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Longitudinal Metabolome-Wide Signals Prior to the Appearance of a First Islet Autoantibody in Children Participating in the TEDDY Study.

Li Q, Parikh H, Butterworth MD, Lernmark Å, Hagopian W, Rewers M, She JX, Toppari J, Ziegler AG, Akolkar B, Fiehn O, Fan S, Krischer JP; the TEDDY Study Group; TEDDY Study Group.

Diabetes. 2020 Feb 6. pii: db190756. doi: 10.2337/db19-0756. [Epub ahead of print]


Subconjunctival microinvasive glaucoma surgeries: an update on the Xen gel stent and the PreserFlo MicroShunt.

Do AT, Parikh H, Panarelli JF.

Curr Opin Ophthalmol. 2020 Mar;31(2):132-138. doi: 10.1097/ICU.0000000000000643.


Cost Savings of Carpal Tunnel Release Performed In-Clinic Compared to an Ambulatory Surgery Center: Time-Driven Activity-Based-Costing.

White M, Parikh HR, Wise KL, Vang S, Ward CM, Cunningham BP.

Hand (N Y). 2019 Dec 17:1558944719890040. doi: 10.1177/1558944719890040. [Epub ahead of print]


Outcomes of Quadriceps Tendon With Patellar Bone Block Anterior Cruciate Ligament Reconstruction in Adolescent Patients With a Minimum 2-Year Follow-up.

Gagliardi AG, Carry PM, Parikh HB, Albright JC.

Am J Sports Med. 2020 Jan;48(1):93-98. doi: 10.1177/0363546519885371. Epub 2019 Nov 19.


Plasma ascorbic acid and the risk of islet autoimmunity and type 1 diabetes: the TEDDY study.

Mattila M, Erlund I, Lee HS, Niinistö S, Uusitalo U, Andrén Aronsson C, Hummel S, Parikh H, Rich SS, Hagopian W, Toppari J, Lernmark Å, Ziegler AG, Rewers M, Krischer JP, Norris JM, Virtanen SM; TEDDY Study Group.

Diabetologia. 2020 Feb;63(2):278-286. doi: 10.1007/s00125-019-05028-z. Epub 2019 Nov 14.


Design, synthesis, and evaluation of compounds capable of reducing Pseudomonas aeruginosa virulence.

Hossain MA, Sattenapally N, Parikh HI, Li W, Rumbaugh KP, German NA.

Eur J Med Chem. 2020 Jan 1;185:111800. doi: 10.1016/j.ejmech.2019.111800. Epub 2019 Oct 22.


Physician Behavior Change: A Systematic Review.

Cunningham BP, Bakker CJ, Parikh HR, Johal H, Swiontkowski MF.

J Orthop Trauma. 2019 Nov;33 Suppl 7:S62-S72. doi: 10.1097/BOT.0000000000001616.


Value Denominator: The Fundamentals of Costing for Orthopaedic Surgeons.

Parikh HR, OʼHara N, Levy JF, Cunningham BP.

J Orthop Trauma. 2019 Nov;33 Suppl 7:S56-S61. doi: 10.1097/BOT.0000000000001617.


Patient-Level Value Analysis: An Innovative Approach to Optimize Care Delivery.

McCreary DL, Dugarte AJ, Vang S, Plowman B, Williams BR, Parikh HR, Cunningham BP.

J Orthop Trauma. 2019 Nov;33 Suppl 7:S49-S52. doi: 10.1097/BOT.0000000000001624.


Variation in Implant Selection for Ankle Fractures: Identifying Cost Drivers.

Okelana AB, McMillan LJ, Kibble K, Parikh HR, Gorman C, Schaefbauer H, Cunningham BP.

J Orthop Trauma. 2019 Nov;33 Suppl 7:S26-S31. doi: 10.1097/BOT.0000000000001623.


Does Value Matter in Orthopaedic Trauma?: A Survey of Orthopaedic Trauma Association Members.

Gorman TL, S Albersheim M, Parikh HR, Flagstad IR, Okelana AB, Vang S, Johal H, Cunningham BP.

J Orthop Trauma. 2019 Nov;33 Suppl 7:S21-S25. doi: 10.1097/BOT.0000000000001622.


Cost Variation in Temporizing External Fixation of Tibial Plateau Fractures.

Hayek KR, Parikh HR, McCreary DL, Westberg JR, Mirick G, Baynard T, Schmidt AH, Cunningham BP.

J Orthop Trauma. 2019 Nov;33 Suppl 7:S5-S10. doi: 10.1097/BOT.0000000000001620.


Outcomes of Complex Cataract Surgery in Patients with Primary Open-angle Glaucoma.

Bargoud AR, Parikh H, Kalbag N, Greenberg P, Khouri AS.

J Curr Glaucoma Pract. 2019 May-Aug;13(2):62-67. doi: 10.5005/jp-journals-10078-1250.


Non-invasive platform to estimate fasting blood glucose levels from salivary electrochemical parameters.

Malik S, Parikh H, Shah N, Anand S, Gupta S.

Healthc Technol Lett. 2019 Jul 9;6(4):87-91. doi: 10.1049/htl.2018.5081. eCollection 2019 Aug.


Working memory in action: inspecting the systematic and unsystematic errors of spatial memory across saccades.

Frost A, Tomou G, Parikh H, Kaur J, Zivcevska M, Niemeier M.

Exp Brain Res. 2019 Nov;237(11):2939-2956. doi: 10.1007/s00221-019-05623-x. Epub 2019 Sep 10.


Should We Rethink How to Define Success After ACL Surgery? Response.

Gagliardi AG, Carry PM, Traver JL, Parikh HB, Howell DR, Albright JC.

Am J Sports Med. 2019 Aug;47(10):NP59-NP60. doi: 10.1177/0363546519855359. No abstract available.


The Role of fosA in Challenges with Fosfomycin Susceptibility Testing of Multispecies Klebsiella pneumoniae Carbapenemase-Producing Clinical Isolates.

Elliott ZS, Barry KE, Cox HL, Stoesser N, Carroll J, Vegesana K, Kotay S, Sheppard AE, Wailan A, Crook DW, Parikh H, Mathers AJ.

J Clin Microbiol. 2019 Sep 24;57(10). pii: e00634-19. doi: 10.1128/JCM.00634-19. Print 2019 Oct.


Increased Fecal Lactobacillus Is Associated With a Positive Glucose Hydrogen Breath Test in Bangladeshi Children.

Donowitz JR, Parikh HI, Taniuchi M, Gilchrist CA, Haque R, Kirkpatrick BD, Alam M, Kakon SH, Islam BZ, Afreen S, Kabir M, Nayak U, Colgate ER, Carmolli MP, Petri WA Jr.

Open Forum Infect Dis. 2019 Jun 1;6(7):ofz266. doi: 10.1093/ofid/ofz266. eCollection 2019 Jul.


Racioethnic diversity in the dynamics of the vaginal microbiome during pregnancy.

Serrano MG, Parikh HI, Brooks JP, Edwards DJ, Arodz TJ, Edupuganti L, Huang B, Girerd PH, Bokhari YA, Bradley SP, Brooks JL, Dickinson MR, Drake JI, Duckworth RA 3rd, Fong SS, Glascock AL, Jean S, Jimenez NR, Khoury J, Koparde VN, Lara AM, Lee V, Matveyev AV, Milton SH, Mistry SD, Rozycki SK, Sheth NU, Smirnova E, Vivadelli SC, Wijesooriya NR, Xu J, Xu P, Chaffin DO, Sexton AL, Gravett MG, Rubens CE, Hendricks-Muñoz KD, Jefferson KK, Strauss JF 3rd, Fettweis JM, Buck GA.

Nat Med. 2019 Jun;25(6):1001-1011. doi: 10.1038/s41591-019-0465-8. Epub 2019 May 29.


The vaginal microbiome and preterm birth.

Fettweis JM, Serrano MG, Brooks JP, Edwards DJ, Girerd PH, Parikh HI, Huang B, Arodz TJ, Edupuganti L, Glascock AL, Xu J, Jimenez NR, Vivadelli SC, Fong SS, Sheth NU, Jean S, Lee V, Bokhari YA, Lara AM, Mistry SD, Duckworth RA 3rd, Bradley SP, Koparde VN, Orenda XV, Milton SH, Rozycki SK, Matveyev AV, Wright ML, Huzurbazar SV, Jackson EM, Smirnova E, Korlach J, Tsai YC, Dickinson MR, Brooks JL, Drake JI, Chaffin DO, Sexton AL, Gravett MG, Rubens CE, Wijesooriya NR, Hendricks-Muñoz KD, Jefferson KK, Strauss JF 3rd, Buck GA.

Nat Med. 2019 Jun;25(6):1012-1021. doi: 10.1038/s41591-019-0450-2. Epub 2019 May 29.


Acute Treatment of Open Foot and Ankle Fractures Using a Bioartificial Dermal Regeneration Template and Split-Thickness Skin Grafting: A Report of 2 Cases.

McMillan LJ, Parikh HR, Cunningham BP.

JBJS Case Connect. 2019 Apr-Jun;9(2):e0148. doi: 10.2106/JBJS.CC.18.00148.


Impact of Herpes Simplex Virus Type 2 and Human Immunodeficiency Virus Dual Infection on Female Genital Tract Mucosal Immunity and the Vaginal Microbiome.

Keller MJ, Huber A, Espinoza L, Serrano MG, Parikh HI, Buck GA, Gold JA, Wu Y, Wang T, Herold BC.

J Infect Dis. 2019 Jul 31;220(5):852-861. doi: 10.1093/infdis/jiz203.


Mycobacterium avium Complex Diversity within Lung Disease, as Revealed by Whole-Genome Sequencing.

Operario DJ, Pholwat S, Koeppel AF, Prorock A, Bao Y, Sol-Church K, Scheurenbrand M, Poulter M, Turner S, Parikh HI, Mathers A, Houpt ER.

Am J Respir Crit Care Med. 2019 Aug 1;200(3):393-396. doi: 10.1164/rccm.201903-0669LE. No abstract available.


An open resource for accurately benchmarking small variant and reference calls.

Zook JM, McDaniel J, Olson ND, Wagner J, Parikh H, Heaton H, Irvine SA, Trigg L, Truty R, McLean CY, De La Vega FM, Xiao C, Sherry S, Salit M.

Nat Biotechnol. 2019 May;37(5):561-566. doi: 10.1038/s41587-019-0074-6. Epub 2019 Apr 1.


Don't overlook the little guy: An evaluation of the frequency of small plasmids co-conjugating with larger carbapenemase gene containing plasmids.

Barry KE, Wailan AM, Sheppard AE, Crook D, Vegesana K, Stoesser N, Parikh HI, Sebra R, Mathers AJ.

Plasmid. 2019 May;103:1-8. doi: 10.1016/j.plasmid.2019.03.005. Epub 2019 Mar 27.


Klebsiella quasipneumoniae Provides a Window into Carbapenemase Gene Transfer, Plasmid Rearrangements, and Patient Interactions with the Hospital Environment.

Mathers AJ, Crook D, Vaughan A, Barry KE, Vegesana K, Stoesser N, Parikh HI, Sebra R, Kotay S, Walker AS, Sheppard AE.

Antimicrob Agents Chemother. 2019 May 24;63(6). pii: e02513-18. doi: 10.1128/AAC.02513-18. Print 2019 Jun.


Platypnea-orthodeoxia Syndrome in a Patient with Cryptogenic Liver Cirrhosis: An Elusive Cause of Hypoxemia.

Rojas E, Aktas A, Parikh H, Khawaja US, Pergament K.

Cureus. 2019 Jan 8;11(1):e3846. doi: 10.7759/cureus.3846.


Relationship between vitamin D status and the vaginal microbiome during pregnancy.

Jefferson KK, Parikh HI, Garcia EM, Edwards DJ, Serrano MG, Hewison M, Shary JR, Powell AM, Hollis BW, Fettweis JM, Strauss Iii JF, Buck GA, Wagner CL.

J Perinatol. 2019 Jun;39(6):824-836. doi: 10.1038/s41372-019-0343-8. Epub 2019 Mar 11.


ACL Repair With Suture Ligament Augmentation Is Associated With a High Failure Rate Among Adolescent Patients.

Gagliardi AG, Carry PM, Parikh HB, Traver JL, Howell DR, Albright JC.

Am J Sports Med. 2019 Mar;47(3):560-566. doi: 10.1177/0363546518825255. Epub 2019 Feb 7.


Minimally invasive transgingival implant therapy: A literature review.

Yadav MK, Verma UP, Parikh H, Dixit M.

Natl J Maxillofac Surg. 2018 Jul-Dec;9(2):117-122. doi: 10.4103/njms.NJMS_52_17. Review.


Interpreting Patient-Reported Outcome Results: Is One Minimum Clinically Important Difference Really Enough?

McCreary DL, Sandberg BC, Bohn DC, Parikh HR, Cunningham BP.

Hand (N Y). 2018 Nov 21:1558944718812180. doi: 10.1177/1558944718812180. [Epub ahead of print]


Genomic comparison of Trypanosoma conorhini and Trypanosoma rangeli to Trypanosoma cruzi strains of high and low virulence.

Bradwell KR, Koparde VN, Matveyev AV, Serrano MG, Alves JMP, Parikh H, Huang B, Lee V, Espinosa-Alvarez O, Ortiz PA, Costa-Martins AG, Teixeira MMG, Buck GA.

BMC Genomics. 2018 Oct 24;19(1):770. doi: 10.1186/s12864-018-5112-0.


Serum biomarkers of glucocorticoid response and safety in anti-neutrophil cytoplasmic antibody-associated vasculitis and juvenile dermatomyositis.

Conklin LS, Merkel PA, Pachman LM, Parikh H, Tawalbeh S, Damsker JM, Cuthbertson DD, Morgan GA, Monach PA, Hathout Y, Nagaraju K, van den Anker J, McAlear CA, Hoffman EP.

Steroids. 2018 Dec;140:159-166. doi: 10.1016/j.steroids.2018.10.008. Epub 2018 Oct 21.


Myasthenia gravis crisis coinciding with asthma exacerbation in a patient with recent heroin use: three causes of acute hypercarbic respiratory failure.

Aktas A, Rojas E, Parikh HA, Pergament K.

BMJ Case Rep. 2018 Oct 7;2018. pii: bcr-2018-224176. doi: 10.1136/bcr-2018-224176.


Discovery of rare ancestry-specific variants in the fetal genome that confer risk of preterm premature rupture of membranes (PPROM) and preterm birth.

Modi BP, Parikh HI, Teves ME, Kulkarni R, Liyu J, Romero R, York TP, Strauss JF 3rd.

BMC Med Genet. 2018 Oct 5;19(1):181. doi: 10.1186/s12881-018-0696-4.


Effect of tralokinumab, an interleukin-13 neutralising monoclonal antibody, on eosinophilic airway inflammation in uncontrolled moderate-to-severe asthma (MESOS): a multicentre, double-blind, randomised, placebo-controlled phase 2 trial.

Russell RJ, Chachi L, FitzGerald JM, Backer V, Olivenstein R, Titlestad IL, Ulrik CS, Harrison T, Singh D, Chaudhuri R, Leaker B, McGarvey L, Siddiqui S, Wang M, Braddock M, Nordenmark LH, Cohen D, Parikh H, Colice G, Brightling CE; MESOS study investigators.

Lancet Respir Med. 2018 Jul;6(7):499-510. doi: 10.1016/S2213-2600(18)30201-7. Epub 2018 May 21.


Metabolic pathways and immunometabolism in rare kidney diseases.

Grayson PC, Eddy S, Taroni JN, Lightfoot YL, Mariani L, Parikh H, Lindenmeyer MT, Ju W, Greene CS, Godfrey B, Cohen CD, Krischer J, Kretzler M, Merkel PA; Vasculitis Clinical Research Consortium, the European Renal cDNA Bank cohort, and the Nephrotic Syndrome Study Network.

Ann Rheum Dis. 2018 Aug;77(8):1226-1233. doi: 10.1136/annrheumdis-2017-212935. Epub 2018 May 3.


Stress resistance and lifespan enhanced by downregulation of antimicrobial peptide genes in the Imd pathway.

Lin YR, Parikh H, Park Y.

Aging (Albany NY). 2018 Apr 19;10(4):622-631. doi: 10.18632/aging.101417.


Analysis of essential gene dynamics under antibiotic stress in Streptococcus sanguinis.

El-Rami F, Kong X, Parikh H, Zhu B, Stone V, Kitten T, Xu P.

Microbiology. 2018 Feb;164(2):173-185. doi: 10.1099/mic.0.000595.


Technical Feasibility and Short-Term Outcome of Intracorporeal Hand-Sewn Esophagojejunostomy After Laparoscopic Total Gastrectomy: Our Experience.

Puntambekar S, Badran R, Parikh H, Bansal A, Sharma V, Chitale M, Jadhav S.

Indian J Surg. 2017 Dec;79(6):497-503. doi: 10.1007/s12262-016-1509-7. Epub 2016 May 21.


Mutations in fetal genes involved in innate immunity and host defense against microbes increase risk of preterm premature rupture of membranes (PPROM).

Modi BP, Teves ME, Pearson LN, Parikh HI, Haymond-Thornburg H, Tucker JL, Chaemsaithong P, Gomez-Lopez N, York TP, Romero R, Strauss JF 3rd.

Mol Genet Genomic Med. 2017 Nov;5(6):720-729. doi: 10.1002/mgg3.330. Epub 2017 Aug 23.


A common intronic variant of PARP1 confers melanoma risk and mediates melanocyte growth via regulation of MITF.

Choi J, Xu M, Makowski MM, Zhang T, Law MH, Kovacs MA, Granzhan A, Kim WJ, Parikh H, Gartside M, Trent JM, Teulade-Fichou MP, Iles MM, Newton-Bishop JA, Bishop DT, MacGregor S, Hayward NK, Vermeulen M, Brown KM.

Nat Genet. 2017 Sep;49(9):1326-1335. doi: 10.1038/ng.3927. Epub 2017 Jul 31.


Characterising cis-regulatory variation in the transcriptome of histologically normal and tumour-derived pancreatic tissues.

Zhang M, Lykke-Andersen S, Zhu B, Xiao W, Hoskins JW, Zhang X, Rost LM, Collins I, Bunt MV, Jia J, Parikh H, Zhang T, Song L, Jermusyk A, Chung CC, Zhu B, Zhou W, Matters GL, Kurtz RC, Yeager M, Jensen TH, Brown KM, Ongen H, Bamlet WR, Murray BA, McCarthy MI, Chanock SJ, Chatterjee N, Wolpin BM, Smith JP, Olson SH, Petersen GM, Shi J, Amundadottir L.

Gut. 2018 Mar;67(3):521-533. doi: 10.1136/gutjnl-2016-313146. Epub 2017 Jun 20.


Rapid learning curve assessment in an ex vivo training system for microincisional glaucoma surgery.

Dang Y, Waxman S, Wang C, Parikh HA, Bussel II, Loewen RT, Xia X, Lathrop KL, Bilonick RA, Loewen NA.

Sci Rep. 2017 May 9;7(1):1605. doi: 10.1038/s41598-017-01815-z.


Rare mutations and potentially damaging missense variants in genes encoding fibrillar collagens and proteins involved in their production are candidates for risk for preterm premature rupture of membranes.

Modi BP, Teves ME, Pearson LN, Parikh HI, Chaemsaithong P, Sheth NU, York TP, Romero R, Strauss JF 3rd.

PLoS One. 2017 Mar 27;12(3):e0174356. doi: 10.1371/journal.pone.0174356. eCollection 2017.


Stratification of phaco-trabectome surgery results using a glaucoma severity index in a retrospective analysis.

Roy P, Loewen RT, Dang Y, Parikh HA, Bussel II, Loewen NA.

BMC Ophthalmol. 2017 Mar 21;17(1):30. doi: 10.1186/s12886-017-0421-7.


Functional characterization of a chr13q22.1 pancreatic cancer risk locus reveals long-range interaction and allele-specific effects on DIS3 expression.

Hoskins JW, Ibrahim A, Emmanuel MA, Manmiller SM, Wu Y, O'Neill M, Jia J, Collins I, Zhang M, Thomas JV, Rost LM, Das S, Parikh H, Haake JM, Matters GL, Kurtz RC, Bamlet WR, Klein A, Stolzenberg-Solomon R, Wolpin BM, Yarden R, Wang Z, Smith J, Olson SH, Andresson T, Petersen GM, Amundadottir LT.

Hum Mol Genet. 2016 Nov 1;25(21):4726-4738. doi: 10.1093/hmg/ddw300.


An ensemble micro neural network approach for elucidating interactions between zinc finger proteins and their target DNA.

Dutta S, Madan S, Parikh H, Sundar D.

BMC Genomics. 2016 Dec 22;17(Suppl 13):1033. doi: 10.1186/s12864-016-3323-9.


MeFiT: merging and filtering tool for illumina paired-end reads for 16S rRNA amplicon sequencing.

Parikh HI, Koparde VN, Bradley SP, Buck GA, Sheth NU.

BMC Bioinformatics. 2016 Dec 1;17(1):491.

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