730.


Virus-mediated export of chromosomal DNA in plants.

Catoni M, Noris E, Vaira AM, Jonesman T, Matić S, Soleimani R, Behjatnia SAA, Vinals N, Paszkowski J, Accotto GP.

Nat Commun. 2018 Dec 13;9(1):5308. doi: 10.1038/s41467-018-07775-w.


Sensitive detection of pre-integration intermediates of long terminal repeat retrotransposons in crop plants.

Cho J, Benoit M, Catoni M, Drost HG, Brestovitsky A, Oosterbeek M, Paszkowski J.

Nat Plants. 2019 Jan;5(1):26-33. doi: 10.1038/s41477-018-0320-9. Epub 2018 Dec 10.


Mobilization of Pack-CACTA transposons in Arabidopsis suggests the mechanism of gene shuffling.

Catoni M, Jonesman T, Cerruti E, Paszkowski J.

Nucleic Acids Res. 2019 Feb 20;47(3):1311-1320. doi: 10.1093/nar/gky1196.


Vitamin K Deficiency in Patients After Restorative Proctocolectomy.

Glapa A, Waraczewski K, Nowak JK, Paszkowski J, Borejsza-Wysocki M, Krzyżanowska-Jankowska P, Banasiewicz T, Walkowiak J.

Inflamm Bowel Dis. 2019 Feb 21;25(3):e17-e18. doi: 10.1093/ibd/izy184. No abstract available.


Sequence-Independent Identification of Active LTR Retrotransposons in Arabidopsis.

Griffiths J, Catoni M, Iwasaki M, Paszkowski J.

Mol Plant. 2018 Mar 5;11(3):508-511. doi: 10.1016/j.molp.2017.10.012. Epub 2017 Oct 26. No abstract available.


High-frequency recombination between members of an LTR retrotransposon family during transposition bursts.

Sanchez DH, Gaubert H, Drost HG, Zabet NR, Paszkowski J.

Nat Commun. 2017 Nov 3;8(1):1283. doi: 10.1038/s41467-017-01374-x.


Regulation of rice root development by a retrotransposon acting as a microRNA sponge.

Cho J, Paszkowski J.

Elife. 2017 Aug 26;6. pii: e30038. doi: 10.7554/eLife.30038.


Developmental Restriction of Retrotransposition Activated in Arabidopsis by Environmental Stress.

Gaubert H, Sanchez DH, Drost HG, Paszkowski J.

Genetics. 2017 Oct;207(2):813-821. doi: 10.1534/genetics.117.300103. Epub 2017 Aug 3.


The influence of rifaximin on diverticulitis rate and quality of life in patients with diverticulosis.

Banasiewicz T, Francuzik W, Bobkiewicz A, Krokowicz Ł, Borejsza-Wysocki M, Paszkowski J, Studniarek A, Krokowicz P, Grochowalski M, Szczepkowski M, Lorenc Z.

Pol Przegl Chir. 2017 Feb 28;89(1):22-31. doi: 10.5604/01.3001.0009.6012.


Biomartr: genomic data retrieval with R.

Drost HG, Paszkowski J.

Bioinformatics. 2017 Apr 15;33(8):1216-1217. doi: 10.1093/bioinformatics/btw821.


DNA sequence properties that predict susceptibility to epiallelic switching.

Catoni M, Griffiths J, Becker C, Zabet NR, Bayon C, Dapp M, Lieberman-Lazarovich M, Weigel D, Paszkowski J.

EMBO J. 2017 Mar 1;36(5):617-628. doi: 10.15252/embj.201695602. Epub 2017 Jan 9.


Cytosine methylation at CpCpG sites triggers accumulation of non-CpG methylation in gene bodies.

Zabet NR, Catoni M, Prischi F, Paszkowski J.

Nucleic Acids Res. 2017 Apr 20;45(7):3777-3784. doi: 10.1093/nar/gkw1330.


A Prospective, Descriptive Study to Assess the Effect of Dietary and Pharmacological Strategies to Manage Constipation in Patients with a Stoma.

Krokowicz L, Bobkiewicz A, Borejsza-Wysocki M, Kuczynska B, Lisowska A, Skowronska-Piekarska U, Paszkowski J, Walkowiak J, Drews M, Banasiewicz T.

Ostomy Wound Manage. 2015 Dec;61(12):14-22.


A giant non-functioning pancreatic neuroendocrine carcinoma founded as an incidentaloma successfully treated with pancreatoduodenectomy.

Paszkowski J, Bobkiewicz A, Świrkowicz J, Krokowicz Ł, Majewski J, Banasiewicz T, Drews M.

Prz Gastroenterol. 2016;11(3):211-213. Epub 2016 Aug 5. No abstract available.


Erratum to: Botulinum Toxin Injection for Treatment of Chronic Anal Fissure: Is There Any Dose-Dependent Efficiency? A Meta-Analysis.

Bobkiewicz A, Francuzik W, Krokowicz L, Studniarek A, Ledwosiński W, Paszkowski J, Drews M, Banasiewicz T.

World J Surg. 2016 Dec;40(12):3063. doi: 10.1007/s00268-016-3722-8. No abstract available.


Botulinum Toxin Injection for Treatment of Chronic Anal Fissure: Is There Any Dose-Dependent Efficiency? A Meta-Analysis.

Bobkiewicz A, Francuzik W, Krokowicz L, Studniarek A, Ledwosiński W, Paszkowski J, Drews M, Banasiewicz T.

World J Surg. 2016 Dec;40(12):3064-3072. doi: 10.1007/s00268-016-3693-9. Review. Erratum in: World J Surg. 2016 Dec;40(12 ):3063.


Epigenetics: The karma of oil palms.

Paszkowski J.

Nature. 2015 Sep 24;525(7570):466-7. doi: 10.1038/nature15216. Epub 2015 Sep 9. No abstract available.


Surgical methods of treatment of intestinal passage disturbances with the characteristics of constipation in patients with intestinal stoma based on own experience.

Krokowicz Ł, Sławek S, Ledwosiński W, Bobkiewicz A, Borejsza-Wysocki M, Kuczyńska B, Szmyt K, Paszkowski J, Drews M, Banasiewicz T.

Pol Przegl Chir. 2015 Apr;87(4):160-5. doi: 10.1515/pjs-2015-0038.


Large bowel mucosal neoplasia in the original specimen may increase the risk of ileal pouch neoplasia in patients following restorative proctocolectomy for ulcerative colitis.

Bobkiewicz A, Krokowicz L, Paszkowski J, Studniarek A, Szmyt K, Majewski J, Walkowiak J, Majewski P, Drews M, Banasiewicz T.

Int J Colorectal Dis. 2015 Sep;30(9):1261-6. doi: 10.1007/s00384-015-2271-1. Epub 2015 May 29.


Controlled activation of retrotransposition for plant breeding.

Paszkowski J.

Curr Opin Biotechnol. 2015 Apr;32:200-206. doi: 10.1016/j.copbio.2015.01.003. Epub 2015 Jan 20. Review.


Perineal wound healing after abdominoperineal resection for rectal cancer: a systematic review and meta-analysis.

Bobkiewicz A, Banasiewicz T, Krokowicz L, Paszkowski J, Hermann J, Malinger S, Drews M.

Dis Colon Rectum. 2015 Feb;58(2):e18. doi: 10.1097/DCR.0000000000000303. No abstract available.


Heterosis and inbreeding depression of epigenetic Arabidopsis hybrids.

Dapp M, Reinders J, Bédiée A, Balsera C, Bucher E, Theiler G, Granier C, Paszkowski J.

Nat Plants. 2015 Jul 6;1:15092. doi: 10.1038/nplants.2015.92.


Heat-induced release of epigenetic silencing reveals the concealed role of an imprinted plant gene.

Sanchez DH, Paszkowski J.

PLoS Genet. 2014 Nov 20;10(11):e1004806. doi: 10.1371/journal.pgen.1004806. eCollection 2014 Nov.


Epigenetic memory in plants.

Iwasaki M, Paszkowski J.

EMBO J. 2014 Sep 17;33(18):1987-98. doi: 10.15252/embj.201488883. Epub 2014 Aug 7. Review.


Identification of genes preventing transgenerational transmission of stress-induced epigenetic states.

Iwasaki M, Paszkowski J.

Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):8547-52. doi: 10.1073/pnas.1402275111. Epub 2014 May 27.


Digital image analysis of inflammation markers in colorectal mucosa by using a spatial visualization method.

Kaczmarek E, Banasiewicz T, Seraszek-Jaros A, Krokowicz P, Grochowalski M, Majewski P, Zurawski J, Paszkowski J, Drews M.

Pathol Res Pract. 2014 Mar;210(3):147-54. doi: 10.1016/j.prp.2013.11.007. Epub 2013 Nov 28.


Parent-of-origin control of transgenerational retrotransposon proliferation in Arabidopsis.

Reinders J, Mirouze M, Nicolet J, Paszkowski J.

EMBO Rep. 2013 Sep;14(9):823-8. doi: 10.1038/embor.2013.95. Epub 2013 Jul 9.


Development of a new, simple and cost-effective diagnostic tool for genetic screening of hereditary colorectal cancer--the DNA microarray assay.

Stojcev Z, Banasiewicz T, Kaszuba M, Sikorski A, Szczepkowski M, Bobkiewicz A, Paszkowski J, Krokowicz Ł, Biczysko M, Szmeja J, Jurkowska M, Majewski P, Mackiewicz A, Lamperska K, Drews M, Wojciechowicz J.

Acta Biochim Pol. 2013;60(2):195-8. Epub 2013 Jun 6.


Cell signaling and gene regulation.

Paszkowski J, Martienssen RA.

Curr Opin Plant Biol. 2012 Nov;15(5):493-5. doi: 10.1016/j.pbi.2012.10.002. Epub 2012 Nov 7. No abstract available.


Endoscopy-assisted minimally invasive loop ileostomy after previous restorative proctocolectomy.

Banasiewicz T, Paszkowski J, Bobkiewicz A, Drews M.

Dis Colon Rectum. 2012 Sep;55(9):1012-4. doi: 10.1097/DCR.0b013e31825fe3d4.


Loss of DNA methylation affects the recombination landscape in Arabidopsis.

Mirouze M, Lieberman-Lazarovich M, Aversano R, Bucher E, Nicolet J, Reinders J, Paszkowski J.

Proc Natl Acad Sci U S A. 2012 Apr 10;109(15):5880-5. doi: 10.1073/pnas.1120841109. Epub 2012 Mar 26.


Structural basis of transcriptional gene silencing mediated by Arabidopsis MOM1.

Nishimura T, Molinard G, Petty TJ, Broger L, Gabus C, Halazonetis TD, Thore S, Paszkowski J.

PLoS Genet. 2012 Feb;8(2):e1002484. doi: 10.1371/journal.pgen.1002484. Epub 2012 Feb 9.


Analysis of the efficacy of screening tests in colorectal cancer by faecal occult blood test--own experience.

Kozłowski T, Godlewski D, Biczysko M, Grochowalski M, Nelke M, Paszkowski J, Borejsza-Wysocki M, Krokowicz L, Krokowicz P, Banasiewicz T, Drews M.

Pol Przegl Chir. 2011 Aug;83(8):411-23. doi: 10.2478/v10035-011-0065-x.


Intestinal pouch complications in patients who underwent restorative proctocolectomy for ulcerative colitis and familial adenomatous polyposis in 1985-2008.

Burdyński R, Banasiewicz T, Marciniak R, Biczysko M, Szmeja J, Paszkowski J, Grochowalski M, Maik J, Majewski P, Krokowicz P, Drews M.

Pol Przegl Chir. 2011 Mar;83(3):161-70. doi: 10.2478/v10035-011-0025-5.


A case of late breast cancer metastases to both suprarenal glands 28 years after mastectomy.

Banasiewicz T, Krokowicz L, Biczysko M, Janicka-Jedyńska M, Pławski A, Paszkowski J, Gronek P, Stawny B, Drews M.

Clin Breast Cancer. 2012 Feb;12(1):68-70. doi: 10.1016/j.clbc.2011.08.006. Epub 2011 Oct 19. No abstract available.


Ectopic gene expression and organogenesis in Arabidopsis mutants missing BRU1 required for genome maintenance.

Ohno Y, Narangajavana J, Yamamoto A, Hattori T, Kagaya Y, Paszkowski J, Gruissem W, Hennig L, Takeda S.

Genetics. 2011 Sep;189(1):83-95. doi: 10.1534/genetics.111.130062. Epub 2011 Jul 29.


Pouchitis may increase the risk of dysplasia after restorative proctocolectomy in patients with ulcerative colitis.

Banasiewicz T, Marciniak R, Paszkowski J, Krokowicz P, Kaczmarek E, Walkowiak J, Szmeja J, Majewski P, Drews M.

Colorectal Dis. 2012 Jan;14(1):92-7. doi: 10.1111/j.1463-1318.2011.02547.x.


The prognosis of clinical course and the analysis of the frequency of the inflammation and dysplasia in the intestinal J-pouch at the patients after restorative proctocolectomy due to FAP.

Banasiewicz T, Marciniak R, Kaczmarek E, Krokowicz P, Paszkowski J, Lozynska-Nelke A, Gronek P, Plawski A, Drews M.

Int J Colorectal Dis. 2011 Sep;26(9):1197-203. doi: 10.1007/s00384-011-1241-5. Epub 2011 May 11.


Epigenetic contribution to stress adaptation in plants.

Mirouze M, Paszkowski J.

Curr Opin Plant Biol. 2011 Jun;14(3):267-74. doi: 10.1016/j.pbi.2011.03.004. Epub 2011 Mar 28. Review.


Diagnosis of a cecal tumour with virtual colonoscopy.

Hermann J, Karmelita-Katulska K, Paszkowski J, Drews M, Stajgis M.

Pol J Radiol. 2011 Apr;76(2):25-7.


An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress.

Ito H, Gaubert H, Bucher E, Mirouze M, Vaillant I, Paszkowski J.

Nature. 2011 Apr 7;472(7341):115-9. doi: 10.1038/nature09861. Epub 2011 Mar 13.


Selected aspects of transgenerational epigenetic inheritance and resetting in plants.

Paszkowski J, Grossniklaus U.

Curr Opin Plant Biol. 2011 Apr;14(2):195-203. doi: 10.1016/j.pbi.2011.01.002. Epub 2011 Feb 18. Review.


The diameter of the ileal J-pouch-anal anastomosis as an important risk factor of pouchitis - clinical observations.

Banasiewicz T, Marciniak R, Kaczmarek E, Meissner W, Krokowicz P, Paszkowski J, Walkowiak J, Majewski P, Marszałek A, Drews M.

Med Sci Monit. 2011 Feb;17(2):CR91-6.


Stress-induced activation of heterochromatic transcription.

Tittel-Elmer M, Bucher E, Broger L, Mathieu O, Paszkowski J, Vaillant I.

PLoS Genet. 2010 Oct 28;6(10):e1001175. doi: 10.1371/journal.pgen.1001175.


Expression, crystallization and preliminary X-ray diffraction analysis of the CMM2 region of the Arabidopsis thaliana Morpheus' molecule 1 protein.

Petty TJ, Nishimura T, Emamzadah S, Gabus C, Paszkowski J, Halazonetis TD, Thore S.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Aug 1;66(Pt 8):916-8. doi: 10.1107/S1744309110021068. Epub 2010 Jul 29.


Bisulfite methylation profiling of large genomes.

Reinders J, Paszkowski J.

Epigenomics. 2010 Apr;2(2):209-20. doi: 10.2217/epi.10.6. Review.


Unlocking the Arabidopsis epigenome.

Reinders J, Paszkowski J.

Epigenetics. 2009 Nov 16;4(8):557-63. Epub 2009 Nov 18. Review.


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