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Items: 11

1.

An Open Library of Human Kinase Domain Constructs for Automated Bacterial Expression.

Albanese SK, Parton DL, Işık M, Rodríguez-Laureano L, Hanson SM, Behr JM, Gradia S, Jeans C, Levinson NM, Seeliger MA, Chodera JD.

Biochemistry. 2018 Aug 7;57(31):4675-4689. doi: 10.1021/acs.biochem.7b01081. Epub 2018 Jul 26.

PMID:
30004690
2.

Mechanistically distinct cancer-associated mTOR activation clusters predict sensitivity to rapamycin.

Xu J, Pham CG, Albanese SK, Dong Y, Oyama T, Lee CH, Rodrik-Outmezguine V, Yao Z, Han S, Chen D, Parton DL, Chodera JD, Rosen N, Cheng EH, Hsieh JJ.

J Clin Invest. 2016 Sep 1;126(9):3526-40. doi: 10.1172/JCI86120. Epub 2016 Aug 2.

3.

Ensembler: Enabling High-Throughput Molecular Simulations at the Superfamily Scale.

Parton DL, Grinaway PB, Hanson SM, Beauchamp KA, Chodera JD.

PLoS Comput Biol. 2016 Jun 23;12(6):e1004728. doi: 10.1371/journal.pcbi.1004728. eCollection 2016 Jun.

4.

Nothing to sneeze at: a dynamic and integrative computational model of an influenza A virion.

Reddy T, Shorthouse D, Parton DL, Jefferys E, Fowler PW, Chavent M, Baaden M, Sansom MSP.

Structure. 2015 Mar 3;23(3):584-597. doi: 10.1016/j.str.2014.12.019. Epub 2015 Feb 19.

5.

Electrostatic interactions between the Bni1p Formin FH2 domain and actin influence actin filament nucleation.

Baker JL, Courtemanche N, Parton DL, McCullagh M, Pollard TD, Voth GA.

Structure. 2015 Jan 6;23(1):68-79. doi: 10.1016/j.str.2014.10.014. Epub 2014 Dec 4.

6.

Formation of raft-like assemblies within clusters of influenza hemagglutinin observed by MD simulations.

Parton DL, Tek A, Baaden M, Sansom MS.

PLoS Comput Biol. 2013 Apr;9(4):e1003034. doi: 10.1371/journal.pcbi.1003034. Epub 2013 Apr 11.

7.

Multi-scale simulation of the simian immunodeficiency virus fusion peptide.

Crowet JM, Parton DL, Hall BA, Steinhauer S, Brasseur R, Lins L, Sansom MS.

J Phys Chem B. 2012 Nov 26;116(46):13713-21. doi: 10.1021/jp3027385. Epub 2012 Nov 9.

PMID:
23094791
8.

Multiscale simulations of the antimicrobial peptide maculatin 1.1: water permeation through disordered aggregates.

Parton DL, Akhmatskaya EV, Sansom MS.

J Phys Chem B. 2012 Jul 26;116(29):8485-93. doi: 10.1021/jp212358y. Epub 2012 Mar 9.

PMID:
22380536
9.

Aggregation of model membrane proteins, modulated by hydrophobic mismatch, membrane curvature, and protein class.

Parton DL, Klingelhoefer JW, Sansom MS.

Biophys J. 2011 Aug 3;101(3):691-9. doi: 10.1016/j.bpj.2011.06.048.

10.

The discovery of phthalazinone-based human H1 and H3 single-ligand antagonists suitable for intranasal administration for the treatment of allergic rhinitis.

Procopiou PA, Browning C, Buckley JM, Clark KL, Fechner L, Gore PM, Hancock AP, Hodgson ST, Holmes DS, Kranz M, Looker BE, Morriss KM, Parton DL, Russell LJ, Slack RJ, Sollis SL, Vile S, Watts CJ.

J Med Chem. 2011 Apr 14;54(7):2183-95. doi: 10.1021/jm1013874. Epub 2011 Mar 7.

PMID:
21381763
11.

Coarse-grained simulations of the membrane-active antimicrobial Peptide maculatin 1.1.

Bond PJ, Parton DL, Clark JF, Sansom MS.

Biophys J. 2008 Oct;95(8):3802-15. doi: 10.1529/biophysj.108.128686. Epub 2008 Jul 18.

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