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Items: 7

1.

The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction.

Makropoulos A, Robinson EC, Schuh A, Wright R, Fitzgibbon S, Bozek J, Counsell SJ, Steinweg J, Vecchiato K, Passerat-Palmbach J, Lenz G, Mortari F, Tenev T, Duff EP, Bastiani M, Cordero-Grande L, Hughes E, Tusor N, Tournier JD, Hutter J, Price AN, Teixeira RPAG, Murgasova M, Victor S, Kelly C, Rutherford MA, Smith SM, Edwards AD, Hajnal JV, Jenkinson M, Rueckert D.

Neuroimage. 2018 Jun;173:88-112. doi: 10.1016/j.neuroimage.2018.01.054. Epub 2018 Jan 31.

PMID:
29409960
2.

Multi-Atlas Segmentation Using Partially Annotated Data: Methods and Annotation Strategies.

Koch LM, Rajchl M, Bai W, Baumgartner CF, Tong T, Passerat-Palmbach J, Aljabar P, Rueckert D, Koch LM, Rajchl M, Wenjia Bai, Baumgartner CF, Tong Tong, Passerat-Palmbach J, Aljabar P, Rueckert D, Bai W, Passerat-Palmbach J, Rajchl M, Tong T, Baumgartner CF, Koch LM, Rueckert D, Aljabar P.

IEEE Trans Pattern Anal Mach Intell. 2018 Jul;40(7):1683-1696. doi: 10.1109/TPAMI.2017.2711020. Epub 2017 Aug 22.

3.

Reproducible Large-Scale Neuroimaging Studies with the OpenMOLE Workflow Management System.

Passerat-Palmbach J, Reuillon R, Leclaire M, Makropoulos A, Robinson EC, Parisot S, Rueckert D.

Front Neuroinform. 2017 Mar 22;11:21. doi: 10.3389/fninf.2017.00021. eCollection 2017.

4.

DeepCut: Object Segmentation From Bounding Box Annotations Using Convolutional Neural Networks.

Rajchl M, Lee MC, Oktay O, Kamnitsas K, Passerat-Palmbach J, Bai W, Damodaram M, Rutherford MA, Hajnal JV, Kainz B, Rueckert D.

IEEE Trans Med Imaging. 2017 Feb;36(2):674-683. doi: 10.1109/TMI.2016.2621185. Epub 2016 Nov 9.

5.

Group-wise parcellation of the cortex through multi-scale spectral clustering.

Parisot S, Arslan S, Passerat-Palmbach J, Wells WM 3rd, Rueckert D.

Neuroimage. 2016 Aug 1;136:68-83. doi: 10.1016/j.neuroimage.2016.05.035. Epub 2016 May 15.

6.

Tractography-Driven Groupwise Multi-scale Parcellation of the Cortex.

Parisot S, Arslan S, Passerat-Palmbach J, Wells WM 3rd, Rueckert D.

Inf Process Med Imaging. 2015;24:600-12.

7.

Multi-atlas Segmentation as a Graph Labelling Problem: Application to Partially Annotated Atlas Data.

Koch LM, Rajchl M, Tong T, Passerat-Palmbach J, Aljabar P, Rueckert D.

Inf Process Med Imaging. 2015;24:221-32.

PMID:
26221676

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