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Items: 1 to 50 of 130

1.

Methane gas transport in unconfined aquifers: A numerical sensitivity study of a controlled release experiment at CFB Borden.

Klazinga DR, Steelman CM, Cahill AG, Walton KM, Endres AL, Parker BL.

J Contam Hydrol. 2019 May 30;225:103506. doi: 10.1016/j.jconhyd.2019.103506. [Epub ahead of print]

PMID:
31181538
2.

QCMAP: An Interactive Web-Tool for Performance Diagnosis and Prediction of LC-MS Systems.

Kim T, Chen IR, Parker BL, Humphrey SJ, Crossett B, Cordwell SJ, Yang P, Yang JYH.

Proteomics. 2019 May 17:e1900068. doi: 10.1002/pmic.201900068. [Epub ahead of print]

PMID:
31099962
3.

Reduced insulin action in muscle of high fat diet rats over the diurnal cycle is not associated with defective insulin signaling.

Small L, Brandon AE, Parker BL, Deshpande V, Samsudeen AF, Kowalski GM, Reznick J, Wilks DL, Preston E, Bruce CR, James DE, Turner N, Cooney GJ.

Mol Metab. 2019 Apr 12. pii: S2212-8778(19)30272-8. doi: 10.1016/j.molmet.2019.04.006. [Epub ahead of print]

4.

Drug Screening in Human PSC-Cardiac Organoids Identifies Pro-proliferative Compounds Acting via the Mevalonate Pathway.

Mills RJ, Parker BL, Quaife-Ryan GA, Voges HK, Needham EJ, Bornot A, Ding M, Andersson H, Polla M, Elliott DA, Drowley L, Clausen M, Plowright AT, Barrett IP, Wang QD, James DE, Porrello ER, Hudson JE.

Cell Stem Cell. 2019 Jun 6;24(6):895-907.e6. doi: 10.1016/j.stem.2019.03.009. Epub 2019 Mar 28.

PMID:
30930147
5.

An integrative systems genetic analysis of mammalian lipid metabolism.

Parker BL, Calkin AC, Seldin MM, Keating MF, Tarling EJ, Yang P, Moody SC, Liu Y, Zerenturk EJ, Needham EJ, Miller ML, Clifford BL, Morand P, Watt MJ, Meex RCR, Peng KY, Lee R, Jayawardana K, Pan C, Mellett NA, Weir JM, Lazarus R, Lusis AJ, Meikle PJ, James DE, de Aguiar Vallim TQ, Drew BG.

Nature. 2019 Mar;567(7747):187-193. doi: 10.1038/s41586-019-0984-y. Epub 2019 Feb 27.

PMID:
30814737
6.

Illuminating the dark phosphoproteome.

Needham EJ, Parker BL, Burykin T, James DE, Humphrey SJ.

Sci Signal. 2019 Jan 22;12(565). pii: eaau8645. doi: 10.1126/scisignal.aau8645. Review.

PMID:
30670635
7.

Toluene biodegradation in the vadose zone of a poplar phytoremediation system identified using metagenomics and toluene-specific stable carbon isotope analysis.

BenIsrael M, Wanner P, Aravena R, Parker BL, Haack EA, Tsao DT, Dunfield KE.

Int J Phytoremediation. 2019;21(1):60-69. doi: 10.1080/15226514.2018.1523873. Epub 2019 Jan 16.

PMID:
30648419
8.

Development of a human skeletal micro muscle platform with pacing capabilities.

Mills RJ, Parker BL, Monnot P, Needham EJ, Vivien CJ, Ferguson C, Parton RG, James DE, Porrello ER, Hudson JE.

Biomaterials. 2019 Apr;198:217-227. doi: 10.1016/j.biomaterials.2018.11.030. Epub 2018 Nov 28.

PMID:
30527761
9.

Diffusion-Coupled Degradation of Chlorinated Ethenes in Sandstone: An Intact Core Microcosm Study.

Yu R, Andrachek RG, Lehmicke LG, Pierce AA, Parker BL, Cherry JA, Freedman DL.

Environ Sci Technol. 2018 Dec 18;52(24):14321-14330. doi: 10.1021/acs.est.8b04144. Epub 2018 Nov 28.

PMID:
30419165
10.

Spatial variability of microbial communities in a fractured sedimentary rock matrix impacted by a mixed organics plume.

Lima GDP, Meyer JR, Khosla K, Dunfield KE, Parker BL.

J Contam Hydrol. 2018 Nov;218:110-119. doi: 10.1016/j.jconhyd.2018.10.001. Epub 2018 Oct 4.

PMID:
30342835
11.

Protein Kinase C Epsilon Deletion in Adipose Tissue, but Not in Liver, Improves Glucose Tolerance.

Brandon AE, Liao BM, Diakanastasis B, Parker BL, Raddatz K, McManus SA, O'Reilly L, Kimber E, van der Kraan AG, Hancock D, Henstridge DC, Meikle PJ, Cooney GJ, James DE, Reibe S, Febbraio MA, Biden TJ, Schmitz-Peiffer C.

Cell Metab. 2019 Jan 8;29(1):183-191.e7. doi: 10.1016/j.cmet.2018.09.013. Epub 2018 Oct 11.

PMID:
30318338
12.

Exercise-induced molecular mechanisms promoting glycogen supercompensation in human skeletal muscle.

Hingst JR, Bruhn L, Hansen MB, Rosschou MF, Birk JB, Fentz J, Foretz M, Viollet B, Sakamoto K, Færgeman NJ, Havelund JF, Parker BL, James DE, Kiens B, Richter EA, Jensen J, Wojtaszewski JFP.

Mol Metab. 2018 Oct;16:24-34. doi: 10.1016/j.molmet.2018.07.001. Epub 2018 Jul 25.

13.

Quantitative proteomic characterization of cellular pathways associated with altered insulin sensitivity in skeletal muscle following high-fat diet feeding and exercise training.

Kleinert M, Parker BL, Jensen TE, Raun SH, Pham P, Han X, James DE, Richter EA, Sylow L.

Sci Rep. 2018 Jul 16;8(1):10723. doi: 10.1038/s41598-018-28540-5.

14.

Cell electrofusion to improve efficacy and thermotolerance of the entomopathogenic fungus, Beauveria bassiana.

Davari A, Skinner M, Parker BL.

J Appl Microbiol. 2018 Nov;125(5):1482-1493. doi: 10.1111/jam.14031. Epub 2018 Sep 2.

PMID:
29939449
15.

Improving estimates of groundwater velocity in a fractured rock borehole using hydraulic and tracer dilution methods.

Maldaner CH, Quinn PM, Cherry JA, Parker BL.

J Contam Hydrol. 2018 Jul;214:75-86. doi: 10.1016/j.jconhyd.2018.05.003. Epub 2018 May 17.

PMID:
29907430
16.

High resolution spatial and temporal evolution of dissolved gases in groundwater during a controlled natural gas release experiment.

Cahill AG, Parker BL, Mayer B, Mayer KU, Cherry JA.

Sci Total Environ. 2018 May 1;622-623:1178-1192. doi: 10.1016/j.scitotenv.2017.12.049. Epub 2017 Dec 13.

PMID:
29890586
17.

Identification of Degradation Pathways of Chlorohydrocarbons in Saturated Low-Permeability Sediments Using Compound-Specific Isotope Analysis.

Wanner P, Parker BL, Chapman SW, Lima G, Gilmore A, Mack EE, Aravena R.

Environ Sci Technol. 2018 Jul 3;52(13):7296-7306. doi: 10.1021/acs.est.8b01173. Epub 2018 Jun 19.

PMID:
29865795
18.

Assessing the effect of chlorinated hydrocarbon degradation in aquitards on plume persistence due to back-diffusion.

Wanner P, Parker BL, Hunkeler D.

Sci Total Environ. 2018 Aug 15;633:1602-1612. doi: 10.1016/j.scitotenv.2018.03.192. Epub 2018 Apr 5.

PMID:
29758910
19.

MASTL overexpression promotes chromosome instability and metastasis in breast cancer.

Rogers S, McCloy RA, Parker BL, Gallego-Ortega D, Law AMK, Chin VT, Conway JRW, Fey D, Millar EKA, O'Toole S, Deng N, Swarbrick A, Chastain PD, Cesare AJ, Timpson P, Caldon CE, Croucher DR, James DE, Watkins DN, Burgess A.

Oncogene. 2018 Aug;37(33):4518-4533. doi: 10.1038/s41388-018-0295-z. Epub 2018 May 10.

20.

Mosquito-Derived Anophelin Sulfoproteins Are Potent Antithrombotics.

Watson EE, Liu X, Thompson RE, Ripoll-Rozada J, Wu M, Alwis I, Gori A, Loh CT, Parker BL, Otting G, Jackson S, Pereira PJB, Payne RJ.

ACS Cent Sci. 2018 Apr 25;4(4):468-476. doi: 10.1021/acscentsci.7b00612. Epub 2018 Mar 28.

21.

DFN-M field characterization of sandstone for a process-based site conceptual model and numerical simulations of TCE transport with degradation.

Pierce AA, Chapman SW, Zimmerman LK, Hurley JC, Aravena R, Cherry JA, Parker BL.

J Contam Hydrol. 2018 May;212:96-114. doi: 10.1016/j.jconhyd.2018.03.001. Epub 2018 Mar 3.

PMID:
29530334
22.

Mitochondrial CoQ deficiency is a common driver of mitochondrial oxidants and insulin resistance.

Fazakerley DJ, Chaudhuri R, Yang P, Maghzal GJ, Thomas KC, Krycer JR, Humphrey SJ, Parker BL, Fisher-Wellman KH, Meoli CC, Hoffman NJ, Diskin C, Burchfield JG, Cowley MJ, Kaplan W, Modrusan Z, Kolumam G, Yang JY, Chen DL, Samocha-Bonet D, Greenfield JR, Hoehn KL, Stocker R, James DE.

Elife. 2018 Feb 6;7. pii: e32111. doi: 10.7554/eLife.32111.

23.

Extracellular Vesicles Provide a Means for Tissue Crosstalk during Exercise.

Whitham M, Parker BL, Friedrichsen M, Hingst JR, Hjorth M, Hughes WE, Egan CL, Cron L, Watt KI, Kuchel RP, Jayasooriah N, Estevez E, Petzold T, Suter CM, Gregorevic P, Kiens B, Richter EA, James DE, Wojtaszewski JFP, Febbraio MA.

Cell Metab. 2018 Jan 9;27(1):237-251.e4. doi: 10.1016/j.cmet.2017.12.001.

24.

Dynamic Metabolomics Reveals that Insulin Primes the Adipocyte for Glucose Metabolism.

Krycer JR, Yugi K, Hirayama A, Fazakerley DJ, Quek LE, Scalzo R, Ohno S, Hodson MP, Ikeda S, Shoji F, Suzuki K, Domanova W, Parker BL, Nelson ME, Humphrey SJ, Turner N, Hoehn KL, Cooney GJ, Soga T, Kuroda S, James DE.

Cell Rep. 2017 Dec 19;21(12):3536-3547. doi: 10.1016/j.celrep.2017.11.085.

25.

Multiplexed Temporal Quantification of the Exercise-regulated Plasma Peptidome.

Parker BL, Burchfield JG, Clayton D, Geddes TA, Payne RJ, Kiens B, Wojtaszewski JFP, Richter EA, James DE.

Mol Cell Proteomics. 2017 Dec;16(12):2055-2068. doi: 10.1074/mcp.RA117.000020. Epub 2017 Oct 5.

26.

The autophagy initiator ULK1 sensitizes AMPK to allosteric drugs.

Dite TA, Ling NXY, Scott JW, Hoque A, Galic S, Parker BL, Ngoei KRW, Langendorf CG, O'Brien MT, Kundu M, Viollet B, Steinberg GR, Sakamoto K, Kemp BE, Oakhill JS.

Nat Commun. 2017 Sep 18;8(1):571. doi: 10.1038/s41467-017-00628-y.

27.

Functional screening in human cardiac organoids reveals a metabolic mechanism for cardiomyocyte cell cycle arrest.

Mills RJ, Titmarsh DM, Koenig X, Parker BL, Ryall JG, Quaife-Ryan GA, Voges HK, Hodson MP, Ferguson C, Drowley L, Plowright AT, Needham EJ, Wang QD, Gregorevic P, Xin M, Thomas WG, Parton RG, Nielsen LK, Launikonis BS, James DE, Elliott DA, Porrello ER, Hudson JE.

Proc Natl Acad Sci U S A. 2017 Oct 3;114(40):E8372-E8381. doi: 10.1073/pnas.1707316114. Epub 2017 Sep 15.

28.

Monitoring the evolution and migration of a methane gas plume in an unconfined sandy aquifer using time-lapse GPR and ERT.

Steelman CM, Klazinga DR, Cahill AG, Endres AL, Parker BL.

J Contam Hydrol. 2017 Oct;205:12-24. doi: 10.1016/j.jconhyd.2017.08.011. Epub 2017 Aug 30.

29.

Tyrosine sulfation modulates activity of tick-derived thrombin inhibitors.

Thompson RE, Liu X, Ripoll-Rozada J, Alonso-García N, Parker BL, Pereira PJB, Payne RJ.

Nat Chem. 2017 Sep;9(9):909-917. doi: 10.1038/nchem.2744. Epub 2017 Mar 20.

PMID:
28837178
30.

Estimating a Representative Value and Proportion of True Zeros for Censored Analytical Data with Applications to Contaminated Site Assessment.

Haslauer CP, Meyer JR, Bárdossy A, Parker BL.

Environ Sci Technol. 2017 Jul 5;51(13):7502-7510. doi: 10.1021/acs.est.6b05385. Epub 2017 Jun 23.

PMID:
28613841
31.

Mammalian target of rapamycin complex 2 regulates muscle glucose uptake during exercise in mice.

Kleinert M, Parker BL, Fritzen AM, Knudsen JR, Jensen TE, Kjøbsted R, Sylow L, Ruegg M, James DE, Richter EA.

J Physiol. 2017 Jul 15;595(14):4845-4855. doi: 10.1113/JP274203. Epub 2017 Jun 11.

32.

Synthesis of rhamnosylated arginine glycopeptides and determination of the glycosidic linkage in bacterial elongation factor P.

Wang S, Corcilius L, Sharp PP, Rajkovic A, Ibba M, Parker BL, Payne RJ.

Chem Sci. 2017 Mar 1;8(3):2296-2302. doi: 10.1039/c6sc03847f. Epub 2016 Dec 12.

33.

Multidimensional Investigation of Bedrock Heterogeneity/Unconformities at a DNAPL-Impacted Site.

Steelman CM, Meyer JR, Parker BL.

Ground Water. 2017 Jul;55(4):532-549. doi: 10.1111/gwat.12514. Epub 2017 Apr 12.

PMID:
28405963
34.

Hyperactivation of the Insulin Signaling Pathway Improves Intracellular Proteostasis by Coordinately Up-regulating the Proteostatic Machinery in Adipocytes.

Minard AY, Wong MK, Chaudhuri R, Tan SX, Humphrey SJ, Parker BL, Yang JY, Laybutt DR, Cooney GJ, Coster AC, Stöckli J, James DE.

J Biol Chem. 2016 Dec 2;291(49):25629-25640. Epub 2016 Oct 13.

35.

mTORC1 Is a Major Regulatory Node in the FGF21 Signaling Network in Adipocytes.

Minard AY, Tan SX, Yang P, Fazakerley DJ, Domanova W, Parker BL, Humphrey SJ, Jothi R, Stöckli J, James DE.

Cell Rep. 2016 Sep 27;17(1):29-36. doi: 10.1016/j.celrep.2016.08.086.

36.

mTORC2 and AMPK differentially regulate muscle triglyceride content via Perilipin 3.

Kleinert M, Parker BL, Chaudhuri R, Fazakerley DJ, Serup A, Thomas KC, Krycer JR, Sylow L, Fritzen AM, Hoffman NJ, Jeppesen J, Schjerling P, Ruegg MA, Kiens B, James DE, Richter EA.

Mol Metab. 2016 Jun 22;5(8):646-655. doi: 10.1016/j.molmet.2016.06.007. eCollection 2016 Aug.

37.

Toward Automated N-Glycopeptide Identification in Glycoproteomics.

Lee LY, Moh ES, Parker BL, Bern M, Packer NH, Thaysen-Andersen M.

J Proteome Res. 2016 Oct 7;15(10):3904-3915. Epub 2016 Sep 2.

PMID:
27519006
38.

Origin of VC-only plumes from naturally enhanced dechlorination in a peat-rich hydrogeologic setting.

Filippini M, Amorosi A, Campo B, Herrero-Martìn S, Nijenhuis I, Parker BL, Gargini A.

J Contam Hydrol. 2016 Sep;192:129-139. doi: 10.1016/j.jconhyd.2016.07.003. Epub 2016 Jul 12.

PMID:
27451056
39.

Reductive dechlorination in recalcitrant sources of chloroethenes in the transition zone between aquifers and aquitards.

Puigserver D, Herrero J, Torres M, Cortés A, Nijenhuis I, Kuntze K, Parker BL, Carmona JM.

Environ Sci Pollut Res Int. 2016 Sep;23(18):18724-41. doi: 10.1007/s11356-016-7068-4. Epub 2016 Jun 17.

PMID:
27314420
40.

CHD4 Is a Peripheral Component of the Nucleosome Remodeling and Deacetylase Complex.

Low JK, Webb SR, Silva AP, Saathoff H, Ryan DP, Torrado M, Brofelth M, Parker BL, Shepherd NE, Mackay JP.

J Biol Chem. 2016 Jul 22;291(30):15853-66. doi: 10.1074/jbc.M115.707018. Epub 2016 May 27.

41.

Integrated expression analysis of muscle hypertrophy identifies Asb2 as a negative regulator of muscle mass.

Davey JR, Watt KI, Parker BL, Chaudhuri R, Ryall JG, Cunningham L, Qian H, Sartorelli V, Sandri M, Chamberlain J, James DE, Gregorevic P.

JCI Insight. 2016 Apr 21;1(5). pii: e85477.

42.

Quantification of Degradation of Chlorinated Hydrocarbons in Saturated Low Permeability Sediments Using Compound-Specific Isotope Analysis.

Wanner P, Parker BL, Chapman SW, Aravena R, Hunkeler D.

Environ Sci Technol. 2016 Jun 7;50(11):5622-30. doi: 10.1021/acs.est.5b06330. Epub 2016 May 18.

PMID:
27153381
43.

The MTA1 subunit of the nucleosome remodeling and deacetylase complex can recruit two copies of RBBP4/7.

Schmidberger JW, Sharifi Tabar M, Torrado M, Silva AP, Landsberg MJ, Brillault L, AlQarni S, Zeng YC, Parker BL, Low JK, Mackay JP.

Protein Sci. 2016 Aug;25(8):1472-82. doi: 10.1002/pro.2943. Epub 2016 May 18.

44.

Proteomic Identification of Putative MicroRNA394 Target Genes in Arabidopsis thaliana Identifies Major Latex Protein Family Members Critical for Normal Development.

Litholdo CG Jr, Parker BL, Eamens AL, Larsen MR, Cordwell SJ, Waterhouse PM.

Mol Cell Proteomics. 2016 Jun;15(6):2033-47. doi: 10.1074/mcp.M115.053124. Epub 2016 Apr 11.

45.

PP1 initiates the dephosphorylation of MASTL, triggering mitotic exit and bistability in human cells.

Rogers S, Fey D, McCloy RA, Parker BL, Mitchell NJ, Payne RJ, Daly RJ, James DE, Caldon CE, Watkins DN, Croucher DR, Burgess A.

J Cell Sci. 2016 Apr 1;129(7):1340-54. doi: 10.1242/jcs.179754. Epub 2016 Feb 12.

46.

Terminal Galactosylation and Sialylation Switching on Membrane Glycoproteins upon TNF-Alpha-Induced Insulin Resistance in Adipocytes.

Parker BL, Thaysen-Andersen M, Fazakerley DJ, Holliday M, Packer NH, James DE.

Mol Cell Proteomics. 2016 Jan;15(1):141-53. doi: 10.1074/mcp.M115.054221. Epub 2015 Nov 4.

47.

Virulence of BotaniGard(®) to Second Instar Brown Marmorated Stink Bug, Halyomorpha halys (Stål) (Heteroptera: Pentatomidae).

Parker BL, Skinner M, Gouli S, Gouli V, Kim JS.

Insects. 2015 Apr 9;6(2):319-24. doi: 10.3390/insects6020319.

48.

JRK is a positive regulator of β-catenin transcriptional activity commonly overexpressed in colon, breast and ovarian cancer.

Pangon L, Ng I, Giry-Laterriere M, Currey N, Morgan A, Benthani F, Tran PN, Al-Sohaily S, Segelov E, Parker BL, Cowley MJ, Wright DC, St Heaps L, Carey L, Rooman I, Kohonen-Corish MR.

Oncogene. 2016 Jun 2;35(22):2834-41. doi: 10.1038/onc.2015.347. Epub 2015 Oct 12.

PMID:
26455321
49.

Global Phosphoproteomic Analysis of Human Skeletal Muscle Reveals a Network of Exercise-Regulated Kinases and AMPK Substrates.

Hoffman NJ, Parker BL, Chaudhuri R, Fisher-Wellman KH, Kleinert M, Humphrey SJ, Yang P, Holliday M, Trefely S, Fazakerley DJ, Stöckli J, Burchfield JG, Jensen TE, Jothi R, Kiens B, Wojtaszewski JF, Richter EA, James DE.

Cell Metab. 2015 Nov 3;22(5):922-35. doi: 10.1016/j.cmet.2015.09.001. Epub 2015 Oct 1. Erratum in: Cell Metab. 2015 Nov 3;22(5):948.

50.

Transport of through a Thick Vadose Zone.

Arnaud E, Best A, Parker BL, Aravena R, Dunfield K.

J Environ Qual. 2015 Sep;44(5):1424-34. doi: 10.2134/jeq2015.02.0067.

PMID:
26436260

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