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Items: 1 to 50 of 73

1.

Chromatic Acclimation in Cyanobacteria: A Diverse and Widespread Process for Optimizing Photosynthesis.

Sanfilippo JE, Garczarek L, Partensky F, Kehoe DM.

Annu Rev Microbiol. 2019 Sep 8;73:407-433. doi: 10.1146/annurev-micro-020518-115738.

PMID:
31500538
2.

Interplay between differentially expressed enzymes contributes to light color acclimation in marine Synechococcus.

Sanfilippo JE, Nguyen AA, Garczarek L, Karty JA, Pokhrel S, Strnat JA, Partensky F, Schluchter WM, Kehoe DM.

Proc Natl Acad Sci U S A. 2019 Mar 26;116(13):6457-6462. doi: 10.1073/pnas.1810491116. Epub 2019 Mar 7.

3.

Comparison of photosynthetic performances of marine picocyanobacteria with different configurations of the oxygen-evolving complex.

Partensky F, Mella-Flores D, Six C, Garczarek L, Czjzek M, Marie D, Kotabová E, Felcmanová K, Prášil O.

Photosynth Res. 2018 Oct;138(1):57-71. doi: 10.1007/s11120-018-0539-3. Epub 2018 Jun 25.

PMID:
29938315
4.

A novel species of the marine cyanobacterium Acaryochloris with a unique pigment content and lifestyle.

Partensky F, Six C, Ratin M, Garczarek L, Vaulot D, Probert I, Calteau A, Gourvil P, Marie D, Grébert T, Bouchier C, Le Panse S, Gachenot M, Rodríguez F, Garrido JL.

Sci Rep. 2018 Jun 14;8(1):9142. doi: 10.1038/s41598-018-27542-7.

5.

Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria.

Grébert T, Doré H, Partensky F, Farrant GK, Boss ES, Picheral M, Guidi L, Pesant S, Scanlan DJ, Wincker P, Acinas SG, Kehoe DM, Garczarek L.

Proc Natl Acad Sci U S A. 2018 Feb 27;115(9):E2010-E2019. doi: 10.1073/pnas.1717069115. Epub 2018 Feb 12.

6.

Thermoacclimation and genome adaptation of the membrane lipidome in marine Synechococcus.

Pittera J, Jouhet J, Breton S, Garczarek L, Partensky F, Maréchal É, Nguyen NA, Doré H, Ratin M, Pitt FD, Scanlan DJ, Six C.

Environ Microbiol. 2018 Feb;20(2):612-631. doi: 10.1111/1462-2920.13985. Epub 2017 Dec 14.

PMID:
29124854
7.

Responses of the picoprasinophyte Micromonas commoda to light and ultraviolet stress.

Cuvelier ML, Guo J, Ortiz AC, van Baren MJ, Tariq MA, Partensky F, Worden AZ.

PLoS One. 2017 Mar 9;12(3):e0172135. doi: 10.1371/journal.pone.0172135. eCollection 2017.

8.

Adaptation to Blue Light in Marine Synechococcus Requires MpeU, an Enzyme with Similarity to Phycoerythrobilin Lyase Isomerases.

Mahmoud RM, Sanfilippo JE, Nguyen AA, Strnat JA, Partensky F, Garczarek L, Abo El Kassem N, Kehoe DM, Schluchter WM.

Front Microbiol. 2017 Feb 21;8:243. doi: 10.3389/fmicb.2017.00243. eCollection 2017.

9.

Phylogeography and pigment type diversity of Synechococcus cyanobacteria in surface waters of the northwestern pacific ocean.

Xia X, Partensky F, Garczarek L, Suzuki K, Guo C, Yan Cheung S, Liu H.

Environ Microbiol. 2017 Jan;19(1):142-158. doi: 10.1111/1462-2920.13541. Epub 2016 Dec 8.

PMID:
27668842
10.

Adaptive thermostability of light-harvesting complexes in marine picocyanobacteria.

Pittera J, Partensky F, Six C.

ISME J. 2017 Jan;11(1):112-124. doi: 10.1038/ismej.2016.102. Epub 2016 Jul 26.

11.

Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria.

Farrant GK, Doré H, Cornejo-Castillo FM, Partensky F, Ratin M, Ostrowski M, Pitt FD, Wincker P, Scanlan DJ, Iudicone D, Acinas SG, Garczarek L.

Proc Natl Acad Sci U S A. 2016 Jun 14;113(24):E3365-74. doi: 10.1073/pnas.1524865113. Epub 2016 Jun 2.

12.

Self-regulating genomic island encoding tandem regulators confers chromatic acclimation to marine Synechococcus.

Sanfilippo JE, Nguyen AA, Karty JA, Shukla A, Schluchter WM, Garczarek L, Partensky F, Kehoe DM.

Proc Natl Acad Sci U S A. 2016 May 24;113(21):6077-82. doi: 10.1073/pnas.1600625113. Epub 2016 May 5.

13.

WiseScaffolder: an algorithm for the semi-automatic scaffolding of Next Generation Sequencing data.

Farrant GK, Hoebeke M, Partensky F, Andres G, Corre E, Garczarek L.

BMC Bioinformatics. 2015 Sep 3;16:281. doi: 10.1186/s12859-015-0705-y.

14.

Development of a targeted metagenomic approach to study a genomic region involved in light harvesting in marine Synechococcus.

Humily F, Farrant GK, Marie D, Partensky F, Mazard S, Perennou M, Labadie K, Aury JM, Wincker P, Segui AN, Scanlan DJ, Garczarek L.

FEMS Microbiol Ecol. 2014 May;88(2):231-49. doi: 10.1111/1574-6941.12285. Epub 2014 Feb 24.

15.

A gene island with two possible configurations is involved in chromatic acclimation in marine Synechococcus.

Humily F, Partensky F, Six C, Farrant GK, Ratin M, Marie D, Garczarek L.

PLoS One. 2013 Dec 31;8(12):e84459. doi: 10.1371/journal.pone.0084459. eCollection 2013.

16.

Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida.

Collén J, Porcel B, Carré W, Ball SG, Chaparro C, Tonon T, Barbeyron T, Michel G, Noel B, Valentin K, Elias M, Artiguenave F, Arun A, Aury JM, Barbosa-Neto JF, Bothwell JH, Bouget FY, Brillet L, Cabello-Hurtado F, Capella-Gutiérrez S, Charrier B, Cladière L, Cock JM, Coelho SM, Colleoni C, Czjzek M, Da Silva C, Delage L, Denoeud F, Deschamps P, Dittami SM, Gabaldón T, Gachon CM, Groisillier A, Hervé C, Jabbari K, Katinka M, Kloareg B, Kowalczyk N, Labadie K, Leblanc C, Lopez PJ, McLachlan DH, Meslet-Cladiere L, Moustafa A, Nehr Z, Nyvall Collén P, Panaud O, Partensky F, Poulain J, Rensing SA, Rousvoal S, Samson G, Symeonidi A, Weissenbach J, Zambounis A, Wincker P, Boyen C.

Proc Natl Acad Sci U S A. 2013 Mar 26;110(13):5247-52. doi: 10.1073/pnas.1221259110. Epub 2013 Mar 15.

17.

CyanoLyase: a database of phycobilin lyase sequences, motifs and functions.

Bretaudeau A, Coste F, Humily F, Garczarek L, Le Corguillé G, Six C, Ratin M, Collin O, Schluchter WM, Partensky F.

Nucleic Acids Res. 2013 Jan;41(Database issue):D396-401. doi: 10.1093/nar/gks1091. Epub 2012 Nov 21.

18.

Phycoerythrin-specific bilin lyase-isomerase controls blue-green chromatic acclimation in marine Synechococcus.

Shukla A, Biswas A, Blot N, Partensky F, Karty JA, Hammad LA, Garczarek L, Gutu A, Schluchter WM, Kehoe DM.

Proc Natl Acad Sci U S A. 2012 Dec 4;109(49):20136-41. doi: 10.1073/pnas.1211777109. Epub 2012 Nov 16.

19.

Prochlorococcus and Synechococcus have Evolved Different Adaptive Mechanisms to Cope with Light and UV Stress.

Mella-Flores D, Six C, Ratin M, Partensky F, Boutte C, Le Corguillé G, Marie D, Blot N, Gourvil P, Kolowrat C, Garczarek L.

Front Microbiol. 2012 Aug 8;3:285. eCollection 2012.

20.

Ecological and evolutionary genomics of marine photosynthetic organisms.

Coelho SM, Simon N, Ahmed S, Cock JM, Partensky F.

Mol Ecol. 2013 Feb;22(3):867-907. doi: 10.1111/mec.12000. Epub 2012 Sep 18. Review.

PMID:
22989289
21.

Complex microbiome underlying secondary and primary metabolism in the tunicate-Prochloron symbiosis.

Donia MS, Fricke WF, Partensky F, Cox J, Elshahawi SI, White JR, Phillippy AM, Schatz MC, Piel J, Haygood MG, Ravel J, Schmidt EW.

Proc Natl Acad Sci U S A. 2011 Dec 20;108(51):E1423-32. doi: 10.1073/pnas.1111712108. Epub 2011 Nov 28.

22.

Microbiology: Arms race in a drop of sea water.

Partensky F, Garczarek L.

Nature. 2011 Jun 29;474(7353):582-3. doi: 10.1038/474582a. No abstract available.

PMID:
21720356
23.

Multi-locus sequence analysis, taxonomic resolution and biogeography of marine Synechococcus.

Mazard S, Ostrowski M, Partensky F, Scanlan DJ.

Environ Microbiol. 2012 Feb;14(2):372-86. doi: 10.1111/j.1462-2920.2011.02514.x. Epub 2011 Jun 8.

PMID:
21651684
24.

Prochlorococcus: advantages and limits of minimalism.

Partensky F, Garczarek L.

Ann Rev Mar Sci. 2010;2:305-31. Review.

PMID:
21141667
25.

Ultraviolet stress delays chromosome replication in light/dark synchronized cells of the marine cyanobacterium Prochlorococcus marinus PCC9511.

Kolowrat C, Partensky F, Mella-Flores D, Le Corguillé G, Boutte C, Blot N, Ratin M, Ferréol M, Lecomte X, Gourvil P, Lennon JF, Kehoe DM, Garczarek L.

BMC Microbiol. 2010 Jul 29;10:204. doi: 10.1186/1471-2180-10-204.

26.

Photosystem I gene cassettes are present in marine virus genomes.

Sharon I, Alperovitch A, Rohwer F, Haynes M, Glaser F, Atamna-Ismaeel N, Pinter RY, Partensky F, Koonin EV, Wolf YI, Nelson N, Béjà O.

Nature. 2009 Sep 10;461(7261):258-262. doi: 10.1038/nature08284. Epub 2009 Aug 26.

27.

Microbial community genomics in eastern Mediterranean Sea surface waters.

Feingersch R, Suzuki MT, Shmoish M, Sharon I, Sabehi G, Partensky F, Béjà O.

ISME J. 2010 Jan;4(1):78-87. doi: 10.1038/ismej.2009.92. Epub 2009 Aug 20.

PMID:
19693100
28.

Ecological genomics of marine picocyanobacteria.

Scanlan DJ, Ostrowski M, Mazard S, Dufresne A, Garczarek L, Hess WR, Post AF, Hagemann M, Paulsen I, Partensky F.

Microbiol Mol Biol Rev. 2009 Jun;73(2):249-99. doi: 10.1128/MMBR.00035-08. Review.

29.

Phycourobilin in trichromatic phycocyanin from oceanic cyanobacteria is formed post-translationally by a phycoerythrobilin lyase-isomerase.

Blot N, Wu XJ, Thomas JC, Zhang J, Garczarek L, Böhm S, Tu JM, Zhou M, Plöscher M, Eichacker L, Partensky F, Scheer H, Zhao KH.

J Biol Chem. 2009 Apr 3;284(14):9290-8. doi: 10.1074/jbc.M809784200. Epub 2009 Jan 31.

30.

DNA/RNA analysis of phytoplankton by flow cytometry.

Marie D, Simon N, Guillou L, Partensky F, Vaulot D.

Curr Protoc Cytom. 2001 May;Chapter 11:Unit 11.12. doi: 10.1002/0471142956.cy1112s11.

PMID:
18770686
31.

Enumeration of phytoplankton, bacteria, and viruses in marine samples.

Marie D, Partensky F, Vaulot D, Brussaard C.

Curr Protoc Cytom. 2001 May;Chapter 11:Unit 11.11. doi: 10.1002/0471142956.cy1111s10.

PMID:
18770685
32.

Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria.

Dufresne A, Ostrowski M, Scanlan DJ, Garczarek L, Mazard S, Palenik BP, Paulsen IT, de Marsac NT, Wincker P, Dossat C, Ferriera S, Johnson J, Post AF, Hess WR, Partensky F.

Genome Biol. 2008;9(5):R90. doi: 10.1186/gb-2008-9-5-r90. Epub 2008 May 28.

33.

Genome streamlining results in loss of robustness of the circadian clock in the marine cyanobacterium Prochlorococcus marinus PCC 9511.

Holtzendorff J, Partensky F, Mella D, Lennon JF, Hess WR, Garczarek L.

J Biol Rhythms. 2008 Jun;23(3):187-99. doi: 10.1177/0748730408316040.

PMID:
18487411
34.

Diversity and evolution of phycobilisomes in marine Synechococcus spp.: a comparative genomics study.

Six C, Thomas JC, Garczarek L, Ostrowski M, Dufresne A, Blot N, Scanlan DJ, Partensky F.

Genome Biol. 2007;8(12):R259.

35.

UV-induced phycobilisome dismantling in the marine picocyanobacterium Synechococcus sp. WH8102.

Six C, Joubin L, Partensky F, Holtzendorff J, Garczarek L.

Photosynth Res. 2007 Apr;92(1):75-86. Epub 2007 May 16.

PMID:
17505911
36.

High vertical and low horizontal diversity of Prochlorococcus ecotypes in the Mediterranean Sea in summer.

Garczarek L, Dufresne A, Rousvoal S, West NJ, Mazard S, Marie D, Claustre H, Raimbault P, Post AF, Scanlan DJ, Partensky F.

FEMS Microbiol Ecol. 2007 May;60(2):189-206. Epub 2007 Mar 28.

37.

The cyanobacterial genome core and the origin of photosynthesis.

Mulkidjanian AY, Koonin EV, Makarova KS, Mekhedov SL, Sorokin A, Wolf YI, Dufresne A, Partensky F, Burd H, Kaznadzey D, Haselkorn R, Galperin MY.

Proc Natl Acad Sci U S A. 2006 Aug 29;103(35):13126-31. Epub 2006 Aug 21.

38.

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features.

Derelle E, Ferraz C, Rombauts S, Rouzé P, Worden AZ, Robbens S, Partensky F, Degroeve S, Echeynié S, Cooke R, Saeys Y, Wuyts J, Jabbari K, Bowler C, Panaud O, Piégu B, Ball SG, Ral JP, Bouget FY, Piganeau G, De Baets B, Picard A, Delseny M, Demaille J, Van de Peer Y, Moreau H.

Proc Natl Acad Sci U S A. 2006 Aug 1;103(31):11647-52. Epub 2006 Jul 25.

39.

Biochemical bases of type IV chromatic adaptation in marine Synechococcus spp.

Everroad C, Six C, Partensky F, Thomas JC, Holtzendorff J, Wood AM.

J Bacteriol. 2006 May;188(9):3345-56.

40.

Rapid evolutionary divergence of Photosystem I core subunits PsaA and PsaB in the marine prokaryote Prochlorococcus.

van der Staay GW, Moon-van der Staay SY, Garczarek L, Partensky F.

Photosynth Res. 2000;65(2):131-9.

PMID:
16228480
41.

New insights into the nature and phylogeny of prasinophyte antenna proteins: Ostreococcus tauri, a case study.

Six C, Worden AZ, Rodríguez F, Moreau H, Partensky F.

Mol Biol Evol. 2005 Nov;22(11):2217-30. Epub 2005 Jul 27.

PMID:
16049197
42.

Two novel phycoerythrin-associated linker proteins in the marine cyanobacterium Synechococcus sp. strain WH8102.

Six C, Thomas JC, Thion L, Lemoine Y, Zal F, Partensky F.

J Bacteriol. 2005 Mar;187(5):1685-94.

43.

Accelerated evolution associated with genome reduction in a free-living prokaryote.

Dufresne A, Garczarek L, Partensky F.

Genome Biol. 2005;6(2):R14. Epub 2005 Jan 14.

44.

Low-light-adapted Prochlorococcus species possess specific antennae for each photosystem.

Bibby TS, Mary I, Nield J, Partensky F, Barber J.

Nature. 2003 Aug 28;424(6952):1051-4.

45.

The genome of a motile marine Synechococcus.

Palenik B, Brahamsha B, Larimer FW, Land M, Hauser L, Chain P, Lamerdin J, Regala W, Allen EE, McCarren J, Paulsen I, Dufresne A, Partensky F, Webb EA, Waterbury J.

Nature. 2003 Aug 28;424(6952):1037-42. Epub 2003 Aug 13.

46.

Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome.

Dufresne A, Salanoubat M, Partensky F, Artiguenave F, Axmann IM, Barbe V, Duprat S, Galperin MY, Koonin EV, Le Gall F, Makarova KS, Ostrowski M, Oztas S, Robert C, Rogozin IB, Scanlan DJ, Tandeau de Marsac N, Weissenbach J, Wincker P, Wolf YI, Hess WR.

Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):10020-5. Epub 2003 Aug 13.

48.
49.

Synchronized expression of ftsZ in natural Prochlorococcus populations of the Red Sea.

Holtzendorff J, Marie D, Post AF, Partensky F, Rivlin A, Hess WR.

Environ Microbiol. 2002 Nov;4(11):644-53.

PMID:
12460272
50.

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