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Items: 1 to 50 of 162

1.

Limited evolutionary conservation of the phenotypic effects of antibiotic resistance mutations.

Apjok G, Boross G, Nyerges Á, Fekete G, Lázár V, Papp B, Pál C, Csörgő B.

Mol Biol Evol. 2019 May 6. pii: msz109. doi: 10.1093/molbev/msz109. [Epub ahead of print]

PMID:
31058961
2.

Enzyme promiscuity shapes adaptation to novel growth substrates.

Guzmán GI, Sandberg TE, LaCroix RA, Nyerges Á, Papp H, de Raad M, King ZA, Hefner Y, Northen TR, Notebaart RA, Pál C, Palsson BO, Papp B, Feist AM.

Mol Syst Biol. 2019 Apr 8;15(4):e8462. doi: 10.15252/msb.20188462.

3.

The FIRST large-scale mapping of radon concentration in soil gas and water in Romania.

Burghele B, Ţenter A, Cucoş A, Dicu T, Moldovan M, Papp B, Szacsvai K, Neda T, Suciu L, Lupulescu A, Maloş C, Florică Ş, Baciu C, Sainz C.

Sci Total Environ. 2019 Jun 15;669:887-892. doi: 10.1016/j.scitotenv.2019.02.342. Epub 2019 Feb 22.

PMID:
30897444
4.

Pathogen diversity drives the evolution of generalist MHC-II alleles in human populations.

Manczinger M, Boross G, Kemény L, Müller V, Lenz TL, Papp B, Pál C.

PLoS Biol. 2019 Jan 31;17(1):e3000131. doi: 10.1371/journal.pbio.3000131. eCollection 2019 Jan.

5.

Phylogenetic barriers to horizontal transfer of antimicrobial peptide resistance genes in the human gut microbiota.

Kintses B, Méhi O, Ari E, Számel M, Györkei Á, Jangir PK, Nagy I, Pál F, Fekete G, Tengölics R, Nyerges Á, Likó I, Bálint A, Molnár T, Bálint B, Vásárhelyi BM, Bustamante M, Papp B, Pál C.

Nat Microbiol. 2019 Mar;4(3):447-458. doi: 10.1038/s41564-018-0313-5. Epub 2018 Dec 17.

PMID:
30559406
6.

Genome-Wide Identification of Direct RTA Targets Reveals Key Host Factors for Kaposi's Sarcoma-Associated Herpesvirus Lytic Reactivation.

Papp B, Motlagh N, Smindak RJ, Jin Jang S, Sharma A, Alonso JD, Toth Z.

J Virol. 2019 Feb 19;93(5). pii: e01978-18. doi: 10.1128/JVI.01978-18. Print 2019 Mar 1.

PMID:
30541837
7.

Expression of calcium pumps is differentially regulated by histone deacetylase inhibitors and estrogen receptor alpha in breast cancer cells.

Varga K, Hollósi A, Pászty K, Hegedűs L, Szakács G, Tímár J, Papp B, Enyedi Á, Padányi R.

BMC Cancer. 2018 Oct 23;18(1):1029. doi: 10.1186/s12885-018-4945-x.

8.

DISTRIBUTION OF RADON GAS IN ROMANIAN SHOW CAVES AND RADIATION SAFETY.

Burghele BD, Cucos A, Papp B, Stetca FA, Mirea I, Constantin S.

Radiat Prot Dosimetry. 2018 Sep 1;181(1):1-5. doi: 10.1093/rpd/ncy091.

PMID:
29897577
9.

Directed evolution of multiple genomic loci allows the prediction of antibiotic resistance.

Nyerges Á, Csörgő B, Draskovits G, Kintses B, Szili P, Ferenc G, Révész T, Ari E, Nagy I, Bálint B, Vásárhelyi BM, Bihari P, Számel M, Balogh D, Papp H, Kalapis D, Papp B, Pál C.

Proc Natl Acad Sci U S A. 2018 Jun 19;115(25):E5726-E5735. doi: 10.1073/pnas.1801646115. Epub 2018 Jun 5.

10.

Antibiotic-resistant bacteria show widespread collateral sensitivity to antimicrobial peptides.

Lázár V, Martins A, Spohn R, Daruka L, Grézal G, Fekete G, Számel M, Jangir PK, Kintses B, Csörgő B, Nyerges Á, Györkei Á, Kincses A, Dér A, Walter FR, Deli MA, Urbán E, Hegedűs Z, Olajos G, Méhi O, Bálint B, Nagy I, Martinek TA, Papp B, Pál C.

Nat Microbiol. 2018 Jun;3(6):718-731. doi: 10.1038/s41564-018-0164-0. Epub 2018 May 24.

11.

The development of a short version of TEMPS-A in Hungarian non-clinical samples.

Lang A, Papp B, Inancsi T, Dome P, Gonda X, Rihmer Z, Belteczki Z.

Neuropsychopharmacol Hung. 2018 Mar;20(1):4-13.

12.

Comparison of pre- and post-transplant sun-safe behavior of kidney transplant recipients: What is needed to improve?

Gellén E, Papp BG, Janka EA, Gáll T, Paragh G, Emri G, Nemes B, Remenyik É.

Photodermatol Photoimmunol Photomed. 2018 Sep;34(5):322-329. doi: 10.1111/phpp.12387. Epub 2018 Apr 6.

PMID:
29575182
13.

High-throughput metabolomic analysis predicts mode of action of uncharacterized antimicrobial compounds.

Zampieri M, Szappanos B, Buchieri MV, Trauner A, Piazza I, Picotti P, Gagneux S, Borrell S, Gicquel B, Lelievre J, Papp B, Sauer U.

Sci Transl Med. 2018 Feb 21;10(429). pii: eaal3973. doi: 10.1126/scitranslmed.aal3973.

14.

Cotranslational protein assembly imposes evolutionary constraints on homomeric proteins.

Natan E, Endoh T, Haim-Vilmovsky L, Flock T, Chalancon G, Hopper JTS, Kintses B, Horvath P, Daruka L, Fekete G, Pál C, Papp B, Oszi E, Magyar Z, Marsh JA, Elcock AH, Babu MM, Robinson CV, Sugimoto N, Teichmann SA.

Nat Struct Mol Biol. 2018 Mar;25(3):279-288. doi: 10.1038/s41594-018-0029-5. Epub 2018 Feb 12.

15.

Hsp70-associated chaperones have a critical role in buffering protein production costs.

Farkas Z, Kalapis D, Bódi Z, Szamecz B, Daraba A, Almási K, Kovács K, Boross G, Pál F, Horváth P, Balassa T, Molnár C, Pettkó-Szandtner A, Klement É, Rutkai E, Szvetnik A, Papp B, Pál C.

Elife. 2018 Jan 29;7. pii: e29845. doi: 10.7554/eLife.29845.

16.

Model-driven discovery of long-chain fatty acid metabolic reprogramming in heterogeneous prostate cancer cells.

Marín de Mas I, Aguilar E, Zodda E, Balcells C, Marin S, Dallmann G, Thomson TM, Papp B, Cascante M.

PLoS Comput Biol. 2018 Jan 2;14(1):e1005914. doi: 10.1371/journal.pcbi.1005914. eCollection 2018 Jan.

17.

A COMPREHENSIVE STUDY OF RESIDENTIAL, GEOGENIC AND WATER RADON IN THE NORTH AREA OF MUREŞ COUNTY, ROMANIA.

Papp B, Cucos Dinu A, Cosma C.

Radiat Prot Dosimetry. 2018 Apr 1;179(1):80-86. doi: 10.1093/rpd/ncx212.

PMID:
29165649
18.

COMPARATIVE STUDY OF RADON AND THORON MEASUREMENTS IN FOUR ROMANIAN SHOW CAVES.

Burghele BD, Cucos A, Papp B, Dicu T, Pressyanov D, Dimitrov D, Dimitrova I, Constantin S.

Radiat Prot Dosimetry. 2017 Nov 1;177(1-2):181-185. doi: 10.1093/rpd/ncx131.

PMID:
28981907
19.

Inhibition of the lytic cycle of Kaposi's sarcoma-associated herpesvirus by cohesin factors following de novo infection.

Toth Z, Smindak RJ, Papp B.

Virology. 2017 Dec;512:25-33. doi: 10.1016/j.virol.2017.09.001.

20.

Underground metabolism: network-level perspective and biotechnological potential.

Notebaart RA, Kintses B, Feist AM, Papp B.

Curr Opin Biotechnol. 2018 Feb;49:108-114. doi: 10.1016/j.copbio.2017.07.015. Epub 2017 Aug 29. Review.

PMID:
28837944
21.

Evolution of complex adaptations in molecular systems.

Pál C, Papp B.

Nat Ecol Evol. 2017 Aug;1(8):1084-1092. doi: 10.1038/s41559-017-0228-1. Epub 2017 Jul 21.

22.

Induction of endoplasmic reticulum calcium pump expression during early leukemic B cell differentiation.

Aït Ghezali L, Arbabian A, Roudot H, Brouland JP, Baran-Marszak F, Salvaris E, Boyd A, Drexler HG, Enyedi A, Letestu R, Varin-Blank N, Papp B.

J Exp Clin Cancer Res. 2017 Jun 26;36(1):87. doi: 10.1186/s13046-017-0556-7.

23.

Drug Repurposing by Simulating Flow Through Protein-Protein Interaction Networks.

Manczinger M, Bodnár VÁ, Papp BT, Bolla SB, Szabó K, Balázs B, Csányi E, Szél E, Erős G, Kemény L.

Clin Pharmacol Ther. 2018 Mar;103(3):511-520. doi: 10.1002/cpt.769. Epub 2017 Jul 29.

24.

Correction: Phenotypic heterogeneity promotes adaptive evolution.

Bódi Z, Farkas Z, Nevozhay D, Kalapis D, Lázár V, Csörgő B, Nyerges Á, Szamecz B, Fekete G, Papp B, Araújo H, Oliveira JL, Moura G, Santos MAS, Székely T Jr, Balázsi G, Pál C.

PLoS Biol. 2017 Jun 20;15(6):e1002607. doi: 10.1371/journal.pbio.1002607. eCollection 2017 Jun.

25.

Phenotypic heterogeneity promotes adaptive evolution.

Bódi Z, Farkas Z, Nevozhay D, Kalapis D, Lázár V, Csörgő B, Nyerges Á, Szamecz B, Fekete G, Papp B, Araújo H, Oliveira JL, Moura G, Santos MAS, Székely T Jr, Balázsi G, Pál C.

PLoS Biol. 2017 May 9;15(5):e2000644. doi: 10.1371/journal.pbio.2000644. eCollection 2017 May. Erratum in: PLoS Biol. 2017 Jun 20;15(6):e1002607.

26.

Erroneous energy-generating cycles in published genome scale metabolic networks: Identification and removal.

Fritzemeier CJ, Hartleb D, Szappanos B, Papp B, Lercher MJ.

PLoS Comput Biol. 2017 Apr 18;13(4):e1005494. doi: 10.1371/journal.pcbi.1005494. eCollection 2017 Apr.

27.

Cooperative Binding of Transcription Factors Orchestrates Reprogramming.

Chronis C, Fiziev P, Papp B, Butz S, Bonora G, Sabri S, Ernst J, Plath K.

Cell. 2017 Jan 26;168(3):442-459.e20. doi: 10.1016/j.cell.2016.12.016. Epub 2017 Jan 19.

28.

No Evidence That Protein Noise-Induced Epigenetic Epistasis Constrains Gene Expression Evolution.

Boross G, Papp B.

Mol Biol Evol. 2017 Feb 1;34(2):380-390. doi: 10.1093/molbev/msw236.

29.

Molecular mechanisms underlying COPD-muscle dysfunction unveiled through a systems medicine approach.

Marín de Mas I, Fanchon E, Papp B, Kalko S, Roca J, Cascante M.

Bioinformatics. 2017 Jan 1;33(1):95-103. doi: 10.1093/bioinformatics/btw566. Epub 2016 Oct 6.

30.

Residential, soil and water radon surveys in north-western part of Romania.

Cucoş Dinu A, Papp B, Dicu T, Moldovan M, Burghele DB, Moraru IT, Tenţer A, Cosma C.

J Environ Radioact. 2017 Jan;166(Pt 2):412-416. doi: 10.1016/j.jenvrad.2016.10.003. Epub 2016 Oct 17.

PMID:
27765433
31.

Antibiotics: New recipe for targeting resistance.

Papp B, Lázár V.

Nat Chem Biol. 2016 Oct 18;12(11):891-892. doi: 10.1038/nchembio.2215. No abstract available.

PMID:
27755526
32.

LANA-Mediated Recruitment of Host Polycomb Repressive Complexes onto the KSHV Genome during De Novo Infection.

Toth Z, Papp B, Brulois K, Choi YJ, Gao SJ, Jung JU.

PLoS Pathog. 2016 Sep 8;12(9):e1005878. doi: 10.1371/journal.ppat.1005878. eCollection 2016 Sep.

33.

Adaptive evolution of complex innovations through stepwise metabolic niche expansion.

Szappanos B, Fritzemeier J, Csörgő B, Lázár V, Lu X, Fekete G, Bálint B, Herczeg R, Nagy I, Notebaart RA, Lercher MJ, Pál C, Papp B.

Nat Commun. 2016 May 20;7:11607. doi: 10.1038/ncomms11607.

34.

Indispensability of Horizontally Transferred Genes and Its Impact on Bacterial Genome Streamlining.

Karcagi I, Draskovits G, Umenhoffer K, Fekete G, Kovács K, Méhi O, Balikó G, Szappanos B, Györfy Z, Fehér T, Bogos B, Blattner FR, Pál C, Pósfai G, Papp B.

Mol Biol Evol. 2016 May;33(5):1257-69. doi: 10.1093/molbev/msw009. Epub 2016 Jan 14.

35.

Multifaceted plasma membrane Ca(2+) pumps: From structure to intracellular Ca(2+) handling and cancer.

Padányi R, Pászty K, Hegedűs L, Varga K, Papp B, Penniston JT, Enyedi Á.

Biochim Biophys Acta. 2016 Jun;1863(6 Pt B):1351-63. doi: 10.1016/j.bbamcr.2015.12.011. Epub 2015 Dec 17. Review.

36.

Dimensions of adult attachment are significantly associated with specific affective temperament constellations in a Hungarian university sample.

Lang A, Papp B, Gonda X, Dome P, Rihmer Z.

J Affect Disord. 2016 Feb;191:78-81. doi: 10.1016/j.jad.2015.11.026. Epub 2015 Nov 24.

PMID:
26655115
37.

High cell density cultivation of the chemolithoautotrophic bacterium Nitrosomonas europaea.

Papp B, Török T, Sándor E, Fekete E, Flipphi M, Karaffa L.

Folia Microbiol (Praha). 2016 May;61(3):191-8. doi: 10.1007/s12223-015-0425-8. Epub 2015 Sep 10.

PMID:
26358065
38.

Selective upregulation of the expression of plasma membrane calcium ATPase isoforms upon differentiation and 1,25(OH)2D3-vitamin treatment of colon cancer cells.

Ribiczey P, Papp B, Homolya L, Enyedi Á, Kovács T.

Biochem Biophys Res Commun. 2015 Aug 14;464(1):189-94. doi: 10.1016/j.bbrc.2015.06.113. Epub 2015 Jun 23.

PMID:
26116539
39.

A deficiency of manganese ions in the presence of high sugar concentrations is the critical parameter for achieving high yields of itaconic acid by Aspergillus terreus.

Karaffa L, Díaz R, Papp B, Fekete E, Sándor E, Kubicek CP.

Appl Microbiol Biotechnol. 2015 Oct;99(19):7937-44. doi: 10.1007/s00253-015-6735-6. Epub 2015 Jun 16.

PMID:
26078111
40.

Collateral sensitivity of antibiotic-resistant microbes.

Pál C, Papp B, Lázár V.

Trends Microbiol. 2015 Jul;23(7):401-7. doi: 10.1016/j.tim.2015.02.009. Epub 2015 Mar 25. Review.

41.

[Psychotherapy and efficacy].

Papp B, Péley B.

Orv Hetil. 2015 Jan 25;156(4):135-40. doi: 10.1556/OH.2015.30068. Review. Hungarian.

PMID:
25597317
42.

Cancer cell metabolism as new targets for novel designed therapies.

Marín de Mas I, Aguilar E, Jayaraman A, Polat IH, Martín-Bernabé A, Bharat R, Foguet C, Milà E, Papp B, Centelles JJ, Cascante M.

Future Med Chem. 2014;6(16):1791-810. Review.

PMID:
25574531
43.

X chromosome reactivation dynamics reveal stages of reprogramming to pluripotency.

Pasque V, Tchieu J, Karnik R, Uyeda M, Sadhu Dimashkie A, Case D, Papp B, Bonora G, Patel S, Ho R, Schmidt R, McKee R, Sado T, Tada T, Meissner A, Plath K.

Cell. 2014 Dec 18;159(7):1681-97. doi: 10.1016/j.cell.2014.11.040.

44.

Testing radon mitigation techniques in a pilot house from Băiţa-Ştei radon prone area (Romania).

Cosma C, Papp B, Cucoş Dinu A, Sainz C.

J Environ Radioact. 2015 Feb;140:141-7. doi: 10.1016/j.jenvrad.2014.11.007. Epub 2014 Dec 4.

PMID:
25483354
45.

The genomic landscape of compensatory evolution.

Szamecz B, Boross G, Kalapis D, Kovács K, Fekete G, Farkas Z, Lázár V, Hrtyan M, Kemmeren P, Groot Koerkamp MJ, Rutkai E, Holstege FC, Papp B, Pál C.

PLoS Biol. 2014 Aug 26;12(8):e1001935. doi: 10.1371/journal.pbio.1001935. eCollection 2014 Aug.

46.

Network-level architecture and the evolutionary potential of underground metabolism.

Notebaart RA, Szappanos B, Kintses B, Pál F, Györkei Á, Bogos B, Lázár V, Spohn R, Csörgő B, Wagner A, Ruppin E, Pál C, Papp B.

Proc Natl Acad Sci U S A. 2014 Aug 12;111(32):11762-7. doi: 10.1073/pnas.1406102111. Epub 2014 Jul 28.

47.

Perturbation of iron homeostasis promotes the evolution of antibiotic resistance.

Méhi O, Bogos B, Csörgő B, Pál F, Nyerges A, Papp B, Pál C.

Mol Biol Evol. 2014 Oct;31(10):2793-804. doi: 10.1093/molbev/msu223. Epub 2014 Jul 24.

48.

Radon and radium concentration in water from North-West of Romania and the estimated doses.

Moldovan M, Benea V, Niţă DC, Papp B, Burghele BD, Bican-Brişan N, Cosma C.

Radiat Prot Dosimetry. 2014 Nov;162(1-2):96-100. doi: 10.1093/rpd/ncu230. Epub 2014 Jul 16.

PMID:
25031036
49.

Genome-wide analysis captures the determinants of the antibiotic cross-resistance interaction network.

Lázár V, Nagy I, Spohn R, Csörgő B, Györkei Á, Nyerges Á, Horváth B, Vörös A, Busa-Fekete R, Hrtyan M, Bogos B, Méhi O, Fekete G, Szappanos B, Kégl B, Papp B, Pál C.

Nat Commun. 2014 Jul 8;5:4352. doi: 10.1038/ncomms5352.

50.

Antagonism between bacteriostatic and bactericidal antibiotics is prevalent.

Ocampo PS, Lázár V, Papp B, Arnoldini M, Abel zur Wiesch P, Busa-Fekete R, Fekete G, Pál C, Ackermann M, Bonhoeffer S.

Antimicrob Agents Chemother. 2014 Aug;58(8):4573-82. doi: 10.1128/AAC.02463-14. Epub 2014 May 27.

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