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Items: 32


Identification of the master sex determining gene in Northern pike (Esox lucius) reveals restricted sex chromosome differentiation.

Pan Q, Feron R, Yano A, Guyomard R, Jouanno E, Vigouroux E, Wen M, Busnel JM, Bobe J, Concordet JP, Parrinello H, Journot L, Klopp C, Lluch J, Roques C, Postlethwait J, Schartl M, Herpin A, Guiguen Y.

PLoS Genet. 2019 Aug 22;15(8):e1008013. doi: 10.1371/journal.pgen.1008013. eCollection 2019 Aug.


The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system.

Du K, Wuertz S, Adolfi M, Kneitz S, Stöck M, Oliveira M, Nóbrega R, Ormanns J, Kloas W, Feron R, Klopp C, Parrinello H, Journot L, He S, Postlethwait J, Meyer A, Guiguen Y, Schartl M.

Sci Rep. 2019 Mar 28;9(1):5293. doi: 10.1038/s41598-019-41457-x.


Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda.

Moné Y, Nhim S, Gimenez S, Legeai F, Seninet I, Parrinello H, Nègre N, d'Alençon E.

BMC Genomics. 2018 Nov 6;19(1):804. doi: 10.1186/s12864-018-5119-6.


High-salt-recovered sequences are associated with the active chromosomal compartment and with large ribonucleoprotein complexes including nuclear bodies.

Baudement MO, Cournac A, Court F, Seveno M, Parrinello H, Reynes C, Sabatier R, Bouschet T, Yi Z, Sallis S, Tancelin M, Rebouissou C, Cathala G, Lesne A, Mozziconacci J, Journot L, Forné T.

Genome Res. 2018 Nov;28(11):1733-1746. doi: 10.1101/gr.237073.118. Epub 2018 Oct 4.


The Genomic Basis of Color Pattern Polymorphism in the Harlequin Ladybird.

Gautier M, Yamaguchi J, Foucaud J, Loiseau A, Ausset A, Facon B, Gschloessl B, Lagnel J, Loire E, Parrinello H, Severac D, Lopez-Roques C, Donnadieu C, Manno M, Berges H, Gharbi K, Lawson-Handley L, Zang LS, Vogel H, Estoup A, Prud'homme B.

Curr Biol. 2018 Oct 22;28(20):3296-3302.e7. doi: 10.1016/j.cub.2018.08.023. Epub 2018 Aug 23.


Changes in chromatin state reveal ARNT2 at a node of a tumorigenic transcription factor signature driving glioblastoma cell aggressiveness.

Bogeas A, Morvan-Dubois G, El-Habr EA, Lejeune FX, Defrance M, Narayanan A, Kuranda K, Burel-Vandenbos F, Sayd S, Delaunay V, Dubois LG, Parrinello H, Rialle S, Fabrega S, Idbaih A, Haiech J, Bièche I, Virolle T, Goodhardt M, Chneiweiss H, Junier MP.

Acta Neuropathol. 2018 Feb;135(2):267-283. doi: 10.1007/s00401-017-1783-x. Epub 2017 Nov 17.


Identification of Plagl1/Zac1 binding sites and target genes establishes its role in the regulation of extracellular matrix genes and the imprinted gene network.

Varrault A, Dantec C, Le Digarcher A, Chotard L, Bilanges B, Parrinello H, Dubois E, Rialle S, Severac D, Bouschet T, Journot L.

Nucleic Acids Res. 2017 Oct 13;45(18):10466-10480. doi: 10.1093/nar/gkx672.


Comparative Genomics of Glossina palpalis gambiensis and G. morsitans morsitans to Reveal Gene Orthologs Involved in Infection by Trypanosoma brucei gambiense.

Hamidou Soumana I, Tchicaya B, Rialle S, Parrinello H, Geiger A.

Front Microbiol. 2017 Apr 3;8:540. doi: 10.3389/fmicb.2017.00540. eCollection 2017.


Adaptation of Propionibacterium freudenreichii to long-term survival under gradual nutritional shortage.

Aburjaile FF, Rohmer M, Parrinello H, Maillard MB, Beaucher E, Henry G, Nicolas A, Madec MN, Thierry A, Parayre S, Deutsch SM, Cocaign-Bousquet M, Miyoshi A, Azevedo V, Le Loir Y, Falentin H.

BMC Genomics. 2016 Dec 8;17(1):1007.


Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome.

Pontvianne F, Carpentier MC, Durut N, Pavlištová V, Jaške K, Schořová Š, Parrinello H, Rohmer M, Pikaard CS, Fojtová M, Fajkus J, Sáez-Vásquez J.

Cell Rep. 2016 Aug 9;16(6):1574-1587. doi: 10.1016/j.celrep.2016.07.016. Epub 2016 Jul 28.


A gene-based map of the Nod factor-independent Aeschynomene evenia sheds new light on the evolution of nodulation and legume genomes.

Chaintreuil C, Rivallan R, Bertioli DJ, Klopp C, Gouzy J, Courtois B, Leleux P, Martin G, Rami JF, Gully D, Parrinello H, Séverac D, Patrel D, Fardoux J, Ribière W, Boursot M, Cartieaux F, Czernic P, Ratet P, Mournet P, Giraud E, Arrighi JF.

DNA Res. 2016 Aug;23(4):365-76. doi: 10.1093/dnares/dsw020. Epub 2016 Jun 13.


Neural stem cell-encoded temporal patterning delineates an early window of malignant susceptibility in Drosophila.

Narbonne-Reveau K, Lanet E, Dillard C, Foppolo S, Chen CH, Parrinello H, Rialle S, Sokol NS, Maurange C.

Elife. 2016 Jun 14;5. pii: e13463. doi: 10.7554/eLife.13463.


Frequency and mitotic heritability of epimutations in Schistosoma mansoni.

Roquis D, Rognon A, Chaparro C, Boissier J, Arancibia N, Cosseau C, Parrinello H, Grunau C.

Mol Ecol. 2016 Apr;25(8):1741-58. doi: 10.1111/mec.13555. Epub 2016 Apr 20.


RNA-seq de novo Assembly Reveals Differential Gene Expression in Glossina palpalis gambiensis Infected with Trypanosoma brucei gambiense vs. Non-Infected and Self-Cured Flies.

Hamidou Soumana I, Klopp C, Ravel S, Nabihoudine I, Tchicaya B, Parrinello H, Abate L, Rialle S, Geiger A.

Front Microbiol. 2015 Nov 13;6:1259. doi: 10.3389/fmicb.2015.01259. eCollection 2015.


The Epigenome of Schistosoma mansoni Provides Insight about How Cercariae Poise Transcription until Infection.

Roquis D, Lepesant JM, Picard MA, Freitag M, Parrinello H, Groth M, Emans R, Cosseau C, Grunau C.

PLoS Negl Trop Dis. 2015 Aug 25;9(8):e0003853. doi: 10.1371/journal.pntd.0003853. eCollection 2015.


Genetic and genomic diversity studies of Acacia symbionts in Senegal reveal new species of Mesorhizobium with a putative geographical pattern.

Diouf F, Diouf D, Klonowska A, Le Queré A, Bakhoum N, Fall D, Neyra M, Parrinello H, Diouf M, Ndoye I, Moulin L.

PLoS One. 2015 Feb 6;10(2):e0117667. doi: 10.1371/journal.pone.0117667. eCollection 2015.


A systems-level approach to parental genomic imprinting: the imprinted gene network includes extracellular matrix genes and regulates cell cycle exit and differentiation.

Al Adhami H, Evano B, Le Digarcher A, Gueydan C, Dubois E, Parrinello H, Dantec C, Bouschet T, Varrault A, Journot L.

Genome Res. 2015 Mar;25(3):353-67. doi: 10.1101/gr.175919.114. Epub 2015 Jan 22.


Integrator complex regulates NELF-mediated RNA polymerase II pause/release and processivity at coding genes.

Stadelmayer B, Micas G, Gamot A, Martin P, Malirat N, Koval S, Raffel R, Sobhian B, Severac D, Rialle S, Parrinello H, Cuvier O, Benkirane M.

Nat Commun. 2014 Nov 20;5:5531. doi: 10.1038/ncomms6531.


Cooperativity, specificity, and evolutionary stability of Polycomb targeting in Drosophila.

Schuettengruber B, Oded Elkayam N, Sexton T, Entrevan M, Stern S, Thomas A, Yaffe E, Parrinello H, Tanay A, Cavalli G.

Cell Rep. 2014 Oct 9;9(1):219-233. doi: 10.1016/j.celrep.2014.08.072. Epub 2014 Oct 2.


In-cell intrabody selection from a diverse human library identifies C12orf4 protein as a new player in rodent mast cell degranulation.

Mazuc E, Guglielmi L, Bec N, Parez V, Hahn CS, Mollevi C, Parrinello H, Desvignes JP, Larroque C, Jupp R, Dariavach P, Martineau P.

PLoS One. 2014 Aug 14;9(8):e104998. doi: 10.1371/journal.pone.0104998. eCollection 2014.


The histone deacetylases sir2 and rpd3 act on ribosomal DNA to control the replication program in budding yeast.

Yoshida K, Bacal J, Desmarais D, Padioleau I, Tsaponina O, Chabes A, Pantesco V, Dubois E, Parrinello H, Skrzypczak M, Ginalski K, Lengronne A, Pasero P.

Mol Cell. 2014 May 22;54(4):691-7. doi: 10.1016/j.molcel.2014.04.032.


A genetic screen for functional partners of condensin in fission yeast.

Robellet X, Fauque L, Legros P, Mollereau E, Janczarski S, Parrinello H, Desvignes JP, Thevenin M, Bernard P.

G3 (Bethesda). 2014 Feb 19;4(2):373-81. doi: 10.1534/g3.113.009621.


Private selective sweeps identified from next-generation pool-sequencing reveal convergent pathways under selection in two inbred Schistosoma mansoni strains.

Clément JA, Toulza E, Gautier M, Parrinello H, Roquis D, Boissier J, Rognon A, Moné H, Mouahid G, Buard J, Mitta G, Grunau C.

PLoS Negl Trop Dis. 2013 Dec 12;7(12):e2591. doi: 10.1371/journal.pntd.0002591. eCollection 2013.


Ecto- and endoparasite induce similar chemical and brain neurogenomic responses in the honey bee (Apis mellifera).

McDonnell CM, Alaux C, Parrinello H, Desvignes JP, Crauser D, Durbesson E, Beslay D, Le Conte Y.

BMC Ecol. 2013 Jul 17;13:25. doi: 10.1186/1472-6785-13-25.


Microprocessor, Setx, Xrn2, and Rrp6 co-operate to induce premature termination of transcription by RNAPII.

Wagschal A, Rousset E, Basavarajaiah P, Contreras X, Harwig A, Laurent-Chabalier S, Nakamura M, Chen X, Zhang K, Meziane O, Boyer F, Parrinello H, Berkhout B, Terzian C, Benkirane M, Kiernan R.

Cell. 2012 Sep 14;150(6):1147-57. doi: 10.1016/j.cell.2012.08.004.


Unraveling cell type-specific and reprogrammable human replication origin signatures associated with G-quadruplex consensus motifs.

Besnard E, Babled A, Lapasset L, Milhavet O, Parrinello H, Dantec C, Marin JM, Lemaitre JM.

Nat Struct Mol Biol. 2012 Aug;19(8):837-44. doi: 10.1038/nsmb.2339. Epub 2012 Jul 1.


Three-dimensional folding and functional organization principles of the Drosophila genome.

Sexton T, Yaffe E, Kenigsberg E, Bantignies F, Leblanc B, Hoichman M, Parrinello H, Tanay A, Cavalli G.

Cell. 2012 Feb 3;148(3):458-72. doi: 10.1016/j.cell.2012.01.010. Epub 2012 Jan 19.


Nutrigenomics in honey bees: digital gene expression analysis of pollen's nutritive effects on healthy and varroa-parasitized bees.

Alaux C, Dantec C, Parrinello H, Le Conte Y.

BMC Genomics. 2011 Oct 10;12:496. doi: 10.1186/1471-2164-12-496.


Production of viable gametes without meiosis in maize deficient for an ARGONAUTE protein.

Singh M, Goel S, Meeley RB, Dantec C, Parrinello H, Michaud C, Leblanc O, Grimanelli D.

Plant Cell. 2011 Feb;23(2):443-58. doi: 10.1105/tpc.110.079020. Epub 2011 Feb 15.


Whole-genome in-silico subtractive hybridization (WISH)--using massive sequencing for the identification of unique and repetitive sex-specific sequences: the example of Schistosoma mansoni.

Portela J, Grunau C, Cosseau C, Beltran S, Dantec C, Parrinello H, Boissier J.

BMC Genomics. 2010 Jun 21;11:387. doi: 10.1186/1471-2164-11-387.


Novel mutations in the TCIRG1 gene encoding the a3 subunit of the vacuolar proton pump in patients affected by infantile malignant osteopetrosis.

Scimeca JC, Quincey D, Parrinello H, Romatet D, Grosgeorge J, Gaudray P, Philip N, Fischer A, Carle GF.

Hum Mutat. 2003 Feb;21(2):151-7.


The gene encoding the mouse homologue of the human osteoclast-specific 116-kDa V-ATPase subunit bears a deletion in osteosclerotic (oc/oc) mutants.

Scimeca JC, Franchi A, Trojani C, Parrinello H, Grosgeorge J, Robert C, Jaillon O, Poirier C, Gaudray P, Carle GF.

Bone. 2000 Mar;26(3):207-13.


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