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[Clinical and morphological characteristics of thyroid tumors in children of the Chelyabinsk Region].

Kazachkov EL, Pasternak IA, Pasternak AE.

Arkh Patol. 2019;81(4):53-58. doi: 10.17116/patol20198104153. Russian.


Boerhaave's syndrome in an ultra-distance runner.

Pasternak A, Ellero J, Maxwell S, Cheung V.

BMJ Case Rep. 2019 Aug 8;12(8). pii: e230343. doi: 10.1136/bcr-2019-230343.


Nusinersen improves walking distance and reduces fatigue in later-onset spinal muscular atrophy.

Montes J, Dunaway Young S, Mazzone ES, Pasternak A, Glanzman AM, Finkel RS, Darras BT, Muntoni F, Mercuri E, De Vivo DC, Bishop KM, Schneider E, Bennett CF, Foster R, Farwell W; CS2 and CS12 Study Groups.

Muscle Nerve. 2019 Oct;60(4):409-414. doi: 10.1002/mus.26633. Epub 2019 Jul 27.


On the generation of the MSD-Ѱ class of defective HIV proviruses.

Das AT, Pasternak AO, Berkhout B.

Retrovirology. 2019 Jul 11;16(1):19. doi: 10.1186/s12977-019-0481-2.


Potential for a localized immune response by the ruminal epithelium in nonpregnant heifers following a short-term subacute ruminal acidosis challenge.

Kent-Dennis C, Pasternak A, Plaizier JC, Penner GB.

J Dairy Sci. 2019 Aug;102(8):7556-7569. doi: 10.3168/jds.2019-16294. Epub 2019 Jun 20.


Efficacy of daratumumab monotherapy in real-world heavily pretreated patients with relapsed or refractory multiple myeloma.

Salomon-Perzyński A, Walter-Croneck A, Usnarska-Zubkiewicz L, Dytfeld D, Zielińska P, Wojciechowska M, Hołojda J, Robak P, Pasternak A, Knopińska-Posłuszny W, Hawrylecka D, Wójtowicz M, Szeremet A, Osowiecki M, Mordak-Domagała M, Zaucha JM, Giannopoulos K, Warzocha K, Jamroziak K.

Adv Med Sci. 2019 May 21;64(2):349-355. doi: 10.1016/j.advms.2019.05.001. [Epub ahead of print]


Impact of CYP3A5 phenotype on tacrolimus concentrations after sublingual and oral administration in lung transplant.

Pasternak AL, Kidwell KM, Dempsey JM, Gersch CL, Pesch A, Sun Y, Rae JM, Hertz DL, Park JM.

Pharmacogenomics. 2019 Apr;20(6):421-432. doi: 10.2217/pgs-2019-0002. Epub 2019 Apr 15.


How to improve the adenoma detection rate in colorectal cancer screening? Clinical factors and technological advancements.

Matyja M, Pasternak A, Szura M, Wysocki M, Pędziwiatr M, Rembiasz K.

Arch Med Sci. 2019 Mar;15(2):424-433. doi: 10.5114/aoms.2018.74863. Epub 2018 Apr 6.


The Autonomic Innervation and Uterine Telocyte Interplay in Leiomyoma Formation.

Aleksandrovych V, Kurnik-Łucka M, Bereza T, Białas M, Pasternak A, Cretoiu D, Walocha JA, Gil K.

Cell Transplant. 2019 May;28(5):619-629. doi: 10.1177/0963689719833303. Epub 2019 Mar 6.


Dendritic cells potently purge latent HIV-1 beyond TCR-stimulation, activating the PI3K-Akt-mTOR pathway.

van Montfort T, van der Sluis R, Darcis G, Beaty D, Groen K, Pasternak AO, Pollakis G, Vink M, Westerhout EM, Hamdi M, Bakker M, van der Putten B, Jurriaans S, Prins JH, Jeeninga R, Thomas AAM, Speijer D, Berkhout B.

EBioMedicine. 2019 Apr;42:97-108. doi: 10.1016/j.ebiom.2019.02.014. Epub 2019 Feb 26.


Molecular profiling and targeted therapy in pediatric gliomas: review and consensus recommendations.

Miklja Z, Pasternak A, Stallard S, Nicolaides T, Kline-Nunnally C, Cole B, Beroukhim R, Bandopadhayay P, Chi S, Ramkissoon SH, Mullan B, Bruzek AK, Gauthier A, Garcia T, Atchison C, Marini B, Fouladi M, Parsons DW, Leary S, Mueller S, Ligon KL, Koschmann C.

Neuro Oncol. 2019 Feb 26. pii: noz022. doi: 10.1093/neuonc/noz022. [Epub ahead of print]


A systematic study on the influence of thermodynamic asymmetry of 5'-ends of siRNA duplexes in relation to their silencing potency.

Lisowiec-Wąchnicka J, Bartyś N, Pasternak A.

Sci Rep. 2019 Feb 21;9(1):2477. doi: 10.1038/s41598-018-36620-9.


Longitudinal HIV sequencing reveals reservoir expression leading to decay which is obscured by clonal expansion.

Pinzone MR, VanBelzen DJ, Weissman S, Bertuccio MP, Cannon L, Venanzi-Rullo E, Migueles S, Jones RB, Mota T, Joseph SB, Groen K, Pasternak AO, Hwang WT, Sherman B, Vourekas A, Nunnari G, O'Doherty U.

Nat Commun. 2019 Feb 13;10(1):728. doi: 10.1038/s41467-019-08431-7.


Improved RE31 Analogues Containing Modified Nucleic Acid Monomers: Thermodynamic, Structural, and Biological Effects.

Kotkowiak W, Wengel J, Scotton CJ, Pasternak A.

J Med Chem. 2019 Mar 14;62(5):2499-2507. doi: 10.1021/acs.jmedchem.8b01806. Epub 2019 Feb 22.


Revised upper limb module for spinal muscular atrophy: 12 month changes.

Pera MC, Coratti G, Mazzone ES, Montes J, Scoto M, De Sanctis R, Main M, Mayhew A, Muni Lofra R, Dunaway Young S, Glanzman AM, Duong T, Pasternak A, Ramsey D, Darras B, Day JW, Finkel RS, De Vivo DC, Sormani MP, Bovis F, Straub V, Muntoni F, Pane M, Mercuri E; iSMAC Consortium Group.

Muscle Nerve. 2019 Apr;59(4):426-430. doi: 10.1002/mus.26419. Epub 2019 Feb 7.


Contribution of 3'T and 3'TT overhangs to the thermodynamic stability of model siRNA duplexes.

Lisowiec-Wachnicka J, Znosko BM, Pasternak A.

Biophys Chem. 2019 Mar;246:35-39. doi: 10.1016/j.bpc.2018.12.006. Epub 2019 Jan 7.


Identification of uterine telocytes and their architecture in leiomyoma.

Aleksandrovych V, Białas M, Pasternak A, Bereza T, Sajewicz M, Walocha J, Gil K.

Folia Med Cracov. 2018;58(3):89-102.


Highlights from the 22nd International AIDS Conference (AIDS 2018), 22-27 July 2018, Amsterdam, the Netherlands.

Psomas CK, Fidler S, Macartney M, Jeffreys R, Reilly L, Collins S, Moreno S, Routy JP, Pasternak A, Kinloch-de Loës S.

J Virus Erad. 2018 Oct 1;4(4):238-247.


Colonoscopy for colorectal cancer screening - is it effective in the hands of a general surgery resident?

Matyja M, Pasternak A, Wysocki M, Pędziwiatr M, Szura M, Rembiasz K.

Pol Przegl Chir. 2018 Jun 4;90(5):6-12. doi: 10.5604/01.3001.0012.0755.


Posttranscriptional Regulation of HIV-1 Gene Expression during Replication and Reactivation from Latency by Nuclear Matrix Protein MATR3.

Sarracino A, Gharu L, Kula A, Pasternak AO, Avettand-Fenoel V, Rouzioux C, Bardina M, De Wit S, Benkirane M, Berkhout B, Van Lint C, Marcello A.

MBio. 2018 Nov 13;9(6). pii: e02158-18. doi: 10.1128/mBio.02158-18.


Genetic population structure of the pelagic mollusk Limacina helicina in the Kara Sea.

Abyzova GA, Nikitin MA, Popova OV, Pasternak AF.

PeerJ. 2018 Nov 6;6:e5709. doi: 10.7717/peerj.5709. eCollection 2018.


Motor Function Test Reliability During the NeuroNEXT Spinal Muscular Atrophy Infant Biomarker Study.

Krosschell KJ, Bosch M, Nelson L, Duong T, Lowes LP, Alfano LN, Benjamin D, Carry TB, Devine G, Kelley C, Gadekan R, Malkus EC, Pasternak A, Provance-Orr S, Roemeiser-Logan L, Nicorici A, Trussell D, Young SD, Fetterman JR, Montes J, Powers PJ, Quinones R, Quigley J, Coffey CS, Yankey JW, Bartlett A, Kissel JT, Kolb SJ; NeuroNEXT Clinical Trial Network and on behalf of the NN101 SMA Biomarker Investigators.

J Neuromuscul Dis. 2018;5(4):509-521. doi: 10.3233/JND-180327.


Lipectomy Technique as a Second-stage Procedure for Primarily Matured, Deep Outflow Vein in Obese Individuals.

Sułkowski L, Matyja M, Pasternak A.

Indian J Nephrol. 2018 Jul-Aug;28(4):320-322. doi: 10.4103/ijn.IJN_42_17.


Classification system of the tibiofibular syndesmosis blood supply and its clinical relevance.

Mróz I, Bachul PJ, Tomaszewski KA, Bereza T, Gil K, Walocha JA, Pasternak A.

Sci Rep. 2018 Jul 12;8(1):10507. doi: 10.1038/s41598-018-28902-z.


Ambulatory function in spinal muscular atrophy: Age-related patterns of progression.

Montes J, McDermott MP, Mirek E, Mazzone ES, Main M, Glanzman AM, Duong T, Young SD, Salazar R, Pasternak A, Gee R, De Sanctis R, Coratti G, Forcina N, Fanelli L, Ramsey D, Milev E, Civitello M, Pane M, Pera MC, Scoto M, Day JW, Tennekoon G, Finkel RS, Darras BT, Muntoni F, De Vivo DC, Mercuri E.

PLoS One. 2018 Jun 26;13(6):e0199657. doi: 10.1371/journal.pone.0199657. eCollection 2018.


Quantitative Evaluation of Lower Extremity Joint Contractures in Spinal Muscular Atrophy: Implications for Motor Function.

Salazar R, Montes J, Dunaway Young S, McDermott MP, Martens W, Pasternak A, Quigley J, Mirek E, Glanzman AM, Civitello M, Gee R, Duong T, Mazzone ES, Main M, Mayhew A, Ramsey D, Muni Lofra R, Coratti G, Fanelli L, De Sanctis R, Forcina N, Chiriboga C, Darras BT, Tennekoon GI, Scoto M, Day JW, Finkel R, Muntoni F, Mercuri E, De Vivo DC.

Pediatr Phys Ther. 2018 Jul;30(3):209-215. doi: 10.1097/PEP.0000000000000515.


Trematode cercariae as prey for zooplankton: effect on fitness traits of predators.

Mironova E, Gopko M, Pasternak A, Mikheev V, Taskinen J.

Parasitology. 2019 Jan;146(1):105-111. doi: 10.1017/S0031182018000963. Epub 2018 Jun 14.


Novel isoguanine derivative of unlocked nucleic acid-Investigations of thermodynamics and biological potential of modified thrombin binding aptamer.

Kotkowiak W, Czapik T, Pasternak A.

PLoS One. 2018 May 24;13(5):e0197835. doi: 10.1371/journal.pone.0197835. eCollection 2018.


The HIV-1 Tat Protein Enhances Splicing at the Major Splice Donor Site.

Mueller N, Pasternak AO, Klaver B, Cornelissen M, Berkhout B, Das AT.

J Virol. 2018 Jun 29;92(14). pii: e01855-17. doi: 10.1128/JVI.01855-17. Print 2018 Jul 15.


[Preventability of perinatal losses by the example of the large industrial cities Chelyabinsk and Novosibirsk].

Kovalenko VL, Kazachkov EL, Nadeev AP, Pasternak AE, Pasternak IA, Karpov MA, Zhukova VA, Chernova TG, Kazachkova EA, Voropaeva EE, Klesova NI.

Arkh Patol. 2018;80(2):7-10. doi: 10.17116/patol20188027-10. Russian.


Cecal intubation rates in different eras of endoscopic technological development.

Matyja M, Pasternak A, Szura M, Pędziwiatr M, Major P, Rembiasz K.

Wideochir Inne Tech Maloinwazyjne. 2018 Mar;13(1):67-73. doi: 10.5114/wiitm.2018.74341. Epub 2018 Mar 19.


CYP3A pharmacogenetic association with tacrolimus pharmacokinetics differs based on route of drug administration.

Pasternak AL, Zhang L, Hertz DL.

Pharmacogenomics. 2018 Apr;19(6):563-576. doi: 10.2217/pgs-2018-0003. Epub 2018 Apr 9. Review.


Early Identification of ASD Through Telemedicine: Potential Value for Underserved Populations.

Juárez AP, Weitlauf AS, Nicholson A, Pasternak A, Broderick N, Hine J, Stainbrook JA, Warren Z.

J Autism Dev Disord. 2018 Aug;48(8):2601-2610. doi: 10.1007/s10803-018-3524-y.


Thermodynamic, Anticoagulant, and Antiproliferative Properties of Thrombin Binding Aptamer Containing Novel UNA Derivative.

Kotkowiak W, Lisowiec-Wachnicka J, Grynda J, Kierzek R, Wengel J, Pasternak A.

Mol Ther Nucleic Acids. 2018 Mar 2;10:304-316. doi: 10.1016/j.omtn.2017.12.013. Epub 2017 Dec 30.


What do we measure when we measure cell-associated HIV RNA.

Pasternak AO, Berkhout B.

Retrovirology. 2018 Jan 29;15(1):13. doi: 10.1186/s12977-018-0397-2. Review.


Zooplankton impact on the organic matter flux of Siberian Arctic seas.

Pasternak AF, Drits AV, Kravchishina MD, Flint MV.

Dokl Biol Sci. 2017 Nov;477(1):232-235. doi: 10.1134/S0012496617060060. Epub 2018 Jan 4.


Development of the CNS TAP tool for the selection of precision medicine therapies in neuro-oncology.

Linzey JR, Marini BL, Pasternak A, Smith C, Miklja Z, Zhao L, Kumar-Sinha C, Paul A, Harris N, Robertson PL, Hoffman LM, Chinnaiyan A, Mody R, Koschmann C.

J Neurooncol. 2018 Mar;137(1):155-169. doi: 10.1007/s11060-017-2708-1. Epub 2017 Dec 12.


The therapeutic potential of targeting the Kir1.1 (renal outer medullary K+) channel.

Priest BT, Pasternak A.

Future Med Chem. 2017 Oct;9(16):1963-1977. doi: 10.4155/fmc-2017-0083. Epub 2017 Oct 27. Review.


Crossing Anatomic Barriers-Transplantation of a Kidney with 5 Arteries, Duplication of the Pyelocalyceal System, and Double Ureter.

Bachul PJ, Osuch C, Chang ES, Bętkowska-Prokop A, Pasternak A, Szura M, Matyja A, Walocha JA.

Cell Transplant. 2017 Oct;26(10):1669-1672. doi: 10.1177/0963689717722169. Epub 2017 Sep 21.


Germline genetic variants with implications for disease risk and therapeutic outcomes.

Pasternak AL, Ward KM, Luzum JA, Ellingrod VL, Hertz DL.

Physiol Genomics. 2017 Oct 1;49(10):567-581. doi: 10.1152/physiolgenomics.00035.2017. Epub 2017 Sep 8. Review.


Freshwater mussels (Anodonta anatina) reduce transmission of a common fish trematode (eye fluke, Diplostomum pseudospathaceum).

Gopko M, Mironova E, Pasternak A, Mikheev V, Taskinen J.

Parasitology. 2017 Dec;144(14):1971-1979. doi: 10.1017/S0031182017001421. Epub 2017 Aug 2.


Institutional profile of pharmacogenetics within University of Michigan College of Pharmacy.

Hertz DL, Luzum JA, Pasternak AL, Ward KM, Zhu HJ, Rae JM, Ellingrod VL.

Pharmacogenomics. 2017 Jul 26. doi: 10.2217/pgs-2017-0107. [Epub ahead of print]


Residua of thymus in the mediastinum - clinical aspects - cadaveric study.

Mizia E, Klimek-Piotrowska W, Kużdżał J, Konopka T, Lis M, Pankowski J, Pasternak A, Zawiliński J, Wrona A.

Folia Med Cracov. 2017;57(1):23-28.


Telocytes: facts, speculations and myths (Review article).

Aleksandrovych V, Pasternak A, Basta P, Sajewicz M, Walocha JA, Gil K.

Folia Med Cracov. 2017;57(1):5-22. Review.


Synthesis and hybridization properties of oligonucleotide analogues with novel acyclic triazole internucleotide linkages.

Gładysz M, Nowak-Karnowska J, Pasternak A, Milecki J.

Bioorg Chem. 2017 Jun;72:161-167. doi: 10.1016/j.bioorg.2017.04.004. Epub 2017 Apr 12.


Improvement of hERG-ROMK index of spirocyclic ROMK inhibitors through scaffold optimization and incorporation of novel pharmacophores.

Dong S, VanGelder K, Shi ZC, Yu Y, Wu Z, Ferguson R, Guo ZZ, Tang H, Frie J, Fu Q, Gu X, Priest BT, Thomas-Fowlkes B, Weinglass A, Margulis M, Liu J, Pai LY, Hampton C, Haimbach RE, Owens K, Tong V, Xu S, Hu M, Zingaro GJ, Morissette P, Ehrhart J, Roy S, Sullivan K, Pasternak A.

Bioorg Med Chem Lett. 2017 Jun 1;27(11):2559-2566. doi: 10.1016/j.bmcl.2017.03.086. Epub 2017 Mar 30.


Thermodynamic, structural and fluorescent characteristics of DNA hairpins containing functionalized pyrrolo-2'-deoxycytidines.

Jahnz-Wechmann Z, Lisowiec-Wachnicka J, Framski G, Kosman J, Boryski J, Pasternak A.

Bioorg Chem. 2017 Apr;71:294-298. doi: 10.1016/j.bioorg.2017.02.014. Epub 2017 Mar 2.


Quantitative muscle ultrasound detects disease progression in Duchenne muscular dystrophy.

Zaidman CM, Wu JS, Kapur K, Pasternak A, Madabusi L, Yim S, Pacheck A, Szelag H, Harrington T, Darras BT, Rutkove SB.

Ann Neurol. 2017 May;81(5):633-640. doi: 10.1002/ana.24904. Epub 2017 May 4.


Content validity and clinical meaningfulness of the HFMSE in spinal muscular atrophy.

Pera MC, Coratti G, Forcina N, Mazzone ES, Scoto M, Montes J, Pasternak A, Mayhew A, Messina S, Sframeli M, Main M, Lofra RM, Duong T, Ramsey D, Dunaway S, Salazar R, Fanelli L, Civitello M, de Sanctis R, Antonaci L, Lapenta L, Lucibello S, Pane M, Day J, Darras BT, De Vivo DC, Muntoni F, Finkel R, Mercuri E.

BMC Neurol. 2017 Feb 23;17(1):39. doi: 10.1186/s12883-017-0790-9.


Inhibition of ROMK blocks macula densa tubuloglomerular feedback yet causes renal vasoconstriction in anesthetized rats.

Araujo M, Welch WJ, Zhou X, Sullivan K, Walsh S, Pasternak A, Wilcox CS.

Am J Physiol Renal Physiol. 2017 Jun 1;312(6):F1120-F1127. doi: 10.1152/ajprenal.00662.2016. Epub 2017 Feb 22.

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